-
1
-
-
10744226029
-
The calcium sensor CBLl integrates plant responses to abiotic stresses
-
Albrecht V, Weinl S, Blazevic D, D'Angelo C, Batistic O, Kolukisaoglu U, Bock R, Schulz B, Harter K, Kudla J. 2003. The calcium sensor CBLl integrates plant responses to abiotic stresses. The Plant Journal 36, 457-470.
-
(2003)
The Plant Journal
, vol.36
, pp. 457-470
-
-
Albrecht, V.1
Weinl, S.2
Blazevic, D.3
D'Angelo, C.4
Batistic, O.5
Kolukisaoglu, U.6
Bock, R.7
Schulz, B.8
Harter, K.9
Kudla, J.10
-
3
-
-
12444289103
-
The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling
-
Armengaud P, Breitling R, Amtmann A. 2004. The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling. Plant Physiology 136, 2556-2576.
-
(2004)
Plant Physiology
, vol.136
, pp. 2556-2576
-
-
Armengaud, P.1
Breitling, R.2
Amtmann, A.3
-
5
-
-
0036598460
-
Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis
-
Cheong YH, Chang HS, Gupta R, Wang X, Zhu T, Luan S. 2002. Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. Plant Physiology 129, 661-677.
-
(2002)
Plant Physiology
, vol.129
, pp. 661-677
-
-
Cheong, Y.H.1
Chang, H.S.2
Gupta, R.3
Wang, X.4
Zhu, T.5
Luan, S.6
-
6
-
-
0041920602
-
CBL1, a calcium sensor that differentially regulates salt, drought, and cold responses in Arabidopsis
-
Cheong YH, Kim KN, Pandey GK, Gupta R, Grant JJ, Luan S. 2003. CBL1, a calcium sensor that differentially regulates salt, drought, and cold responses in Arabidopsis. The Plant Cell 15, 1833-1845.
-
(2003)
The Plant Cell
, vol.15
, pp. 1833-1845
-
-
Cheong, Y.H.1
Kim, K.N.2
Pandey, G.K.3
Gupta, R.4
Grant, J.J.5
Luan, S.6
-
7
-
-
1642441342
-
Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants
-
Chinnusamy V, Schumaker K, Zhu JK. 2004. Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants. Journal of Experimental Botany 55, 225-236.
-
(2004)
Journal of Experimental Botany
, vol.55
, pp. 225-236
-
-
Chinnusamy, V.1
Schumaker, K.2
Zhu, J.K.3
-
8
-
-
0347968038
-
NASCArrays: A repository for microarray data generated by NASC's transcriptomics service
-
Craigon DJ, James N, Okyere J, Higgins J, Jotham J, May S. 2004. NASCArrays: a repository for microarray data generated by NASC's transcriptomics service. Nucleic Acids Research 32, D575-D577.
-
(2004)
Nucleic Acids Research
, vol.32
-
-
Craigon, D.J.1
James, N.2
Okyere, J.3
Higgins, J.4
Jotham, J.5
May, S.6
-
9
-
-
0032129686
-
SA, JA, ethylene, and disease resistance in plants
-
Dong X. 1998. SA, JA, ethylene, and disease resistance in plants. Current Opinion in Plant Biology 1, 316-323.
-
(1998)
Current Opinion in Plant Biology
, vol.1
, pp. 316-323
-
-
Dong, X.1
-
10
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen MB, Spellman PT, Brown PO, Botstein D. 1998. Cluster analysis and display of genome-wide expression patterns. Proceedings of the National Academy of Sciences, USA 95, 14863-14868.
-
(1998)
Proceedings of the National Academy of Sciences, USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
11
-
-
0034031131
-
Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression
-
Fujimoto SY, Ohta M, Usui A, Shinshi H, Ohme-Takagi M. 2000. Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. The Plant Cell 12, 393-404.
-
(2000)
The Plant Cell
, vol.12
, pp. 393-404
-
-
Fujimoto, S.Y.1
Ohta, M.2
Usui, A.3
Shinshi, H.4
Ohme-Takagi, M.5
-
13
-
-
0037057374
-
Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering
-
RESEARCH0059
-
Gasch AP, Eisen MB. 2002. Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering. Genome Biology 3, RESEARCH0059.
