-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann RI Ludwig W Schleifer KH 1995 Phylogenetic identification and in situ detection of individual microbial cells without cultivation Microbiol Rev 59 143 169
-
(1995)
Microbiol Rev
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
3
-
-
0028126829
-
The phylogeny of the genus Clostridium proposal of five new genera and eleven new species combinations
-
Collins MD Lawson PA Willems A Cordoba JJ Fernandez-Garayzabal J Garcia P Cai J Hippe H Farrow JA 1994 The phylogeny of the genus Clostridium proposal of five new genera and eleven new species combinations Int J Syst Bacteriol 44 812 826
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.9
-
5
-
-
0025855242
-
The control and consequences of bacterial fermentation in the human colon
-
Cummings JH Macfarlane GT 1991 The control and consequences of bacterial fermentation in the human colon J Appl Bacteriol 70 443 459
-
(1991)
J Appl Bacteriol
, vol.70
, pp. 443-459
-
-
Cummings, J.H.1
MacFarlane, G.T.2
-
6
-
-
0344172842
-
The domain-specific probe Eub338 is insufficient for the detection of all bacteria development and evaluation of a more comprehensive probe set
-
Daims H Bruhl A Amann R Schleifer KH Wagner M 1999 The domain-specific probe Eub338 is insufficient for the detection of all bacteria development and evaluation of a more comprehensive probe set Syst Appl Microbiol 22 434 444
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 434-444
-
-
Daims, H.1
Bruhl, A.2
Amann, R.3
Schleifer, K.H.4
Wagner, M.5
-
7
-
-
0026425946
-
Comparison of carbohydrate substrate preferences in eight species of bifidobacteria
-
Degnan BA Macfarlane GT 1991 Comparison of carbohydrate substrate preferences in eight species of bifidobacteria FEMS Microbiol Lett 68 151 156
-
(1991)
FEMS Microbiol Lett
, vol.68
, pp. 151-156
-
-
Degnan, B.A.1
MacFarlane, G.T.2
-
8
-
-
0035048585
-
Isolation and antimicrobial susceptibility testing of fecal strains of the archaeon Methanobrevibacter smithii
-
Dermoumi HL Ansorg RA 2001 Isolation and antimicrobial susceptibility testing of fecal strains of the archaeon Methanobrevibacter smithii Chemotherapy 47 177 183
-
(2001)
Chemotherapy
, vol.47
, pp. 177-183
-
-
Dermoumi, H.L.1
Ansorg, R.A.2
-
11
-
-
0031692488
-
Variations of bacterial populations in human feces quantified by fluorescence in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes
-
Franks AH Harmsen HJM Raangs GC Jansen GJ Schut F Welling GW 1998 Variations of bacterial populations in human feces quantified by fluorescence in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes Appl Environ Microbiol 64 3336 3345
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3336-3345
-
-
Franks, A.H.1
Harmsen, H.J.M.2
Raangs, G.C.3
Jansen, G.J.4
Schut, F.5
Welling, G.W.6
-
12
-
-
0033966699
-
Comparison of viable cell counts and fluorescence in situ hybridization using specific rRNA-based probes for the quantification of human faecal bacteria
-
Harmsen HJM Gibson GR Elfferich P Degener JE Welling GW 2000a Comparison of viable cell counts and fluorescence in situ hybridization using specific rRNA-based probes for the quantification of human faecal bacteria FEMS Microbiol Lett 183 125 129
-
(2000)
FEMS Microbiol Lett
, vol.183
, pp. 125-129
-
-
Harmsen, H.J.M.1
Gibson, G.R.2
Elfferich, P.3
Degener, J.E.4
Welling, G.W.5
-
13
-
-
0033781871
-
Development of 16S rRNA-based probes for the Coriobacterium group and the Atopobium cluster and their application for enumeration of Coriobacteriaceae in human feces from volunteers of different age groups
-
Harmsen HJM Wildeboer-Veloo AC Grijpstra J Knol J Degener JE Welling GW 2000b Development of 16S rRNA-based probes for the Coriobacterium group and the Atopobium cluster and their application for enumeration of Coriobacteriaceae in human feces from volunteers of different age groups Appl Environ Microbiol 66 4523 4527
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 4523-4527
-
-
Harmsen, H.J.M.1
Wildeboer-Veloo, A.C.2
Grijpstra, J.3
Knol, J.4
Degener, J.E.5
Welling, G.W.6
-
15
-
-
0037478707
-
Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces
-
Hold G Schwiertz A Aminov R Blaut M Flint HJ 2003 Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces Appl Environ Microbiol 69 4320 4324
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 4320-4324
-
-
Hold, G.1
Schwiertz, A.2
Aminov, R.3
Blaut, M.4
Flint, H.J.5
-
17
