Application of biotechnology in breeding lentil for resistance to biotic and abiotic stress

Euphytica

Volumn 147, Issue 1-2, 2006, Pages 149-165

  Muehlbauer, Frederick J ^a   Cho, Seungho ^b   Sarker, Ashutosh ^c   McPhee, Kevin E ^a   Coyne, Clarice J ^a   Rajesh, P N ^a   Ford, Rebecca ^d  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

^c INTERNATIONAL CENTER FOR AGRICULTURAL RESEARCH IN THE DRY AREAS ICARDA   (Syrian Arab Republic)

^d UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

Genetic mapping; Genomics; Lens culinaris; Marker assisted selection; Synteny

Indexed keywords

APHIDIDAE; ASCOCHYTA; ASCOCHYTA LENTIS; COLLETOTRICHUM; COLLETOTRICHUM TRUNCATUM; FUSARIUM; FUSARIUM OXYSPORUM; LENS CULINARIS; SCLEROTINIA; SCLEROTINIA SCLEROTIORUM; UROMYCES VICIAE-FABAE;

EID: 33646505767     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-006-7108-0     Document Type: Article

References (146)

1. Abrecht, H., R. Wattiez, J.M. Ruysschaaert & F. Homble, 2000. Purification and characterization of two voltage-dependent anion channel isoforms from plant seeds. Plant Physiol 124: 1181-1190.
2. Ahmed, S. & R.A.A. Morrall, 1996. Field reactions of lentil lines and cultivars to isolates of Ascochyta fabae f. sp. lentis. Can J Plant Path 18: 362-369.
3. Ahmed, S., R.A.A. Morrall & J.W. Sheard, 1996. Virulence of Ascochyta fabae f. sp. lentis on lentil. Can J Plant Path 18: 354-361.
4. Andrahennadi, C.P., A.E. Slinkard & A. Vandenberg, 1996. Ascochyta resistance in lentil. LENS Newslett 23: 5-7.
5. Ashraf, M. & A. Waheed, 1990. Screening of local/exotic accessions of lentil (Lens culinaris Medic.) for salt tolerance at two growth stages. Plant Soil 128: 167-176.
6. Ashraf, M. & A. Waheed, 1993. Responses of some local/exotic accessions of lentil (Lens culinaris Medic.) to salt stress. Crop Sci 170: 103-112.
7. Bachem, C.W.B., R.S. vander Hoeven, S.M. deBruijn, D. Vreugdenhil, M. Zabeau & R.G.F. Visser, 1996. Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: Analysis of gene expression during potato tuber development. Plant J 9: 745-753.
8. Barzen, E., W. Mechelke, E. Ritter, E. Schulte-Kappert & F. Salamini, 1995. An extended map of the sugar beet genome containing AFLP and RFLP loci. Theor Appl Genet 90: 189-193.
9. Becher, M., I.N. Talke, L. Krall & U. Krämer, 2003. Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Ambidopsis halleri. Plant J 37: 251-268.
10. Berry, S.T., A.J. Leon, C.C. Hanfrey, P. Challis, A. Burkholz, S.J. Barnes, G.K. Rufener, M. Lee & P.D.S. Caligari, 1995. Molecular marker analysis of Helianthus annuus L. 2. Construction of an RFLP linkage map for cultivated sunflower. Theor Appl Genet 91: 195-199.
11. Bevan, M., K. Mayer, O White, J.A. Eisen, D. Preuss, T. Bureau, S.L. Salzberg, & H.-W. Mewes, 2001. Sequence and analysis of the Arabidopsis genome. Curr Opin in Plant Biol 4: 105-110.
12. Blanchard, A.P. & S.H. Friend, 1999. Cheap DNA arrays - it's not all smoke and mirrors. Nat Biotech 17: 953.
13. Brachmann, A.J. Konig, C. Julius & M. Feldbrugge, 2004. A reverse genetic approach for generating gene replacement mutants in Ustilago maydis. Mol Gen Genom 272: 216-226.
14. Buddenhagen, I.W. & R.A. Richards, 1988. Breeding cool season food legumes for improved performance in stress environments. In: R.J. Summerfield (Ed.), World Crops: Cool Season Food Legumes, pp. 81-95. Kluwer Academic Publishers, The Netherlands.
15. Caldwell, D.G., N. McCallum, P. Shaw, G.J. Muehlbauer, D.F. Marshall & R. Waugh, 2004. A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.). Plant J 40: 143-150.
