Indole-3-acetic acid improves Escherichia coli's defences to stress

Archives of Microbiology

Volumn 185, Issue 5, 2006, Pages 373-382

  Bianco, C ^a   Imperlini, E ^a   Calogero, R ^b   Senatore, B ^a   Amoresano, A ^c   Carpentieri, A ^c   Pucci, P ^c   Defez, R ^a  

^a INSTITUTE OF GENETICS AND BIOPHYSICS ADRIANO BUZZATI TRAVERSO   (Italy)

^b SAN LUIGI GONZAGA HOSPITAL   (Italy)

^c UNIVERSITY OF NAPLES FEDERICO II   (Italy)

Author keywords

Biofilm; DnaK; EPS; LPS; Stress response; Trehalose

Indexed keywords

ANTIBIOTIC AGENT; DETERGENT; DYE; ERYTHROMYCIN; EXOPOLYSACCHARIDE; INDOLEACETIC ACID; LIPOPOLYSACCHARIDE; NOVOBIOCIN; PENICILLIN DERIVATIVE; PROTEIN DNAK; RIFAMPICIN; TREHALOSE; VANCOMYCIN;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL MEMBRANE; BIOFILM; COLD STRESS; DNA MICROARRAY; ESCHERICHIA COLI; ESCHERICHIA COLI K 12; GENE EXPRESSION REGULATION; HEAT SHOCK; NONHUMAN; OSMOTIC STRESS; OXIDATIVE STRESS; PRIORITY JOURNAL; STRESS; STRUCTURE ANALYSIS; ULTRAVIOLET IRRADIATION;

ADAPTATION, PHYSIOLOGICAL; ANTI-BACTERIAL AGENTS; BIOFILMS; COLD; COLD TEMPERATURE; DRUG RESISTANCE, BACTERIAL; ESCHERICHIA COLI K12; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION PROFILING; HEAT; HOT TEMPERATURE; HSP70 HEAT-SHOCK PROTEINS; HYDROGEN-ION CONCENTRATION; INDOLEACETIC ACIDS; LIPOPOLYSACCHARIDES; MICROBIAL VIABILITY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OSMOTIC PRESSURE; POLYSACCHARIDES, BACTERIAL; TREHALOSE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; ESCHERICHIA COLI K12;

EID: 33646754939     PISSN: 03028933     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00203-006-0103-y     Document Type: Article

References (47)

