Synthesis, characterization, structures and DNA-binding properties of complexes [Ru(bpy)2(L)]2+ (L = ptdb, ptda and ptdp) with asymmetric intercalative ligands

Inorganica Chimica Acta

Volumn 358, Issue 12, 2005, Pages 3430-3440

  Deng, Hong ^a   Li, Jun ^a   Zheng, Kang C ^a   Yang, Yi ^a   Chao, Hui ^a   Ji, Liang N ^a,b  

^a SUN YAT SEN UNIVERSITY   (China)

^b TONGJI UNIVERSITY   (China)

Author keywords

DFT method; DNA binding; Intercalative ligand; Polypyridyl; Ru(II) complex

Indexed keywords

BINDING ENERGY; CHELATION; CHLORINE COMPOUNDS; COMPLEXATION; CRYSTAL STRUCTURE; CYCLIC VOLTAMMETRY; DENSITY FUNCTIONAL THEORY; DNA; LIGANDS; MASS SPECTROMETRY; MOLECULAR ORBITALS; SYNTHESIS (CHEMICAL); VISCOSITY MEASUREMENT;

DENSITY FUNCTIONAL THEORY METHODS; DFT METHOD; DNA BINDING; DNA-BINDING PROPERTIES; FRONTIER MOLECULAR ORBITAL ENERGIES; LUMINESCENCE SPECTROSCOPY; POLYPYRIDYL; RU COMPLEXES;

RUTHENIUM COMPOUNDS;

EID: 33645854156     PISSN: 00201693     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ica.2005.05.030     Document Type: Article

References (78)