16. Chen, J.J.W., R. Wu, P.C. Yang, J.Y. Huang, Y.P. Sher, M.H. Han, W.C. Kao, P.J. Lee, T.F. Chiu, F. Chang, Y.W. Chu, C.W. Wu & K. Peck, 1998. Profiling expression patterns and isolating differentially expressed genes by cDNA microarray system with colorimetry detection. Genomics 51: 313-324.
17. Chowdhury, M.A., C.P. Andrahennadi, A.E. Slinkard & A. Vandenberg, 2001. RAPD and SCAR markers for resistance to ascochyta blight in lentil. Euphytica 118: 331-337.
18. Christou P., 1997. Biotechnology applied to grain legumes. Field Crops Res 53: 83-97.
19. Close, T.J., S.I. Wanamaker, R.A. Caldo, S.M. Turner, D.A. Ashlock, J.A. Dickerson, R.A. Wing, G.J. Muehlbauer, A. Kleinhofs & R.P. Wise, 2004. A new resource for cereal genomics: 22k barley genechip comes of age. Plant Physiol 134: 960-968.
20. Cho, S., W. Chen & F.J. Muehlbauer, 2005. Constitutive expression of the Flavanone 3-hydroxylase gene related to pathotype-specific ascochyta blight resistance in Cicer arietinum L. Physiol Mol Plant Path 67: 100-107.
21. Colbert, T., B.J. Till, R. Tompa, S. Reynolds, M.N. Steine, A.T. Yeung, C.M. McCallum, L. Comai & S. Henikoff, 2001. High throughput screening for induced point mutations. Plant Physiol 126: 480-484.
22. Collard, B.C.Y., E.C.K. Pang, P.K. Ades & P.W.J. Taylor, 2003. Preliminary investigation of QTLs associated with seedling resistance to ascochyta blight from Cicer echinospermum, a wild relative of chickpea. Theor Appl Genet 107: 719-729.
23. Cubero, J.I., 1981. Origin, taxonomy and domestication. In: C. Webb & G. Hawtin (Eds.), Lentils, pp. 15-38. CAB, Slough, UK.
24. Donson, J., Y.W. Fang, G. Espiritu-Santo, W.M. Xing, A. Salazar, S. Miyamoto, V. Armendarez & W. Volkmuth, 2002. Comprehensive gene expression analysis by transcript profiling. Plant Mol Biol 48: 75-97.
25. Durán, Y., R. Fratini, P. García & M. Pérez de la Vega, 2004. An intersubspecific genetic map of Lens. Theor Appl Genet 108: 1265-1273.
26. Durán, Y., R. Fratini, S. Morales, M. Fernández, P. García & M. Pérez de la Vega, 2002. A genetic map of lentil. First International Conference on Legume Genomics and Genetics: Translation to Crop Improvement, June 2-6, 2002, Minneapolis-St. Paul, MN.
27. El Yahyaoui, F., H. Küster, B.B. Amor, N. Hohnjec, A. Pühler, A. Becker, J. Gouzy, T. Vernié, C. Gough, A. Niebel, L. Godiard & P. Gamas, 2004. Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program. Plant Physiol 136: 3159-3176.
28. Endo, M., H. Matsubara, T. Kokubun, H. Masuko, Y. Takahata, T. Tsuchiya, H. Fukuda, T. Demura & M. Watanabe, 2002. The advantages of cDNA microarray as an effective tool for identification of reproductive organ-specific genes in a model legume, Lotus japonicus. FEBS Lett 13; 514(2-3): 229-237.
29. Erskine, W., 1997. Lessons for breeders from land races of lentil. Euphytica 93: 107-112.
30. Erskine, W., & M.C. Saxena, 1993. Problems and prospects of stress resistance breeding in lentil. In: K.B. Singh & M.C. Saxena (Eds.), Breeding for Stress Tolerance in Cool-Season Food Legumes, pp. 56-62. Wiley.
31. Erskine, W., & A. Sarker, 1997. Lentil: The Bangladesh breakthrough. Caravan 6: 8-9.
32. Erskine, W., K. Myveci & N. Izgin, 1981. Screening a world lentil collection for cold tolerance. LENS Newsletter 8: 5-8.
33. Erskine, W., N.P. Saxena & M.C. Saxena, 1993. Iron Deficiency in lentil: Yield loss and geographic distribution in a germplasm collection. Plant Soil 15: 249-254.