-
-
0037392977
-
Nondigestible oligosaccharides enhance bacterial colonization resistance against Clostridium difficile in vitro
-
Hopkins MJ Macfarlane GT 2003 Nondigestible oligosaccharides enhance bacterial colonization resistance against Clostridium difficile in vitro Appl Environ Microbiol 69 1920 1927
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1920-1927
-
-
Hopkins, M.J.1
MacFarlane, G.T.2
-
18
-
-
0034859791
-
Expression of ribosome modulation factor (RMF) in Escherichia coli requires ppGpp
-
Izutsu K Wada A Wada C 2001 Expression of ribosome modulation factor (RMF) in Escherichia coli requires ppGpp Cells 6 665 676
-
(2001)
Cells
, vol.6
, pp. 665-676
-
-
Izutsu, K.1
Wada, A.2
Wada, C.3
-
19
-
-
0032782895
-
Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria
-
Jansen GJ Wildeboer-Veloo AC Tonk RH Franks AH Welling GW 1999 Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria J Microbiol Meth 37 215 221
-
(1999)
J Microbiol Meth
, vol.37
, pp. 215-221
-
-
Jansen, G.J.1
Wildeboer-Veloo, A.C.2
Tonk, R.H.3
Franks, A.H.4
Welling, G.W.5
-
20
-
-
0034764268
-
Diagnostic examination of human intestinal spirochetosis by fluorescent in situ hybridization for Brachyspira aalborgi, Brachyspira pilosicoli, and other species of the genus Brachyspira (Serpulina)
-
Jensen TK Boye M Ahrens P Korsager B Teglbjaerg PS Lindboe CF Moller K 2001 Diagnostic examination of human intestinal spirochetosis by fluorescent in situ hybridization for Brachyspira aalborgi, Brachyspira pilosicoli, and other species of the genus Brachyspira (Serpulina) J Clin Microbiol 39 4111 4118
-
(2001)
J Clin Microbiol
, vol.39
, pp. 4111-4118
-
-
Jensen, T.K.1
Boye, M.2
Ahrens, P.3
Korsager, B.4
Teglbjaerg, P.S.5
Lindboe, C.F.6
Moller, K.7
-
22
-
-
0033971686
-
Fluorescent in situ hybridization allows rapid identification of microorganisms in blood cultures
-
Kempf VA Trebesius K Autenrieth IB 2000 Fluorescent in situ hybridization allows rapid identification of microorganisms in blood cultures J Clin Microbiol 38 830 838
-
(2000)
J Clin Microbiol
, vol.38
, pp. 830-838
-
-
Kempf, V.A.1
Trebesius, K.2
Autenrieth, I.B.3
-
24
-
-
0035958678
-
Role of inorganic polyphosphate in promoting ribosomal protein degradation by the Lon protease in E. coli
-
Kuroda A Nomura K Ohtomo R Kato J Ikeda T Takiguchi N Ohtake H Kornberg A 2001 Role of inorganic polyphosphate in promoting ribosomal protein degradation by the Lon protease in E. coli Science 293 614 615
-
(2001)
Science
, vol.293
, pp. 614-615
-
-
Kuroda, A.1
Nomura, K.2
Ohtomo, R.3
Kato, J.4
Ikeda, T.5
Takiguchi, N.6
Ohtake, H.7
Kornberg, A.8
-
26
-
-
0031923090
-
Phylogenetic analysis of methanobrevibacter isolated from feces of humans and other animals
-
Lin C Miller TL 1998 Phylogenetic analysis of methanobrevibacter isolated from feces of humans and other animals Arch Microbiol 169 397 403
-
(1998)
Arch Microbiol
, vol.169
, pp. 397-403
-
-
Lin, C.1
Miller, T.L.2
-
27
-
-
0036795787
-
Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
-
Loy A Lehner A Lee N Adamczyk J Meier H Ernst J Schleifer KH Wagner M 2002 Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment Appl Environ Microbiol 68 5064 5081
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 5064-5081
-
-
Loy, A.1
Lehner, A.2
Lee, N.3
Adamczyk, J.4
Meier, H.5
Ernst, J.6
Schleifer, K.H.7
Wagner, M.8
-
28
-
-
0030628034
-
Human colonic microbiota ecology, physiology and metabolic potential of intestinal bacteria
-
Macfarlane GT Macfarlane S 1997 Human colonic microbiota ecology, physiology and metabolic potential of intestinal bacteria Scand J Gastroenterol Suppl 222 3 9
-
(1997)
Scand J Gastroenterol Suppl
, vol.222
, pp. 3-9
-
-
MacFarlane, G.T.1
MacFarlane, S.2
-
31
-
-
0024445045
-
Influence of retention time on degradation of pancreatic enzymes by human colonic bacteria grown in a 3-stage continuous culture system
-
Macfarlane GT Cummings JH Macfarlane S Gibson GR 1989 Influence of retention time on degradation of pancreatic enzymes by human colonic bacteria grown in a 3-stage continuous culture system J Appl Bacteriol 67 521 527
-
(1989)
J Appl Bacteriol
, vol.67
, pp. 521-527
-
-
MacFarlane, G.T.1
Cummings, J.H.2
MacFarlane, S.3
Gibson, G.R.4
-
32
-
-
0026586542
-
Comparison of fermentation reactions in different regions of the human colon
-
Macfarlane GT Gibson GR Cummings JH 1992 Comparison of fermentation reactions in different regions of the human colon J Appl Bacteriol 72 57 64