-
(2002)
Genome Biology
, vol.3
-
-
Gasch, A.P.1
Eisen, M.B.2
-
14
-
-
0034870221
-
Genetic interactions between ABA, ethylene and sugar signaling pathways
-
Gazzarrini S, McCourt P. 2001. Genetic interactions between ABA, ethylene and sugar signaling pathways. Current Opinion in Plant Biology 4, 387-391.
-
(2001)
Current Opinion in Plant Biology
, vol.4
, pp. 387-391
-
-
Gazzarrini, S.1
McCourt, P.2
-
15
-
-
0345504891
-
Crosstalk in plant cell signaling: Structure and function of the genetic network
-
Genoud T, Metraux JP. 1999. Crosstalk in plant cell signaling: structure and function of the genetic network. Trends in Plant Science 4, 503-507.
-
(1999)
Trends in Plant Science
, vol.4
, pp. 503-507
-
-
Genoud, T.1
Metraux, J.P.2
-
16
-
-
0034489614
-
Plant cellular and molecular responses to high salinity
-
Hasegawa PM, Bressan RA, Zhu JK, Bohnert HJ. 2000. Plant cellular and molecular responses to high salinity. Annual Review of Plant Physiology and Plant Molecular Biology 51, 463-499.
-
(2000)
Annual Review of Plant Physiology and Plant Molecular Biology
, vol.51
, pp. 463-499
-
-
Hasegawa, P.M.1
Bressan, R.A.2
Zhu, J.K.3
Bohnert, H.J.4
-
17
-
-
12244268610
-
Genome-wide gene expression profiling in Arabidopsis thaliana reveals new targets of abscisic acid and largely impaired gene regulation in the abi1-1 mutant
-
Hoth S, Morgante M, Sanchez JP, Hanafey MK, Tingey SV, Chua NH. 2002. Genome-wide gene expression profiling in Arabidopsis thaliana reveals new targets of abscisic acid and largely impaired gene regulation in the abi1-1 mutant. Journal of Cell Science 115, 4891-4900.
-
(2002)
Journal of Cell Science
, vol.115
, pp. 4891-4900
-
-
Hoth, S.1
Morgante, M.2
Sanchez, J.P.3
Hanafey, M.K.4
Tingey, S.V.5
Chua, N.H.6
-
18
-
-
5144219900
-
ABF2, an ABRE-binding bZIP factor, is an essential component of glucose signaling and its overexpression affects multiple stress tolerance
-
Kim S, Kang JY, Cho DI, Park JH, Kim SY. 2004. ABF2, an ABRE-binding bZIP factor, is an essential component of glucose signaling and its overexpression affects multiple stress tolerance. The Plant Journal 40, 75-87.
-
(2004)
The Plant Journal
, vol.40
, pp. 75-87
-
-
Kim, S.1
Kang, J.Y.2
Cho, D.I.3
Park, J.H.4
Kim, S.Y.5
-
19
-
-
0036909761
-
Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress
-
Kreps JA, Wu Y, Chang HS, Zhu T, Wang X, Harper JF. 2002. Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. Plant Physiology 130, 2129-2141.
-
(2002)
Plant Physiology
, vol.130
, pp. 2129-2141
-
-
Kreps, J.A.1
Wu, Y.2
Chang, H.S.3
Zhu, T.4
Wang, X.5
Harper, J.F.6
-
20
-
-
0036017859
-
Cross talk between signaling pathways in pathogen defence
-
Kunkel BN, Brooks DM. 2002. Cross talk between signaling pathways in pathogen defence. Current Opinion in Plant Biology 5, 325-331.
-
(2002)
Current Opinion in Plant Biology
, vol.5
, pp. 325-331
-
-
Kunkel, B.N.1
Brooks, D.M.2
-
21
-
-
0032144961
-
Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought-and low-temperature-responsive gene expression, respectively, in Arabidopsis
-
Liu Q, Kasuga M, Sakuma Y, Abe H, Miura S, Yamaguchi-Shinozaki K, Shinozaki K. 1998. Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought-and low-temperature-responsive gene expression, respectively, in Arabidopsis. The Plant Cell 10, 1391-1406.