34. Erskine, W., R.H. Ellis, R.J. Summerfield, E.H. Roberts & A. Hussain, 1990. Characterisation of responses to temperature and photoperiod for time to flowering in a world lentil collection. Theor Appl Genet 80: 193-199.
35. Erskine, W., A. Hussain, M. Tahir, A. Bahksh, R.H. Ellis, R.J. Summerfield & E.H. Roberts, 1994a. Field evaluation of a model of photothermal flowering responses in a world lentil collection. Theor Appl Genet 88: 423-428.
36. Erskine, W., M. Tufail, A. Russell, M.C. Tyagi, M.M. Rahman & M.C. Saxena, 1994b. Current and future strategies in breeding lentil for resistance to biotic and abiotic stresses. Euphytica 73: 127-135.
37. 2 segregation. Euphytica 96: 405-412.
38. Eujayl, I., M. Baum, W. Powell, W. Erskine & E. Pehu, 1998a. A genetic linkage map of lentil (Lens sp.) based on RAPD and AFLP markers using recombinant inbred lines. Theor Appl Genet 97: 83-89.
39. Eujayl, I., W. Erskine, B. Bayaa, M. Baum, E. Pehu, 1998b. Fusarium vascular wilt in lentil: Inheritance and identification of DNA markers for resistance. Plant Breed 117: 497-499.
40. Eujayl, I., W. Erskine, M. Baum & E. Pehu, 1999. Inheritance and linkage analysis of frost injury in lentil. Crop Sci 39: 639-642.
41. FAOSTAT data, 2005 http://faostat.fao.org/faostat/collections? version = ext&hasbulk = 0&subset = agriculture.
42. Fedorova M., J. van de Mortel, P.A. Matsumoto, J. Cho, C.D. Town, K.A. VandenBosch, J.S. Gantt & C.P. Vance, 2002. Genome-Wide identification of nodule-specific transcripts in the model legume M. truncatula. Plant Physiol 130: 519-537.
43. Feldmann, K.A., 1991. T-DNA insertion mutagenesis in Arabidopsis- mutational spectrum. Plant J 1: 71-82.
44. Ferguson, M.E. & W. Erskine, 2001. Lentils (Lens L.). In: N. Maxted & S.J.Bennett (Eds.), Plant Genetic Resources of Legumes in the Mediterranean, pp. 125-131. Kluwer Academic Publishers, Dordrecht, The Netherlands.
45. Ferguson, M.E., N. Maxted, M. van Slageren & L.D. Robertson, 2000. A re-assessment of the taxonomy of Lens Mill. (Leguminosae, Papilionoideae, Vicieae). Bot J Linn Soc 133: 41-59.
46. Flint-Garcia, S.A., J.M. Thomsberry & E.S. Buckler, 2003. Structure of linkage disequilibrium in plants. Annu Rev Plant Biol 54:357-374.
47. Ford, R., P. Garnier-Géré, M. Nasir & P.W.J. Taylor, 2000. The structure of A. lentis in Australia revealed with RAPD markers. Aust Plant Path 29: 36-45.
48. Ford, R., E.C.K. Pang & P.W.J. Taylor, 1997. Diversity analysis and species identification in Lens using PCR generated markers. Euphytica 96: 247-255.
49. Ford, R., E.C.K. Pang & P.W.J Taylor, 1999. Genetics of resistance to ascochyta blight (A. lentis) of lentil and the identification of closely linked RAPD markers. Theor Appl Genet 98: 93-98.
50. Galasso, I., T. Schmidt & D. Pignone, 2001. Identification of Lens culinaris ssp. culinaris chromosomes by physical mapping of repetitive DNA sequences. Chrom Res 9: 199-209.
51. Gale, M.D., & J.R. Witcombe, 1992. DNA markers and marker-mediated applications in plant breeding, with particular reference to pearl millet breeding. In: J.P. Moss (Ed.), Biotechnology and Crop Improvement in Asia, pp. 323-332. ICRISAT, Patancheru.
52. Gebhardt, C., A. Ballvora, B. Walkemeir, P. Oberhagemann & K. Schuler, 2004. Assessing genetic potential in germplasm collections of crop plants by marker-trait association: A case study for potatoes with quantitative variation of resistance to late blight and maturity type. Mol Breed 13: 93-102.
53. Goff, S., D. Ricke, T.-H. Lan, G. Presting, R. Wang, M. Dunn, J. Glazebrook, A. Sessions, P. Oeller & H. Varma, 2002. A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science 296: 92-100.
