-
2
-
-
0037251969
-
The Ribosomal database project (RDP-II) previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
Cole JR Chai B Marsh TL et al 2003 The Ribosomal database project (RDP-II) previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31 442 443.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 442-443
-
-
Cole J, R.1
Chai, B.2
Marsh, T.L.3
Al, E.4
-
3
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
Eckburg PB Bik EM Bernstein CN Purdom E Dethlefsen L Sargent M Gill SR Nelson KE Relman DA 2005 Diversity of the human intestinal microbial flora. Science 308 1635 1638.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg P, B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
Sargent, M.6
Gill, S.R.7
Nelson, K.E.8
Relman, D.A.9
-
4
-
-
0031692488
-
Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes
-
Franks AH Harmsen HJM Raangs GC Jansen GJ Schut F Welling GW 1998 Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes. Appl Environ Microbiol 64 3336 3345.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3336-3345
-
-
Franks A, H.1
Harmsen, H.J.M.2
Raangs, G.C.3
Jansen, G.J.4
Schut, F.5
Welling, G.W.6
-
5
-
-
0036024611
-
Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods
-
Hayashi H Sakamoto M Benno Y 2002a Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods. Microbiol Immunol 46 535 548.
-
(2002)
Microbiol Immunol
, vol.46
, pp. 535-548
-
-
Hayashi H1
Sakamoto, M.2
Benno, Y.3
-
6
-
-
0036917143
-
Fecal microbial diversity in a strict vegetarian as determined by molecular analysis and cultivation
-
Hayashi H Sakamoto M Benno Y 2002b Fecal microbial diversity in a strict vegetarian as determined by molecular analysis and cultivation. Microbiol Immunol 46 819 831.
-
(2002)
Microbiol Immunol
, vol.46
, pp. 819-831
-
-
Hayashi H1
Sakamoto, M.2
Benno, Y.3
-
7
-
-
0042471955
-
Molecular analysis of fecal microbiota in elderly individuals using 16S rDNA library and T-RFLP
-
Hayashi H Sakamoto M Kitahara M Benno Y 2003 Molecular analysis of fecal microbiota in elderly individuals using 16S rDNA library and T-RFLP. Microbiol Immunol 47 557 570.
-
(2003)
Microbiol Immunol
, vol.47
, pp. 557-570
-
-
Hayashi H1
Sakamoto, M.2
Kitahara, M.3
Benno, Y.4
-
8
-
-
27644574002
-
Molecular analysis of jejunal, ileal, cecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism
-
Hayashi H Takahashi R Nishi T Sakamoto M Benno Y 2005 Molecular analysis of jejunal, ileal, cecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism. J Med Microbiol 54 1093 1101.
-
(2005)
J Med Microbiol
, vol.54
, pp. 1093-1101
-
-
Hayashi H1
Takahashi, R.2
Nishi, T.3
Sakamoto, M.4
Benno, Y.5
-
10
-
-
0019296687
-
A simple method for estimating the evolutionary rate of base substitutions through comparative studies of nucleotide sequences
-
Kimura M 1980 A simple method for estimating the evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16 111 120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura M1
-
13
-
-
1642277665
-
Restricted distribution of the butyrate kinase pathway among butyrate-producing bacteria from the human colon
-
Louis P Duncan SH McCrae SI Millar J Jackson MS Flint HJ 2004 Restricted distribution of the butyrate kinase pathway among butyrate-producing bacteria from the human colon. J Bacteriol 186 2099 2106.