1. Ashwell G (1966) Determination of deoxy sugars with 2-thiobarbituric acid. Methods Enzymol 6:89-92
2. Baldi P, Long AD (2001) A bayesian framework for the analysis of microarray expression data: regularized t-test and statistical inferences of gene changes. Bioinformatics 17:509-519
3. Benaroudj N, Lee DH, Goldberg AL (2001) Trehalose accumulation during cellular stress protects cells and cellular proteins from damage by oxygen radicals. J Biol Chem 276:24261-24267
4. Blattner FR, Plunket GR, Bloch CA, Perna NT, Burland V, Riley M et al (1997) The complete genome sequence of Escherichia coli K-12. Science 277:1453-1461
5. Bukau B, Hesterkamp T (1998) Role of DnaK and HscA homologs of Hsp70 chaperones in protein folding in E. coli. EMBO J 17:4818-4828
6. Chang YY, Cronan EJ Jr (1999) Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli. Mol Microbiol 33:249-259
7. Caldas T, Demont-Caulet N, Ghazi A, Richarme G (1999) Thermoprotection by glycine betaine and choline. Microbiology 145:2543-2548
8. Dalle-Donne I, Rossi R, Giustarini D, Milzani A, Colombo R (2003) Protein carbonyl groups as biomarkers of oxidative stress. Clin Chim Acta 329:23-28
9. Davidson EA (1966) Determination of hexosamine. Methods Enzymol 8:56-60
10. De Felice M, Griffo G, Lago TC, Limanuro D, Ricca E (1986) Detection of the acetolactate synthase isoenzyme I of Escherichia coli. Methods Enzymol 166:241-244
11. De Melo MP, De Lima TM, Pithon-Curi TC, Curi R (2004) The mechanism of indole acetic acid cytotoxicity. Toxicol Lett 148:103-111
12. Deng M, Misra R (1996) Examination of asmA and its effect on the assembly of Escherichia coli outer membrane proteins. Mol Microbiol 21:605-612
13. Diamant S, Eliahu N, Rosenthal D, Goloubinoff P (2001) Chemical chaperones regulate molecular chaperones in vitro and in cells under combined salt and heat stresses. J Biol Chem 276:39586-39591
14. Dubois M, Gilles K, Hamilton JK, Rebers PA, Smith F (1951) A colorimetric method for the determination of sugars. Nature 168:167
15. Edwards MD, Booth IR, Miller S (2004) Gating the bacterial mechanosensitive channel: MscS a new paradigm? Curr Opin Microbiol 7:163-167
16. Ebright RH, Beckwith J (1985) The catabolite gene activator protein (CAP) is not required for indole-3-acetic acid to activate transcription of the araBAD operon of Escherichia coli K-12. Mol Gen Genet 201:51-55
17. Echave P, Esparza-Ceròn MA, Cabiscol E, Tamarit J, Ros J, Membrillo-Hernàndez J, Lin ECC (2002) Dank dependence of mutant ethanol oxidoreductases evolved for aerobic function and protective role of the chaperone against protein oxidative damage in Escherichia coli. Proc Natl Acad Sci USA 99:4626-4631
18. Folkes LK, Greco O, Dachs GU, Stratford MRL, Wardman P (2002) 5-Fluoroindole-3-acetic acid: a prodrug activated by a peroxidase with potential for use in target cancer therapy. Biochem Pharmacol 63:265-272
19. Kandror O, Deleon A, Goldberg AL (2002) Trehalose synthesis is induced upon exposure of Escherichia coli to cold and is essential for viability at low temperatures. Proc Natl Acad Sci USA 99:9727-9732
20. Kaushik JK, Bhat R (2003) Why is trehalose an exceptional protein stabilizer? J Biol Chem 278:26458-26465
21. Kende H, Zeevaart JAD (1997) The five 'classical' plant hormones. Plant Cell 9:1197-1210
22. Kline LS, Brown CS, Bankaitis V, Montefiori DC, Craig K (1980) Metabolite gene regulation of the L-arabinose operon in Escherichia coli with indoleacetic acid and other indole derivatives. Proc Natl Acad Sci USA 77:1768-1772
23. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685
24. Leigh AJ, Signer RE, Walker GC (1985) Exopolysaccharide deficient mutants of Rhizobium meliloti that form ineffective nodules. Proc Natl Acad Sci USA 82:6231-6235
25. Lemcke K, Prinsen E, Van Onckelen H, Schmülling T (2000) The ORF8 gene product of Agrobacterium rhizogenes TL-DNA has tryptophan 2-monooxygenase activity. Mol Plant Microbe Interact 13:787-790
26. Leive L (1965) Release of lipopolysaccharide by EDTA treatment of E. coli. Biochem Biophys Res Commun 21:290-296
27. Lillie SH, Pringle JR (1980) Reserve carbohydrate metabolism in Saccharomyces cerevisiae: responses to nutrient limitation. J Bacteriol 143:1384-1394
28. -ΔΔCT method. Methods 25:402-408
29. Lodato P, Se govia de Huergo M, Buera MP (1999) viability and thermal stability of a strain of Saccharomyces cerevisiae freeze-dried in different sugar and polymer matrices. Appl Microbiol Biotechnol 52:215-220
30. Mah TF, Pitts B, Pellock B, Walker GC, Stewart PS, O'Toole GA (2001) A genetic basis for Pseudomonas aeruginosa biofilm antibiotic resistance. Nature 426:306-310
31. Marroquì S, Zorreguieta A, Santamarìa C, Temprano F, Soberòn M, Megìas M, Downie JA (2001) Enhanced symbiotic performance by Rhizobium tropici glycogen synthase mutants. J Bacteriol 183:854-864
32. Morimoto RI (1993) Cells in stress: transcriptional activation of heat shock genes. Science 259:1409-1410
33. Nikaido H (1976) Outer membrane of Salmonella typhimurium: transmembrane diffusion of some hydrophobic substances. Biochim Biophys Acta 433:118-132
34. Osborn MJ (1963) Studies on the gram-negative cell wall. Biochemistry 50:499-506
35. Polissi A, De Laurentis W, Zangrossi S, Briani F, Longhi V, Pesole G, Dehò G (2003) Res Microbiol 154:573-580
36. Prusty R, Grisafi P, Fink GR (2004) The plant hormone indoleacetic acid induces invasive growth in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 101:4153-4157
37. Purvis JE, Yomano LP, Ingram LO (2005) Enhanced trehalose production improves growth of Escherichia coli under osmotic stress. Appl Environ Microbiol 71:3761-3769
38. E regulon identified by a two-plasmid system. FEMS Microbiol Lett 225:1-7
39. Stepanovic S, Vucovic D, Dakin I, Savic B, Svabic-Vlahovic M (2000) A modified microtiter-plate test for quantification of staphylococcal biofilm formation. J Microbiol Methods 40:175-179
40. Saviozzi S, Iazzetti G, Caserta E, Guffanti A, Calogero RA (2004) Microarray data analysis and mining. Methods Mol Med 94:67-90
41. Singer AM, Lindquist S (1998) Thermotolerance in Saccharomyces cerevisiae: the Yin and Yang of trehalose. Trends Biotechnol 16:460-468
42. Sukupolvi S, Vaara M, Helander IL, Viljanen P, Makela H (1984) New Salmonella typhimurium mutants with altered outer membrane permeability. J Bacteriol 159:704-712
43. Tamarit J, Cabiscol E, Ros J (1998) Identification of the major oxidatively damaged proteins in Escherichia coli cells exposed to oxidative stress. J Biol Chem 273:3027-3032
44. Tusher VG, Tibshirani R, Chu G (2001) Significance analysis of microarrays applied to the ionising radiation response. Proc Natl Acad Sci USA 98:5116-5121
45. Yoda K, Kawada T, Kaibara A, Fujie A, Abe M, Hashimoto H et al (2000) Biochi Biotechnol Biochem 64:1937-1941
46. Zimmer W, Wesche M, Timmermans L (1998) Identification and isolation of the indole-3-pyruvate decarboxylase gene from Azospirillum brasilense Sp7: sequencing and functional analysis of the gene locus. Curr Microbiol 36:327-331
47. Zou Y, Crowley DJ, Houten BT (1998) Involvement of molecular chaperonins in nucleotide excision repair. J Biol Chem 276:12887-12892