-
(1998)
The Plant Cell
, vol.10
, pp. 1391-1406
-
-
Liu, Q.1
Kasuga, M.2
Sakuma, Y.3
Abe, H.4
Miura, S.5
Yamaguchi-Shinozaki, K.6
Shinozaki, K.7
-
22
-
-
20844445318
-
Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets
-
Persson S, Wei H, Milne J, Page GP, Somerville CR. 2005. Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. Proceedings of the National Academy of Sciences, USA 102, 8633-8638.
-
(2005)
Proceedings of the National Academy of Sciences, USA
, vol.102
, pp. 8633-8638
-
-
Persson, S.1
Wei, H.2
Milne, J.3
Page, G.P.4
Somerville, C.R.5
-
23
-
-
0037311919
-
TM4: A free, open-source system for microarray data management and analysis
-
Saeed AI, Sharov V, White J, et al. 2003. TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34, 374-378.
-
(2003)
Biotechniques
, vol.34
, pp. 374-378
-
-
Saeed, A.I.1
Sharov, V.2
White, J.3
-
24
-
-
0036679053
-
Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray
-
Seki M, Narusaka M, Ishida J, et al. 2002. Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray. The Plant Journal 31, 279-292.
-
(2002)
The Plant Journal
, vol.31
, pp. 279-292
-
-
Seki, M.1
Narusaka, M.2
Ishida, J.3
-
25
-
-
8444249369
-
Root growth maintenance during water deficits: Physiology to functional genomics
-
Sharp RE, Poroyko V, Hejlek LG, Spollen WG, Springer GK, Bohnert HJ, Nguyen HT. 2004. Root growth maintenance during water deficits: physiology to functional genomics. Journal of Experimental Botany 55, 2343-2351.
-
(2004)
Journal of Experimental Botany
, vol.55
, pp. 2343-2351
-
-
Sharp, R.E.1
Poroyko, V.2
Hejlek, L.G.3
Spollen, W.G.4
Springer, G.K.5
Bohnert, H.J.6
Nguyen, H.T.7
-
26
-
-
0034062083
-
Analysis of large-scale gene expression data
-
Sherlock G. 2000. Analysis of large-scale gene expression data. Current Opinion in Immunology 12, 201-205.
-
(2000)
Current Opinion in Immunology
, vol.12
, pp. 201-205
-
-
Sherlock, G.1
-
27
-
-
0036009776
-
The putative plasma membrane Na(+)/H(+) antiporter SOS1 controls long-distance Na(+) transport in plants
-
Shi H, Quintero FJ, Pardo JM, Zhu JK. 2002. The putative plasma membrane Na(+)/H(+) antiporter SOS1 controls long-distance Na(+) transport in plants. The Plant Cell 14, 465-477.
-
(2002)
The Plant Cell
, vol.14
, pp. 465-477
-
-
Shi, H.1
Quintero, F.J.2
Pardo, J.M.3
Zhu, J.K.4
-
28
-
-
0034028259
-
Molecular responses to dehydration and low temperature: Differences and cross-talk between two stress signaling pathways
-
Shinozaki K, Yamaguchi-Shinozaki K. 2000. Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Current Opinion in Plant Biology 3, 217-223.
-
(2000)
Current Opinion in Plant Biology
, vol.3
, pp. 217-223
-
-
Shinozaki, K.1
Yamaguchi-Shinozaki, K.2
-
30
-
-
12344328434
-
CSB.DB: A comprehensive systems-biology database
-
Steinhauser D, Usadel B, Luedemann A, Thimm O, Kopka J. 2004. CSB.DB: a comprehensive systems-biology database. Bioinformatics 20, 3647-3651.
-
(2004)
Bioinformatics
, vol.20
, pp. 3647-3651
-
-
Steinhauser, D.1
Usadel, B.2
Luedemann, A.3
Thimm, O.4
Kopka, J.5
-
31
-
-
3543005992
-
Comparative genomics in salt tolerance between Arabidopsis and Arabidopsis-relaled halophyte salt cress using Arabidopsis microarray
-
Taji T, Seki M, Satou M, Sakurai T, Kobayashi M, Ishiyama K, Narusaka Y, Narusaka M, Zhu JK, Shinozaki K. 2004. Comparative genomics in salt tolerance between Arabidopsis and Arabidopsis-relaled halophyte salt cress using Arabidopsis microarray. Plant Physiology 135, 1697-1709.