1. D.S. Sigman, A. Mazumder, D.M. Perrin, Chem. Rev. 93 (1993) 2295.
2. M.J. Clarke, Coord. Chem. Rev. 236 (2003) 209.
3. L.N. Ji, X.H. Zou, J.G. Liu, Coord. Chem. Rev. 216-217 (2001) 513.
4. A. Hergueta-Bravo, M.E. Jimenez-Hernandez, F. Montero, E. Oliveros, G. Orellana, J. Phys. Chem. B 106 (2002) 4010.
5. J.A. Aguilar, E. Garcia-Espana, J. Guerrero, S.V. Luis, J.M. Llinares, J.A. Ramirez, C. Soriano, J. Chem. Soc., Chem. Commun. (1995) 2237.
6. D.Y. Kong, A.E. Martell, R.J. Motekaitis, J. Inorg. Biochem. 86 (2001) 298.
7. R.J. Motekaitis, A.E. Martell, Inorg. Chem. 31 (1992) 5534.
8. C.J. Burrows, J.G. Muller, Chem. Rev. 98 (1998) 1109.
9. C.J. Burrows, S.E. Rokita, Acc. Chem. Res. 27 (1994) 295.
10. J.G. Muller, P. Zheng, S.E. Rokita, C.J. Burrows, J. Am. Chem. Soc. 118 (1996) 2320.
11. K.E. Erkkila, D.T. Odom, J.K. Barton, Chem. Rev. 99 (1999) 2777.
12. R.E. Holmlin, P.J. Dandliker, J.K. Barton, Angew. Chem., Int. Ed. Engl. 36 (1997) 2714.
13. M. Eriksson, M. Leijon, C. Hiort, B. Nordén, A. Graslund, Biochemistry 33 (1994) 5031.
14. B. Nordén, P. Lincoln, B. Akermann, E. Tuite, in: A. Sigel, H. Sigel (Eds.), Metal Ions in Biological Systems, vol. 33, Marcel Decker, New York, 1996, p. 177.
15. K. Naining, M. Takahashi, M. Taniguchi, A. Yamagishi, Inorg. Chem. 34 (1995) 350.
16. P. Lincoln, B. Nordén, J. Phys. Chem. B 102 (1998) 9583.
17. S.D. Choi, M.S. Kim, S.K. Kim, P. Lincoln, E. Tuite, B. Nordén, Biochemistry 36 (1997) 214.
18. Y. Xiong, L.N. Ji, Coord. Chem. Rev. 185 (1999) 711.
19. C. Hiort, P. Lincoln, B. Nordén, J. Am. Chem. Soc. 115 (1993) 3448.
20. C.M. Dupureur, J.K. Barton, Inorg. Chem. 36 (1997) 33.
21. P. Lincoln, A. Broo, B. Nordén, J. Am. Chem. Soc. 118 (1996) 2644.
22. X.H. Zou, B.H. Ye, H. Li, J.G. Liu, Y. Xiong, L.N. Ji, J. Chem. Soc., Dalton Trans. (1999) 1423.
23. H. Deng, J.W. Cai, H. Xu, H. Zhang, L.N. Ji, J. Chem. Soc., Dalton Trans. (2003) 325.
24. C.W. Jiang, J. Inorg. Biochem. 98 (2004) 497.
25. C.W. Jiang, H. Chao, X.L. Lang, H. Li, W.J. Mei, L.N. Ji, Inorg. Chem. Comum. 6 (2003) 773.
26. R.J. Morgan, S. Chatterjee, A.D. Baker, T.C. Strekas, Inorg. Chem. 30 (1991) 2687.
27. P. Hohenberg, W. Kohn, Phys. Rev. B 106 (1964) 864.
28. A.D. Becke, J. Chem. Phys. 98 (1993) 1372.
29. A. Gorling, Phys. Rev. A 54 (1996) 3912.
30. J.B. Foresman, Æ. Frisch, Exploring Chemistry with Electronic Structure Methods, second ed., Gaussian, Inc., Pittsburgh, PA, 1996.
31. M.K. Nazeeruddin, S.M. Zakeeruddin, R. Humphry-Baker, S.I. Gorelsky, A.B.P. Lever, M. Gratzel, Coord. Chem. Rev. 208 (2000) 213.
32. G. Pourtois, D. Beljonne, C. Moucheron, S. Schumm, A.K.D. Mesmaeker, R. Lazzaroni, J.L. Bredas, J. Am. Chem. Soc. 126 (2004) 683.
33. A. Pfletschinger, W. Koch, H.G. Schmalz, Chem. Eur. J. 7 (2001) 5325.
34. S.R. Stoyanov, J.M. Villegas, D.P. Rillema, Inorg. Chem. 41 (2002) 2941.
35. D. Reha, M. Kabelac, F. Ryjacek, J. Sponer, J.E. Sponer, M. Eistner, S. Suhai, P. Hobza, J. Am. Chem. Soc. 124 (2002) 3366.
36. N. Kurita, K. Kobayashi, Comput. Chem. 24 (2000) 351.
37. K.C. Zheng, J.P. Wang, W.L. Peng, X.W. Liu, F.C. Yun, J. Phys. Chem. A 105 (2001) 10899.
38. W.J. Mei, J. Liu, K.C. Zheng, L.J. Lin, H. Chao, A.X. Li, F.C. Yun, L.N. Ji, Dalton Trans. (2003) 1352.
39. J. Liu, W.J. Mei, L.J. Lin, K.C. Zheng, H. Chao, F.C. Yun, L.N. Ji, Inorg. Chim. Acta 357 (2004) 285.
40. B.P. Sullivan, D.J. Salmon, T.J. Meyer, Inorg. Chem. 17 (1978) 3334.
41. F.H. Case, J. Heterocycl. Chem. 5 (1968) 223.
42. X.L. Wang, H. Chao, H. Li, X.L. Hong, Y.J. Liu, L.F. Tan, L.N. Ji, J. Inorg. Biochem. 98 (2004) 1143.
