Retrolyc1 subfamilies defined by different U3 LTR regulatory regions in the Lycopersicon genus

Molecular Genetics and Genomics

Volumn 266, Issue 1, 2001, Pages 35-41

  Araujo, P G ^a   Casacuberta, J M ^b   Costa, A P P ^a   Hashimoto, R Y ^a   Grandbastien, M A ^c   Van Sluys, M A ^a  

^a R do Matao 277 05508 900 Cd U   (Brazil)

^b INSTITUT DE BIOLOGIA MOLECULAR DE BARCELONA   (Spain)

^c CEMAGREF   (France)

Author keywords

Genus Lycopersicon; Retrotransposon; Transcription

Indexed keywords

ARTICLE; BASE PAIRING; DNA FLANKING REGION; GENE EXPRESSION REGULATION; GENE LIBRARY; MULTIGENE FAMILY; NONHUMAN; PLANT GROWTH; POLYADENYLATION; PRIORITY JOURNAL; PROTEIN DOMAIN; RETROPOSON; SEQUENCE ANALYSIS; TRANSCRIPTION REGULATION; VIRUS PARTICLE;

BASE SEQUENCE; DNA, PLANT; LYCOPERSICON ESCULENTUM; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROMOTER REGIONS (GENETICS); REGULATORY SEQUENCES, NUCLEIC ACID; RETROELEMENTS; SEQUENCE HOMOLOGY, NUCLEIC ACID; TERMINAL REPEAT SEQUENCES; TRANSCRIPTION, GENETIC;

EID: 0034880942     PISSN: 16174615     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004380100514     Document Type: Article

References (18)

1. Transposable element contributions to plant gene and genome evolution
2. Plant regeneration from mesophyll protoplasts of several Nicotiana species
3. Characterization of LTR sequences involved in the protoplast specific expression of the tobacco Tnt1 retrotransposon
4. Sequence variability within the tobacco retrotransposon Tnt1 population
5. Quasispecies in retrotransposons: A role for sequence variability in Tnt1 evolution
6. Retrolyc1, a member of the Tnt1 retrotransposon super-family in the Lycopersicon peruvianum genome
7. A Plant DNA mini preparation version II
8. Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics
9. Estimation of evolutionary distances between homologous nucleotide sequences
10. Plant retrotransposons
11. DnaSP version 2.0: A novel software package for extensive molecular population genetic analysis
12. The neighbor-joining method: A new method for reconstructing phylogenetic trees
13. Negative effect of the 5′-untranslated leader sequence on Ac transposon promoter expression
14. A 13-bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors
15. Reverse transcription in bacteria
16. In vivo characterization of transcriptional regulatory sequences involved in the defense-associated expression of the tobacco retrotransposon Tnt1
17. The evolutionary analysis of the Tnt1 retrotransposon in Nicotiana species reveals the high variability of its regulatory sequences