54. Gu, W.K., N.F. Weeden, J. Yu & D.H. Wallace, 1995. Large-scale, cost-effective screening of PCR products in marker-assisted selection applications. Theor Appl Genet 91: 465-470.
55. Gulati, A., P. Schryer & A. McHughen, 2002. Production of fertile transgenic lentil (Lens culinaris Medik.) plants using particle bombardment. In Vitro Cell Dev Biol Plant 38: 316-324.
56. Gutierrez, M.V., M.C.V. Patto, T. Huguet, J.I. Cubero, M.T. Moreno & A.M. Torres, 2005. Cross-species amplification of Medicago truncatula microsatellites across three major pulse crops. Theor Appl Genet 110: 1210-1217.
57. Hall, K.J., J.S. Parker & T.H.N. Ellis, 1997a. The relationship between genetic and cytogenetic maps of pea. I. Standard and translocation karyotypes. Genome 40: 744-754.
58. Hall, K.J., J.S. Parker, T.H.N. Ellis, L. Turner, M.R. Knox , J.M.I. Hofer, J. Lu, C. Ferrandiz, P.J. Hunter, J.D. Taylor & K. Baird, 1997b. The relationship between genetic and cytogenetic maps of pea. II. Physical maps of linkage mapping populations. Genome 40: 755-769.
59. Hamwieh, A., W. Choumane, S.M. Udapa, F. Dreyer, C. Jung & M. Baum, 2004. Development of microsatellite markers for the genus Lens. Final Abstracts Guide, Plant and Animal Genome XII Conference, p. 135.
60. Hamwieh, A., S.M. Udapa, W. Choumane, A. Sarker, F. Dreyer, C. Jung & M. Baum, 2005. A genetic linkage map of lentil based on microsatellite and AFLP markers and localization of Fusarium vascular wilt resistance. Theor Appl Genet 110: 669-677.
61. Havey, M.J. & F.J. Muehlbauer, 1989. Linkages between restriction fragment length, isozyme, and morphological markers in lentil. Theor Appl Genet 77: 395-401.
62. Henikoff, S., B.J. Till & L. Comai, 2004. Tilling. Traditional mutagenesis meets functional genomics. Plant Physiol 135: 630-636.
63. Hobson, K., R. Armstrong, D. Connor, M. Nicolas & M. Materne, 2003. Genetic variation in tolerance to high concentrations of soil boron exists in lentil germplasm. In: Solutions for a better environment. Proceedings of the 11th Australian Agronomy Conference, Victoria, Australia.
64. ICARDA, 2004. Celebration as Bangladesh produces more lentil. Caravan 20/21: 11-12.
65. Jana, M.K. & A.E. Slinkard, 1979. Screening for salt tolerance in lentils. LENS Newslett 6: 25-27.
66. Jarvis, P., C. Lister, V. Szabó & C. Dean, 1994. Integration of CAPS markers into the RFLP map generated using recombinant inbred lines of Arabidopsis thaliana. Plant Mol Biol 24: 685-687.
67. Jenczewski, E., M. Gherardi, I. Bonnin, J.M. Prosperi, I. Olivieri & T. Huguet, 1997. Insight on segregation distortions in two intraspecific crosses between annual species of Medicago (Leguminosae). Theor Appl Genet 94: 682-691.
68. Johansen, C., B. Baldev, J.B. Brouwer, W. Erskine, W.A. Jermyn, L. Li-Juan, B.A. Malik, A. Ahad Miah & S.N. Silim. 1994. Biotic and abiotic stresses constraining productivity of cool season food legumes in Asia, Africa and Oceania. In: F.J. Muehlbauer & K.J. Kaiser (Eds.), Expanding the Production and Use of Cool Season Food Legumes, pp. 175-194. Kluwer Academic Publishers, Dordrecht, The Netherlands.
69. Kahraman, A., I. Kusmenoglu, N. Aydin, A. Aydogan, W. Erskine & F.J. Muehlbauer, 2004a. Genetics of winter hardiness in 10 lentil recombinant inbred line populations. Crop Sci 44: 5-12.
70. Kahraman, A., I. Kusmenoglu, N. Aydin, A. Aydogan, W. Erskine & F.J. Muehlbauer, 2004b. QTL mapping of winter hardiness genes in lentil. Crop Sci 44: 13-22.