-
(2004)
Plant Physiology
, vol.135
, pp. 1697-1709
-
-
Taji, T.1
Seki, M.2
Satou, M.3
Sakurai, T.4
Kobayashi, M.5
Ishiyama, K.6
Narusaka, Y.7
Narusaka, M.8
Zhu, J.K.9
Shinozaki, K.10
-
32
-
-
0042863923
-
Analysis of gene expression data using self-organizing maps
-
Toronen P, Kolehmainen M, Wong G, Castren E. 1999. Analysis of gene expression data using self-organizing maps. FEBS Letters 451, 142-146.
-
(1999)
FEBS Letters
, vol.451
, pp. 142-146
-
-
Toronen, P.1
Kolehmainen, M.2
Wong, G.3
Castren, E.4
-
33
-
-
22044437388
-
The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses
-
Touflghi K, Brady SM, Austin R, Ly E, Provart NJ. 2005. The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses. The Plant Journal 43, 153-163.
-
(2005)
The Plant Journal
, vol.43
, pp. 153-163
-
-
Touflghi, K.1
Brady, S.M.2
Austin, R.3
Ly, E.4
Provart, N.J.5
-
34
-
-
27244453164
-
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses
-
Usadel B, Nagel A, Thimm O, et al. 2005. Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses. Plant Physiology 138, 1195-1204.
-
(2005)
Plant Physiology
, vol.138
, pp. 1195-1204
-
-
Usadel, B.1
Nagel, A.2
Thimm, O.3
-
35
-
-
1642573246
-
Thellungiella halophila, a salt-tolerant relative of Arabidopsis thaliana, possesses effective mechanisms to discriminate between potassium and sodium
-
Volkov V, Wang B, Dominy PJ, Fricke W, Amtmann A. 2004. Thellungiella halophila, a salt-tolerant relative of Arabidopsis thaliana, possesses effective mechanisms to discriminate between potassium and sodium. Plant, Cell and Environment 27, 1-14.
-
(2004)
Plant, Cell and Environment
, vol.27
, pp. 1-14
-
-
Volkov, V.1
Wang, B.2
Dominy, P.J.3
Fricke, W.4
Amtmann, A.5
-
36
-
-
2442601878
-
-
Johns Hopkins University: Department of Biostatistics Working Papers, 2003
-
Wu Z, Irizarry R, Gentleman R, Murillo F, Spencer F. 2003. A model based background adjustment for oligonucleotide expression arrays. Johns Hopkins University: Department of Biostatistics Working Papers, 2003.
-
(2003)
A Model Based Background Adjustment for Oligonucleotide Expression Arrays
-
-
Wu, Z.1
Irizarry, R.2
Gentleman, R.3
Murillo, F.4
Spencer, F.5
-
37
-
-
0036273511
-
Cell signaling during cold, drought, and salt stress
-
Xiong L, Schumaker KS, Zhu JK. 2002. Cell signaling during cold, drought, and salt stress. The Plant Cell 14, S165-S183.
-
(2002)
The Plant Cell
, vol.14
-
-
Xiong, L.1
Schumaker, K.S.2
Zhu, J.K.3
-
38
-
-
0028370581
-
A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress
-
Yamaguchi-Shinozaki K, Shinozaki K. 1994. A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. The Plant Cell 6, 251-264.
-
(1994)
The Plant Cell
, vol.6
, pp. 251-264
-
-
Yamaguchi-Shinozaki, K.1
Shinozaki, K.2
-
39
-
-
0141502038
-
Regulation of ion homeostasis under salt stress
-
Zhu JK. 2003. Regulation of ion homeostasis under salt stress. Current Opinion in Plant Biology 6, 441-445.
-
(2003)
Current Opinion in Plant Biology
, vol.6
, pp. 441-445
-
-
Zhu, J.K.1
-
40
-
-
13444264729
-
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox
-
Zimmermann P, Hirsch-Hoffmann M, Hennig L, Gruissem W. 2004. GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiology 136, 2621-2632.
-
(2004)
Plant Physiology
, vol.136
, pp. 2621-2632
-
-
Zimmermann, P.1
Hirsch-Hoffmann, M.2
Hennig, L.3
Gruissem, W.4
|