43. A. Wolfe, G.H. Shimer, T. Meehan, Biochemistry 26 (1987) 6392.
44. M.E. Reichmann, S.A. Rice, C.A. Thomas, P. Doty, J. Am. Chem. Soc. 76 (1954) 3047.
45. J.B. Chaires, N. Dattagupta, D.M. Crothers, Biochemistry 21 (1982) 3933.
46. G. Cohen, H. Eisenberg, Biopolymers 8 (1969) 45.
47. A.X.S. Bruker, SMART, Version 5.0, Bruker AXS, Madison, WI, USA, 1998.
48. A.X.S. Bruker, SAINT1, Version 6.0, Bruker AXS, Madison, WI, USA, 1999.
49. R. Blessing, Acta Crystallogr., Sect. A 51 (1995) 33238.
50. G.M. Sheldrick, SHELX-97: Program for Crystal Structure Solution and Refinement, University of Göttingen, Göttingen, Germany, 1997.
51. P.J. Hay, W.R. Wadt, J. Chem. Phys. 82 (1985) 270.
52. W.R. Wadt, P.J. Hay, J. Chem. Phys. 82 (1985) 284.
53. A. Juris, V. Balzani, F. Barigelletti, S. Campagna, P. Belser, A.V. Zelewsky, Coord. Chem. Rev. 84 (1988) 85.
54. M.J. Frisch, G.W. Trucks, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman, V.G. Zakrzewski, J.A. Montgomery Jr., R.E. Stratmann, J.C. Burant, S. Dapprich, J.M. Millam, A.D. Daniels, K.N. Kudin, M.C. Strain, O. Farkas, J. Tomasi, V. Barone, M. Cossi, R. Cammi, B. Mennucci, C. Pomelli, C. Adamo, S. Clifford, J. Ochterski, G.A. Petersson, P.Y. Ayala, Q. Cui, K. Morokuma, N. Rega, P. Salvador, J.J. Dannenberg, D.K. Malick, A.D. Rabuck, K. Raghavachari, J.B. Foresman, J. Cioslowski, J.V. Ortiz, A.G. Baboul, B.B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R. Gomperts, R.L. Martin, D.J. Fox, T. Keith, M.A. Al-Laham, C.Y. Peng, A. Nanayakkara, M. Challacombe, P.M.W. Gill, B. Johnson, W. Chen, M.W. Wong, J.L. Andres, C. Gonzalez, M. Head-Gordon, E.S. Replogle, J.A. Pople, GAUSSIAN-98, Revision A.11.4, Gaussian, Inc., Pittsburgh, PA, 2002.
55. G. Schaftenaar, J.H. Noordik, J. Comput. Aided Mol. Design 14 (2000) 123.
56. D.P. Rillema, D.S. Jones, H.A. Levy, J. Chem. Soc., Chem. Commun. (1979) 849.
57. D.P. Rillema, D.S. Jones, C. Woods, H.A. Levy, Inorg. Chem. 31 (1992) 2935.
58. B.K. Ghosh, A. Chakra-Vorty, Coord. Chem. Rev. 95 (1989) 239.
59. K. Kalyanasundaram, Coord. Chem. Rev. 46 (1982) 159.
60. G. Yang, J.Z. Wu, L. Wang, L.N. Ji, X. Tian, J. Inorg. Biochem. 66 (1997) 141.
61. J.K. Barton, A.L. Raphael, J. Am. Chem. Soc. 106 (1984) 2466.
62. J.K. Barton, A.T. Danishefsky, J.M. Goldberg, J. Am. Chem. Soc. 106 (1984) 2172.
63. A.M. Pyle, J.P. Rehmann, R. Meshoyrer, C.V. Kumar, N.J. Turro, J.K. Barton, J. Am. Chem. Soc. 111 (1989) 3051.
64. E.C. Long, J.K. Barton, Acc. Chem. Res. 23 (1990) 271.
65. H. Deng, H. Xu, Y. Yang, H. Li, H. Zou, L.H. Qu, L.N. Ji, J. Inorg. Biochem. 97 (2003) 207.
66. P. Lincoln, E. Tuite, B. Nordén, J. Am. Chem. Soc. 119 (1997) 1454.
67. X. Qu, J.B. Chaires, Methods Enzymol. 321 (2000) 353.
68. J.B. Chaires, Methods Enzymol. 340 (2001) 3.
69. J.J. Correia, J.B. Chaires, Methods Enzymol. 240 (1994) 593.
70. J.Z.Wu B.H.Ye, L. Wang, L.N. Ji, J.Y. Zhou, R.H. Li, Z.Y. Zhou, J. Chem. Soc., Dalton Trans. (1997) 1395.
71. J.G. Liu, B.H. Ye, H. Li, L.N. Ji, R.H. Li, J.Y. Zhou, J. Inorg. Biochem. 73 (1999) 117.
72. R.H. Hartshorn, J.K. Barton, J. Am. Chem. Soc. 114 (1992) 5919.
73. R.B. Nair, E.S. Teng, S.L. Kirkland, C.J. Murphy, Inorg. Chem. 37 (1998) 139.
74. J.G. Liu, Q.L. Zhang, X.F. Shi, L.N. Ji, Inrog. Chem. 40 (2001) 5045.
75. B.C. Baguley, M. LeBret, Biochemistry 23 (1984) 937.
76. J.R. Lakowicz, G. Webber, Biochemistry 12 (1973) 4161.
77. S. Satyanarayana, J.C. Dabrowiak, J.B. Chaires, Biochemistry 31 (1992) 9319.
78. S. Satyanarayana, J.C. Dabrowiak, J.B. Chaires, Biochemistry 32 (1993) 2573.