71. Kanazin, V., L.F. Marek & R.C. Shoemaker, 1996. Resistance gene analogs are conserved and clustered in soybean. PNAS USA 93: 11746-11750.
72. Katerji, N., J.W. van hoorn, A. Hamdy, M. Mastrorilli, T. Oweis & W. Erskine, 2001. Salinity effect on crop development and yield analysis of salt tolerance according to several classification methods. Agric Water Manage 62: 37-66.
73. Katerji, N., J.W. van hoorn, A. Hamdy & M. Mastrorilli, 2003. Salinity effect on crop development and yield analysis of salt tolerance according to several classification methods. Agric Water Manage 62: 37-66.
74. Kempin, S.A., S.J. Liljegren, L.M. Block, S.D. Rounsley, M.F. Yanofsky & E. Lam, 1997. Targeted disruption in Arabidopsis. Nature 389: 802-803.
75. Khare, M.N., 1981. Diseases of lentil. In: C. Webb & G. Hawtin (Eds.), Lentils, p. 216. Wallingford, United Kingdom, CAB International.
76. Kraft, J.M., M.P. Haware & M.M. Hussein, 1988. Root rot and wilt diseases of food legumes. In: R.J. Summerfield (Ed.), World Crops: Cool Season Food legumes, pp. 565-575. Kluwer Academic Publishers, The Netherlands.
77. Kraft, J.M., M.P. Haware, R.M. Jimenez-Diaz, B. Bayaa & M. Harrabi, 1994. Screening techniques and sources of resistance to root rots and wilts in cool season food legumes. In: F.J. Muehlbauer & W.J. Kaiser (Eds.), Expanding the Production and use of Cool Season Food Legumes, pp. 268-289. Kluwer Academic Publishers, Dordrecht, The Netherlands.
78. Krysan, P.J., J.C. Young, P.J. Jester, S. Monson, G. Copenhaver, D. Preuss & M.R. Sussman, 2002. Characterization of T-DNA insertion sites in Arabidopsis thaliana and the implications for saturation mutagenesis. OMICS 6: 163-174.
79. Kuhn, E., 2001. From library screening to microarray technology: Strategies to determine gene expression profiles and to identify differentially regulated genes in plants. Ann Bot 87: 139-155.
80. Kuster, H., N. Hohnjec, F. Krajinski, F. El Yahyaoui, K. Manthey, J. Gouzy, M. Dondrup, F. Meyer, J. Kalinowski, L. Brechenmacher, D. van Tuinen, V. Gianinazzi-Pearson, A. Puhler, P. Gamas & A. Becker, 2004. Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula. J Biotech 108: 95-113.
81. Ladizinsky G., 1979. The origin of lentil and its wild gene pool. Euphytica 28: 179-187.
82. Ladizinsky, G., 1999. Identification of the lentil's wild genetic stock. Genet Resour Crop Evol 46: 115-118.
83. Ladizinsky, G., D. Cohen & F.J. Muehlbauer, 1985. Hybridization in the genus Lens by means of embryo culture. Theor Appl Genet 70: 97-101.
84. Laucou, V., K. Haurogné, N. Ellis & C. Rameau, 1998. Genetic mapping in pea. 1. RAPD-based genetic linkage map of Pisum sativum. Theor Appl Genet 97: 905-915.
85. Leister, D., A. Ballvora, F. Salamini & C. Gebhardt, 1996. A PCR-based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Nat Genet 14:421-429.
86. Liang, P. & A.B. Pardee, 1992. Differential display of eukaryotic messenger-RNA by means of the polymerase chain-reaction. Science 257: 967-971.
87. Lorieux, M., B. Goffinet, X. Perrier, D. Gonzalez de Leon & C. Lanaud, 1995. Maximum-likelihood models for mapping genetic markers showing segregation distortion. 1. Backcross populations. Theor Appl Genet 90: 73-80.
88. Maguire, T.L., S. Grimmond, A. Forrest, I. Iturbe-Ormaetxe, K. Meksem & P.M. Gresshoff, 2002. Tissue-specific gene expression in soybean (Glycine max) detected by cDNA microarray analysis, J Plant Physiol 159: 1361-1374.
89. Mahmoudian, M., M. Yuecel & H.A. Oektem, 2002. Transformation of lentil (Lens culinaris M.) cotyledonary nodes by vacuum infiltration of Agrobacterium tumafaciens. Plant Mol Biol Reptr 20: 251-257.