-
(1992)
J Appl Bacteriol
, vol.72
, pp. 57-64
-
-
MacFarlane, G.T.1
Gibson, G.R.2
Cummings, J.H.3
-
33
-
-
0031944894
-
Validation of a three-stage compound continuous culture system for investigating the effect of retention time on the ecology and metabolism of bacteria in the human colon
-
Macfarlane GT Macfarlane S Gibson GR 1998 Validation of a three-stage compound continuous culture system for investigating the effect of retention time on the ecology and metabolism of bacteria in the human colon Microb Ecol 35 180 187
-
(1998)
Microb Ecol
, vol.35
, pp. 180-187
-
-
MacFarlane, G.T.1
MacFarlane, S.2
Gibson, G.R.3
-
34
-
-
9344247522
-
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment
-
Manz W Amann R Ludwig W Vancanneyt M Schleifer KH 1996 Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment Microbiology 142 1097 1106
-
(1996)
Microbiology
, vol.142
, pp. 1097-1106
-
-
Manz, W.1
Amann, R.2
Ludwig, W.3
Vancanneyt, M.4
Schleifer, K.H.5
-
35
-
-
0016167941
-
Human fecal flora the normal flora of 20 Japanese-Hawaiians
-
Moore WEC Holdeman LV 1974 Human fecal flora the normal flora of 20 Japanese-Hawaiians Appl Microbiol 27 961 979
-
(1974)
Appl Microbiol
, vol.27
, pp. 961-979
-
-
Moore, W.E.C.1
Holdeman, L.V.2
-
36
-
-
0034088917
-
In vitro fermentability of dextran, oligodextran and maltodextrin by human gut bacteria
-
Olano-Martin E Mountzouris KC Gibson GR Rastall RA 2000 In vitro fermentability of dextran, oligodextran and maltodextrin by human gut bacteria Br J Nutr 83 247 255
-
(2000)
Br J Nutr
, vol.83
, pp. 247-255
-
-
Olano-Martin, E.1
Mountzouris, K.C.2
Gibson, G.R.3
Rastall, R.A.4
-
37
-
-
0033986423
-
Quantification of different Eubacterium spp. in human fecal samples with species-specific 16S rRNA-targeted oligonucleotide probes
-
Schwiertz A Le Blay G Blaut M 2000 Quantification of different Eubacterium spp. in human fecal samples with species-specific 16S rRNA-targeted oligonucleotide probes Appl Environ Microbiol 66 375 382
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 375-382
-
-
Schwiertz, A.1
Le Blay, G.2
Blaut, M.3
-
38
-
-
0031820475
-
Design and evaluation of a Lactobacillus group-specific ribosomal RNA-targeted hybridization probe and its application to the study of intestinal microecology in pigs
-
Sghir A Antonopoulos D Mackie RI 1998 Design and evaluation of a Lactobacillus group-specific ribosomal RNA-targeted hybridization probe and its application to the study of intestinal microecology in pigs Syst Appl Microbiol 21 291 296
-
(1998)
Syst Appl Microbiol
, vol.21
, pp. 291-296
-
-
Sghir, A.1
Antonopoulos, D.2
MacKie, R.I.3
-
41
-
-
0035114224
-
Identification by in situ hybridization of segmented filamentous bacteria in the intestine of diarrheic rainbow trout (Oncorhynchus mykiss)
-
Urdaci MC Regnault B Grimont PA 2001 Identification by in situ hybridization of segmented filamentous bacteria in the intestine of diarrheic rainbow trout (Oncorhynchus mykiss) Res Microbiol 152 67 73
-
(2001)
Res Microbiol
, vol.152
, pp. 67-73
-
-
Urdaci, M.C.1
Regnault, B.2
Grimont, P.A.3
-
42
-
-
22144439446
-
PH and peptide supply can radically alter bacterial populations and short-chain fatty acids ratios within microbial communities from the human colon
-
Walker AW Duncan SH McWilliam Leitch C Child MW Flint HJ 2005 pH and peptide supply can radically alter bacterial populations and short-chain fatty acids ratios within microbial communities from the human colon Appl Environ Microbiol 71 3692 3700
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 3692-3700
-
-
Walker, A.W.1
Duncan, S.H.2
McWilliam3
Leitch, C.4
Child, M.W.5
Flint, H.J.6
-
43
-
-
0026490020
-
Species-specific oligonucleotide probes for five Bifidobacterium species detected in human intestinal microbiota
-
Yamamoto T Morotomi M Tanaka R 1992 Species-specific oligonucleotide probes for five Bifidobacterium species detected in human intestinal microbiota Appl Environ Microbiol 58 4076 4079
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 4076-4079
-
-
Yamamoto, T.1
Morotomi, M.2
Tanaka, R.3
-
45
-
-
0031684010
-
Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria
-
Zoetendal EG Akkermans DL De Vos WM 1998 Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria Appl Environ Microbiol 64 3854 3859
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3854-3859
-
-
Zoetendal, E.G.1
Akkermans, D.L.2
De Vos, W.M.3
|