An efficient gene transfer system for the pimaricin producer Streptomyces natalensis

FEMS Microbiology Letters

Volumn 257, Issue 2, 2006, Pages 312-318

  Enríquez, Lorena L ^a   Mendes, Marta V ^a,c   Antón, Nuria ^b   Tunca, Sedef ^a   Guerra, Susana M ^b   Martín, Juan F ^a,b   Aparicio, Jesús F ^a,b  

^a Institute of Biotechnology INBIOTEC Parque Científico de León   (Spain)

^b UNIVERSITY OF LEÓN   (Spain)

^c UNIVERSITY OF PORTO   (Portugal)

Author keywords

Conjugation; Pimaricin; Polyene; Streptomyces natalensis

Indexed keywords

AMPICILLIN; ANTIFUNGAL AGENT; APRAMYCIN; CHLORAMPHENICOL; KANAMYCIN; MACROLIDE; NATAMYCIN;

ARTICLE; CONJUGATION; COSMID VECTOR; CROSSING OVER; DNA METHYLATION; ESCHERICHIA COLI; GENE REPLACEMENT THERAPY; GENE TRANSFER; GENETIC MANIPULATION; GENETIC RECOMBINATION; NONHUMAN; PLASMID; PRIORITY JOURNAL; STREPTOMYCES; STREPTOMYCES NATALENSIS;

CONJUGATION, GENETIC; COSMIDS; ESCHERICHIA COLI; GENE TRANSFER TECHNIQUES; NATAMYCIN; STREPTOMYCES; TRANSFORMATION, BACTERIAL;

ESCHERICHIA COLI; STREPTOMYCES; STREPTOMYCES NATALENSIS;

EID: 33645231502     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2006.00189.x     Document Type: Article

References (39)