-
(2004)
J Bacteriol
, vol.186
, pp. 2099-2106
-
-
Louis P1
Duncan, S.H.2
McCrae, S.I.3
Millar, J.4
Jackson, M.S.5
Flint, H.J.6
-
14
-
-
10444226583
-
Use of 16S rRNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces
-
Matsuki T Watanabe K Fujimoto J Takada T Tanaka R 2004 Use of 16S rRNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces. Appl Environ Microbiol 70 7220 7228.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 7220-7228
-
-
Matsuki T1
Watanabe, K.2
Fujimoto, J.3
Takada, T.4
Tanaka, R.5
-
16
-
-
0037445321
-
Fluorescent hybridization combined with flow cytometry and hybridization of total RNA to analyze the composition of microbial communities in human faeces using 16S rRNA probes
-
Rigottier-Gois L Le Bourhis AG Gramet G Rochet V Dore J 2002 Fluorescent hybridization combined with flow cytometry and hybridization of total RNA to analyze the composition of microbial communities in human faeces using 16S rRNA probes. FEMS Microbiol Ecol 43 237 245.
-
(2002)
FEMS Microbiol Ecol
, vol.43
, pp. 237-245
-
-
Rigottier-Gois Le, L.1
Bourhis, A.G.2
Gramet, G.3
Rochet, V.4
Dore, J.5
-
17
-
-
0023375195
-
The neighbor-joining method a new method for reconstructing phylogenetic trees
-
Saitou N Nei M 1987 The neighbor-joining method a new method for reconstructing phylogenetic trees. Mol Biol Evol 4 406 425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou N1
Nei, M.2
-
18
-
-
2942691956
-
Getting a grip on things how do communities of bacterial symbionts become established in our intestine?
-
Sonnenburg JL Angenent LT Gordon JI 2004 Getting a grip on things how do communities of bacterial symbionts become established in our intestine? Nat Immunol 5 569 573.
-
(2004)
Nat Immunol
, vol.5
, pp. 569-573
-
-
Sonnenburg J, L.1
Angenent, L.T.2
Gordon, J.I.3
-
19
-
-
0032755259
-
Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut
-
Suau A Bonnet R Sutren M Godon J-J Gibson GR Collins MD Dore J 1999 Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Appl Environ Microbiol 65 4799 4807.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 4799-4807
-
-
Suau A1
Bonnet, R.2
Sutren, M.3
Godon, J.-J.4
Gibson, G.R.5
Collins, M.D.6
Dore, J.7
-
20
-
-
0027351037
-
Physiological and pathophysiological effects of carbohydrate fermentation
-
Szylit O Andrieux C 1993 Physiological and pathophysiological effects of carbohydrate fermentation. World Rev Nutr Diet 74 88 122.
-
(1993)
World Rev Nutr Diet
, vol.74
, pp. 88-122
-
-
Szylit O1
Andrieux, C.2
-
21
-
-
0027968068
-
CLUSTAL W improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD Higgins DG Gibson TJ 1994 CLUSTAL W improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22 4673 4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson J, D.1
Higgins, D.G.2
Gibson, T.J.3
-
23
-
-
0029900986
-
Human colonic biota studied by ribosomal DNA sequence analysis
-
Wilson KH Blitchington RB 1996 Human colonic biota studied by ribosomal DNA sequence analysis. Appl Environ Microbiol 62 2273 2278.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 2273-2278
-
-
Wilson K, H.1
Blitchington, R.B.2
-
25
-
-
0031684010
-
Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria
-
Zoetendal EG Akkermans AD de Vos WM 1998 Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria. Appl Environ Microbiol 64 3854 3859.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3854-3859
-
-
Zoetendal E, G.1
De, A.A.D.2
Vos, W.M.3
-
26
-
-
0036729237
-
Quantification of uncultured Ruminococcus obeum-like bacteria in human fecal samples by fluorescent in situ hybridization and flow cytometry using 16S rRNA-targeted probes
-
Zoetendal EG Ben-Amor K Harmsen HJM Schut F Akkermans ADL de Vos WM 2002 Quantification of uncultured Ruminococcus obeum-like bacteria in human fecal samples by fluorescent in situ hybridization and flow cytometry using 16S rRNA-targeted probes. Appl Environ Microbiol 68 4225 4232.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 4225-4232
-
-
Zoetendal E, G.1
Ben-Amor, K.2
Harmsen, H.J.M.3
Schut, F.4
De, A.A.D.L.5
Vos, W.M.6
|