90. McCallum, C.M., L. Comai, E.A. Greene & S. Henikoff, 2000. Targeted screening for induced mutations. Nat Biotech 18: 455-457.
91. Michelmore, R.W., I. Paran & R.B. Kesseli, 1991. Identification of markers linked to disease-resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations. PNAS USA 88: 9828-9832.
92. Mitra, R.M., S.L. Shaw & S.R. Long, 2004. Six nonnodulating plant mutants defective for Nod factor-induced transcriptional changes associated with the legume-rhizobia symbiosis. PNAS 101: 10217-10222.
93. Monti, L, A.J. Biddle, M.T. Moreno & P. Plancquaert, 1994. Biotic and abiotic stresses of pulse crops in Europe. In: F.J. Muehlbauer & K.J. Kaiser (Eds.), Expanding the Production and Use of Cool Season Food Legumes, pp. 204-218. Kluwer Academic Publishers, Dordrecht, The Netherlands.
94. Moody, D.E., Z. Zou & L. McIntyre, 2002. Cross-species hybridization of pig RNA to human nylon microarrays. BMC Genomics 3: 27.
95. Muehlbauer, F.J. & K.E. McPhee, 2002. Future of North American lentil production. In: J.B. Brouwer (Ed.), Proceedings of Lentil Focus 2002 meeting Horsham, Victoria, Australia.
96. Muehlbauer, F.J., N.F. Weeden & D.L. Hoffman, 1989. Inheritance and linkage relationships of morphological and isozyme loci in lentil (Lens Miller). J Hered 80: 298-303.
97. Nacry, P., C. Camilleri, B. Courtial, M. Caboche & D. Bouchez, 1998. Major chromosomal rearrangements induced by T-DNA transformation in Arabidopsis. Genetics 149: 641-650.
98. Neale, D.B. & O. Savolainen, 2004. Association genetics of complex traits in conifers. Trends Plant Sci 325-330.
99. Negussie, T., Z.A. Pretorius & C.M. Bender, 1998. Components of rust resistance in lentil. Euphytica 142: 55-64.
100. Nguyen, T.T., P.W.J. Taylor, J.B. Brouwer, E.C.K Pang & R. Ford, 2001. A novel source of resistance in lentil (Lens culinaris ssp. culinaris) to ascochyta blight caused by A. lentis. Aust Plant Path 30: 211-215.
101. Paterson, A.H., S.D. Tanksley & M.E. Sorrells, 1991. DNA markers in plant improvement. Adv Agron 46: 39-90.
102. Paran, I. & R.W. Michelmore, 1993. Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce. Theor Appl Genet 85: 985-993.
103. Patil, P.B., P.L. Vrinten, G.J. Scoles & A.E. Slinkard, 1995. Variation in the ribosomal RNA units of the genera Lens and Cicer. Euphytica 83: 33-42.
104. Perry, J.A., T.L. Wang, T.J. Welham, S. Gardner, J.M. Pike, S. Yoshida & M. Parniske, 2003. A tilling reverse genetics tool and a web-accessible collection of mutants of the legume Lotus japonicus. Plant Physiol 131: 866-871.
105. Popelka, J.C., N. Terryn & T.J.V. Higgins, 2004. Gene technology for grain legumes: Can it contribute to the food challenge in developing countries? Plant Sci 167: 195-206.
106. Pritchard, J.K., M. Stephens & P. Donnelly, 2000. Association mapping in structured populations. Am J Hum Genet 67: 170-181.
107. Quillet, M.C., N. Madjidian, Y. Griveau, H. Serieys, M. Tersac, M. Lorieux & A. Bervillé, 1995. Mapping genetic factors controlling pollen viability in an interspecific cross in Helianthus sect. Helianthus. Theor Appl Genet 91: 1195-1202.
108. Rai, R., S.K.T. Nasar, S.J. Singh & V. Prasad, 1985. Interactions between Rhizobium strains and lentil (Lens culinaris Linn.) genotypes under salt stress. J Agric Sci 104: 199-205.
109. 2 fixation in normal and sodic soils. Biol Fert Soils 29: 187-195.
110. Rubeena, R. Ford & P.W.J. Taylor, 2003. Construction of an intraspecific linkage map of lentil (Lens culinaris ssp. culinaris). Theor Appl Genet 107: 910-916.
111. Sarker, R.H., A. Biswas, B.M. Mustafa, S. Mahbub & M.I. Hoque, 2003. Agrobacterium-mediated transformation of lentil (Lens culinaris Medik.). Plant Tissue Cult 13: 1-12.