1. Aparicio JF Colina AJ Ceballos E Martín JF 1999 The biosynthetic gene cluster for the 26-membered ring polyene macrolide pimaricin a new polyketide synthase organization encoded by two subclusters separated by functionalization genes. J Biol Chem 274 10133 10139.
2. Aparicio JF Fouces R Mendes MV Olivera N Martín JF 2000 A complex multienzyme system encoded by five polyketide synthase genes is involved in the biosynthesis of the 26-membered polyene macrolide pimaricin in Streptomyces natalensis. Chem Biol 7 895 905.
3. Aparicio JF Caffrey P Gil JA Zotchev SB 2003 Polyene antibiotic biosynthesis gene clusters. Appl Microbiol Biotechnol 61 179 188.
4. Aparicio JF Mendes MV Antón N Recio E Martín JF 2004 Polyene macrolide antibiotic biosynthesis. Curr Med Chem 11 1645 1656.
5. Antón N Mendes MV Martín JF Aparicio JF 2004 Identification of PimR as a positive regulator of pimaricin biosynthesis in Streptomyces natalensis. J Bacteriol 186 2567 2575.
6. Bailey CR Winstanley DJ 1986 Inhibition of restriction in Streptomyces clavuligerus by heat treatment. J Gen Microbiol 132 2945 2947.
7. Bierman M Logan R O'Brien K Seno ET Rao RN Schoner BE 1992 Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp. Gene 116 43 49.
8. Choi S Lee C Hwang Y Kinoshita H Nihira T 2004 Intergeneric conjugal transfer of plasmid DNA from Escherichia coli to Kitasatospora setae, a bafilomycin B1 producer. Arch Microbiol 181 294 298.
9. Datsenko KA Wanner BL 2000 One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97 6640 6645.
10. Engel P 1987 Plasmid transformation of Streptomyces tendae after heat attenuation of restriction. Appl Environ Microbiol 53 1 3.
11. Flett F Mersinias V Smith CP 1997 High efficiency intergeneric conjugal transfer of plasmid DNA from Escherichia coli to methyl DNA-restricting streptomycetes. FEMS Microbiol Lett 155 223 229.
12. Gust B Challis GL Fowler K Kieser T Chater KF 2003 PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin. Proc Natl Acad Sci USA 100 1541 1546.
13. Hobbs G Frazer CM Gardner DCJ Cullum JA Oliver SG 1989 Dispersed growth of Streptomyces in liquid culture. Appl Microbiol Biotechnol 31 272 277.
14. Kendall KJ Cohen SN 1988 Complete nucleotide sequence of the Streptomyces lividans plasmid pIJ101 and correlation of the sequence with genetic properties. J Bacteriol 170 4634 4651.
15. Kieser T Hopwood DA 1991 Genetic manipulation of Streptomyces integrating vectors and gene replacement. Methods Enzymol 204 430 458.
16. Kieser T Bibb MJ Buttner MJ Chater KF Hopwood DA 2000 Practical Streptomyces Genetics. John Innes Foundation Norwich.
17. MacNeil DJ 1988 Characterization of a unique methyl-specific restriction system in Streptomyces avermitilis. J Bacteriol 170 5607 5612.
18. MacNeil DJ Gewain KM Ruby CL Dezeny G Gibbons PH MacNeil T 1992 Analysis of Streptomyces avermitilis genes required for avermectin biosynthesis utilizing a novel integration vector. Gene 111 61 68.
19. Matsushima P Broughton MC Turner JR Baltz RH 1994 Conjugal transfer of cosmid DNA from Escherichia coli to Saccharopolyspora spinosa effects of chromosomal insertions on macrolide A83543 production. Gene 146 39 45.
20. Mazodier P Petter R Thompson CJ 1989 Intergeneric conjugation between Escherichia coli and Streptomyces species. J Bacteriol 171 3583 3585.
21. Van Mellaert L Mei L Lammertyn E Schacht S Anne J 1998 Site-specific integration of bacteriophage VWB genome into Streptomyces venezuelae and construction of a VWB-based integrative vector. Microbiology 144 3351 3358.
22. Mendes MV Aparicio JF Martín JF 2000 Complete nucleotide sequence and characterization of pSNA1 from the pimaricin-producing Streptomyces natalensis that replicates by a rolling circle mechanism. Plasmid 43 159 165.
23. Mendes MV Recio E Fouces R Luiten R Martín JF Aparicio JF 2001 Engineered biosynthesis of novel polyenes a pimaricin derivative produced by targeted gene disruption in Streptomyces natalensis. Chem Biol 8 635 644.
24. Mendes MV Antón N Martín JF Aparicio JF 2005 Characterization of the polyene macrolide P450 epoxidase from Streptomyces natalensis that converts deepoxypimaricin into pimaricin. Biochem J 386 57 62.
25. Muth G Farr M Hartman V Wohlleben W 1995 Streptomyces ghanaensis plasmid pSG5 nucleotide sequence analysis of the self-transmissible minimal replicon and characterization of the replication mode. Plasmid 33 113 126.
26. Muyrers JP Zhang Y Testa G Stewart AF 1999 Rapid modification of bacterial artificial chromosomes by ET-recombination. Nucleic Acids Res 27 1555 1557.
27. Nikodinovic J Barrow KD Chuck JA 2003 High frequency transformation of the amphotericin-producing bacterium Streptomyces nodosus. J Microbiol Methods 55 273 277.
28. Oh SH Chater KF 1997 Denaturation of circular or linear DNA facilitates targeted integrative transformation of Streptomyces coelicolor A3(2) possible relevance to other organisms. J Bacteriol 179 122 127.
29. Paget MS Chamberlin L Atrih A Foster SJ Buttner MJ 1999 Evidence that the extracytoplasmic function sigma factor sigmaE is required for normal cell wall structure in Streptomyces coelicolor A3(2). J Bacteriol 181 204 211.
30. Paranthaman S Dharmalingam K 2003 Intergeneric conjugation in Streptomyces peucetius and Streptomyces sp. strain C5: chromosomal integration and expression of recombinant plasmids carrying the chiC gene. Appl Environ Microbiol 69 84 91.
31. Sambrook J Russell DW 2001 Molecular Cloning: A Laboratory Manual 3rd edn. Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY.
32. Sekurova ON Brautaset T Sletta H Borgos SEF Jakobsen OM Ellingsen TE Strom AR Valla S Zotchev SB 2004 In vivo analysis of the regulatory genes in the nystatin biosynthetic gene cluster of Streptomyces noursei ATCC 11455 reveals their differential control over antibiotic biosynthesis. J Bacteriol 186 1345 1354.
33. Smokvina T Mazodier P Boccard F Thompson CJ Guerineau M 1990 Construction of a series of pSAM2-based integrative vectors for use in actinomycetes. Gene 94 53 49.
34. Sun Y Zhou X Liu J Bao K Zhang G Tu G Kieser T Deng Z 2002 Streptomyces nanchangensis, a producer of the insecticidal polyether antibiotic nanchangmycin and the antiparasitic macrolide meilingmycin, contains multiple polyketide gene clusters. Microbiology 148 361 371.
35. Voeykova T Emelyanova L Tabakov V Mkrtumyam N 1998 Transfer of plasmid pTO1 from Escherichia coli to various representatives of the order Actinomycetales by intergeneric conjugation. FEMS Microbiol Lett 162 47 52.
36. Zhang Y Buchholz F Muyrers JP Stewart AF 1998 A new logic for DNA engineering using recombination in Escherichia coli. Nat Genet 20 123 128.
37. Zhang Y Muyrers JP Testa G Stewart AF 2000 DNA cloning by homologous recombination in Escherichia coli. Nat Biotechnol 18 1314 1317.
38. Zotchev SB Schrempf H Hutchinson CR 1995 Identification of a methyl-specific restriction system mediated by a conjugative element from Streptomyces bambergiensis. J Bacteriol 177 4809 4812.
39. Zotchev S Haugan K Sekurova O Sletta H Ellingsen TE Valla S 2000 Identification of a gene cluster for antibacterial polyketide-derived antibiotic biosynthesis in the nystatin producer Streptomyces noursei ATCC 11455. Microbiology 146 611 619.