112. Saxena, M.C., 1993. The challenge of developing biotic and abiotic stress resistance in cool-season food legumes. In: K.B. Singh & M.C. Saxena (Eds.), Breeding for Stress Tolerance in Cool-Season Food Legumes, pp. 3-14. Wiley, Chichester, United Kingdom.
113. Schena, M., D. Shalon, R. Heller, A. Chai, P.O. Brown & R.W. Davis, 1996. Parallel human genome analysis: Microarray-based expression monitoring of 1000 genes. PNAS USA 93: 10614-10619.
114. Sha, Y., S. Li, Z. Pei, L. Luo, Y. Tian & C. He, 2004. Generation and flanking sequence analysis of a rice T-DNA tagged population. Theor Appl Genet 108: 306-314.
115. Sharma, S.K., M.R. Knox & T.H.N. Ellis, 1996. AFLP analysis of the diversity and phylogeny of Lens and its comparison with RAPD analysis. Theor Appl Genet 93: 751-758.
116. Simon, C.J. & R.M. Hannan, 1995. Development and use of core subsets of cool-season food legume germplasm collections. Hort Sci 30: 907.
117. Simon, C.J. & F.J. Muehlbauer, 1997. Construction of a chickpea linkage map and its comparison with maps of pea and lentil. J Hered 88: 115.
118. Singh, K.B. & M.C. Saxena (Eds.), 1993. Breeding for Stress Tolerance in Cool-Season Food Legumes, pp. 474. Wiley, Chichester, United Kingdom.
119. Slinkard, A.E., G. Bascur & G. Hernandez-Bravo. 1994. Biotic and abiotic stresses of cool season food legumes in the western hemisphere. In: F.J. Muehlbauer & K.J. Kaiser (Eds.), Expanding the Production and Use of Cool Season Food Legumes, pp. 195-203. Kluwer Academic Publishers, Dordrecht, The Netherlands.
120. Spaeth, S.C., & F.J. Muehlbauer, 1991. Registration of three germplasms of winter hardy lentil. Crop Sci 31: 1395.
121. Tadmor, Y., D. Zamir & G. Ladizinsky, 1987. Genetic mapping of an ancient translocation in the genus Lens. Theor Appl Genet 73: 883-892.
122. Tahir, M. & F.J. Muehlbauer, 1994. Gene mapping in lentil with recombinant inbred lines. J Hered 85: 306-310.
123. Tahir, M, C.J. Simon & F.J. Muehlbauer, 1993. Gene map of lentil: A review. LENS Newslett 20: 3-10.
124. Tanksley, S.D., M.W. Ganal, J.P. Prince, M.C. de Vicente, M.W. Bonierbale, P. Broun, T.M. Fulton, J.J. Giovannoni, S. Grandillo, G.B. Martin, R. Messeguer, J.C. Miller, L. Miller, A.H. Paterson, O. Pineda, M.S. Röder, R.A. Wing, W. Wu & N.D. Young, 1992. High density molecular linkage maps of the tomato and potato genomes. Genetics 132: 1141-1160.
125. Tar'an, B., L. Buchwaldt, A. Tullu, S. Banniza, T.D. Warkentin & A. Vandenberg, 2003. Using molecular markers to pyramid genes for resistance to ascochyta blight and anthracnose in lentil (Lens culinaris Medik.). Euphytica 134: 223-230.
126. Thibaud-Nissen, F., R.T. Shealy, A. Khanna & L.O. Vodkin, 2003. Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol 132: 118-136.
127. Thornsbury, J.M., M.M. Goodman, J. Doebley, S. Kresovich, D. Nielsen & E.S. Buckler, 2001. Dwarf polymorphisms associate with variation in flowering time. Nat Genet 28: 286-289.
128. Tissier, A.F., S. Marillonnet, V. Klimyuk, K. Patel, M.A. Torres, G. Murphy & J.D.G. Jones, 1999. Multiple independent defective suppressor-imitator transposon insertions in Arabidopsis: A tool for functional genomics. Plant Cell 11: 1841-1852.
129. Tullu, A., T. Buchwaldt, T. Warkentin, B. Taran & A. Vandenberg, 2003. Genetics of resistance to anthracnose and identification of AFLP and RAPD markers linked to the resistance gene in PI 320937 germplasm of lentil (Lens culinaris Medikus). Theor Appl Genet 106: 428-434.
130. Turner, N.C., G.C. Wright & K.H.M. Siddique, 2001. Adaptation of grain legumes (Pulses) to water-limited environments. Adv Agron 71: 193-231.
131. Vaillancourt, R.E. & A.E. Slinkard, 1993. Linkage of morphological and isozyme loci in lentil, Lens culinaris L. Can J Plant Sci 73: 917-926.
132. VandenBosch, K.A. & G. Stacey, 2003. Summaries of Legume Genomics Projects from around the Globe. Community Resources for Crops and Models. Plant Physiol 131: 840-865.
133. Vodkin, L.O., A. Khanna, R. Shealy, S.J. Clough, D.O. Gonzalez, G. Zabala, F. Thibaud-Nissen, M. Sidarous, M.V. Srömvik, E. Shoop, C. Schmidt, E. Retzel, J. Erpelding, R. Shoemaker, A.M. Rodriguez-Huete, J.C. Polacco, V. Coryell, P. Keim, G. Gong, L. Liu, J. Pardinas & P. Schweitzer, 2004. Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant. http://www.biomedcentral.com/ 1471-2164/5/73.
134. Wang, Z., T.P. Dooley, E.V. Curto, R.L. Davis & J.L. VandeBerg, 2004. Cross-species application of cDNA microarrays to profile gene expression using UV-induced melanoma in Monodelphis domestica as the model system. Genomics 83: 588-599.
135. Warkentin, T. & A. McHughen, 1991. Crown gall transformation of lentil (Lens culinaris Medik.) with virulent strains of Agrobacterium tumefaciens. Plant Cell Rep 10: 489-493.
136. Warkentin, T. & A. McHughen, 1992. Agrobacterium tumafaciens-mediated beta-glucuronidase (GUS) gene expression in lentil (Lens culinaris Medik.) tissues. Plant Cell Rep 11: 274-278.
137. Weeden, N.F., F.J. Muehlbauer & G. Ladizinsky, 1992. Extensive conservation of linkage relationships between pea and lentil genetic maps. J Hered 83: 123-129.
138. Winter, P., A.M. Benko-Iseppon, B. Hüttel, M. Ratnaparkhe, A. Tullu, G. Sonnante, T. Pfaff, M. Tekeoglu, D. Santra, V.J. Sant, P.N. Rajesh, G. Kahl & F.J. Muehlbauer, 2000. A linkage map of the chickpea (Cicer arietinum L.) genome based on recombinant inbred lines from a C. arietinum x C. reticulatum cross: Localization of resistance genes for fusarium wilt races 4 and 5. Theor Appl Genet 101: 1155-1163.
139. 2, backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.). Mol Gen Genet 253: 535-545.
140. Yaish, M.W.F., L.E. Sáenz de Miera & M. Pérez de la Vega, 2004. Isolation of a family of resistance gene analogue sequences of the nucleotide binding site (NBS) type from Lens species. Genome 47: 650-659.
141. Yau, S.K. & W. Erskine, 2000. Diversity of boron-toxicity tolerance in lentil growth and yield. Genet Res Crop Evol 47: 55-61.
142. Young, N.D., 1994. Constructing a plant genetic linkage map with DNA markers. In: R.L. Phillips & I.K. Vasil (Eds.), DNA-Based Markers in Plants, pp. 39-57. Kluwer Academic, Dordrecht, Boston.
143. Yu, J., S. Hu, J. Wang, G.K.-S. Wong, S. Li, B. Liu, Y. Deng, L. Dai, Y. Zhou & X. Zhang, 2002. A draft sequence of the rice genome (Oryza sativa L. ssp. Indica). Science 296: 79-92.
144. Zamir, D. & G. Ladizinsky, 1984. Genetics of allozyme variants and linkage groups in lentil. Euphytica 33: 329-336.
145. Závodná, M., J. Kraic, G. Paglia, E. Gregova & M. Morgante, 2000. Differentiation between closely related lentil (Lens culinaris Medik.) cultivars using DNA markers. Seed Sci Tech 28: 217-219.
146. Zhu, Y.L., Q.J. Song, D.L. Hyten, C.P. Van Tassell, L.K. Matukumalli, D.R. Grimm, S.M. Hyatt, E.W. Fickus, N.D. Young & P.B. Cregan, 2003. Single-nucleotide polymorphisms in soybeam. Genetics 163: 1123-1134.