Color genes in the orchid Oncidium Gower Ramsey: Identification, expression, and potential genetic instability in an interspecific cross

Planta

Volumn 223, Issue 3, 2006, Pages 521-531

  Hieber, A David ^a   Mudalige Jayawickrama, Rasika G ^a   Kuehnle, Adelheid R ^a  

^a UNIVERSITY OF HAWAII   (United States)

Author keywords

Anthocyanins; Biosynthesis genes; Carotenoids; Orchidaceae; Violaxanthin

Indexed keywords

9 CIS EPOXY CAROTENOID DIOXYGENASE; 9-CIS-EPOXY-CAROTENOID DIOXYGENASE; ALCOHOL DEHYDROGENASE; ANTHOCYANIN; CAROTENOID; DIHYDROFLAVANOL 4 REDUCTASE; DIHYDROFLAVANOL 4-REDUCTASE; ISOMERASE; OXIDOREDUCTASE; OXYGENASE; PHYTOENE DEHYDROGENASE; PHYTOENE SYNTHASE; TRANSFERASE; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BIOSYNTHESIS; CROSS BREEDING; ENZYMOLOGY; GENE; GENETICS; GENOMIC INSTABILITY; HISTOLOGY; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; ORCHIDACEAE; PIGMENTATION; SEQUENCE ALIGNMENT;

ALCOHOL OXIDOREDUCTASES; ALKYL AND ARYL TRANSFERASES; AMINO ACID SEQUENCE; ANTHOCYANINS; BASE SEQUENCE; CAROTENOIDS; CROSSES, GENETIC; GENES, PLANT; GENOMIC INSTABILITY; ISOMERASES; MOLECULAR SEQUENCE DATA; ORCHIDACEAE; OXIDOREDUCTASES; OXYGENASES; PIGMENTATION; PLANT PROTEINS; SEQUENCE ALIGNMENT;

BROMHEADIA; DENDROBIUM; MAGNOLIOPHYTA; ONCIDIUM; ORCHIDACEAE;

EID: 33644652170     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-005-0113-z     Document Type: Article

References (62)

1. Adams KL, Percifield R, Wendel JF (2004) Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid. Genetics 168:2217-2226
2. Al-Babili S, Hugueney P, Schledz M, Welsch R, Frohnmeyer H, Laule O, Beyer P (2000) Identification of a novel gene coding for neoxanthin synthase from Solanum tuberosum. FEBS Lett 485:168-172
3. Arditti J (1992) Fundamentals of orchid biology. Wiley, New York
4. Beld M, Martin C, Huits H, Stuitje AR, Gerats AGM (1989) Flavonoid synthesis in Petunia hybrida: partial characterization of dihydroflavonol-4- reductase genes. Plant Mol Biol 13:491-502
5. Bouvier F, d'Harlingue A, Backhaus RA, Kumagai MH, Camara B (2000) Identification of neoxanthin synthase as a carotenoid cyclase paralog. Eur J Biochem 267:6346-6352
6. Camara B (1993) Plant phytoene synthase complex: component enzymes, immunology, and biogenesis. Methods Enzymol 214:352-365
7. Camara B, Moneger R (1978) Free and esterified carotenoids in green and red fruits of Capsicum annuum. Phytochem 17:91-93
8. Charanasri U, Kamemoto H (1975) Additional chromosome numbers in Oncidium and allied genera. Am Orchid Soc Bull 44:686-691
9. Chernys JT, Zeevaart JA (2000) Characterization of the 9-cis-epoxycarotenoid dioxygenase gene family and the regulation of abscisic acid biosynthesis in avocado. Plant Physiol 124:343-353
10. Church GM, Gilbert W (1984) Genomic sequencing. Proc Natl Acad Sci USA 81:1991-1995
11. Cunningham FX (2002) Regulation of carotenoid synthesis and accumulation in plants. Pure Appl Chem 74:1409-1417
12. Cunningham FX, Gantt E (1998) Genes and enzymes of carotenoid biosynthesis in plants. Annu Rev Plant Physiol Plant Mol Biol 49:557-583
13. Cunningham FX, Gantt E (2001) One ring or two? Determination of ring number in carotenoids by lycopene epsilon-cyclases. Proc Natl Acad Sci USA 98:2905-2910
14. Davies KM (2000) Plant colour and fragrance. In: Verpoorte R, Alfermann AW (eds) Metabolic engineering of plant secondary metabolism. Kluwer, Dordrecht, pp 127-163
15. Feldman M, Levy AA (2005) Allopolyploidy - a shaping force in the evolution of wheat genomes. Cytogenet Genome Res 109:250-258
16. Fourney RM, Miyakoshi J, Day RS III, Paterson MC (1988) Northern blotting: efficient RNA staining and transfer. Focus 10:5-7
17. Gau W, Ploschke H-J, Wünsche C (1983) Mass spectrometric identification of xanthophyll fatty acid esters from marigold flowers (Tagetes erecta) obtained by high performances liquid chromatography and Craig counter-current distribution. J Chromatogr 262:277-284
18. 18 high-performance liquid chromatographic column. J Chromatogr 543:137-145
19. Giuliano G, Bartley GE, Scolnik PA (1993) Regulation of carotenoid biosynthesis during tomato development. Plant Cell 5:379-387
20. Griesbach RJ (1984) Effects of carotenoid-anthocyanin combinations on flower color. J Heredity 75:145-147
21. Hahlbrock H, Griesbach H (1975) Biosynthesis of flavonoids. In: Harborne JB, Mabry TJ, Mabry H (eds) The flavonoids. Academic, San Diego, pp 866-915
22. Helariutta Y, Elomaa P, Kotilainen M, Seppänen P, Teeri TH (1993) Cloning of cDNA coding for dihydroflavonol-4-reductase (DFR) and characterization of dfr expression in the corollas of Gerbera hybrida var. Regina (Compositae). Plant Mol Biol 22:183-193
23. Hirschberg J (2001) Carotenoid biosynthesis in flowering plants. Curr Opin Plant Biol 4:210-218
24. Holton TA, Cornish EC (1995) Genetics and biochemistry of anthocyanin biosynthesis. Plant Cell 7:1071-1083
25. Huits HSM, Gerats AGM, Kreike MM, Mol JNM, Koes RE (1994) Genetic control of dihydroflavonol 4-reductase gene expression in Petunia hybrida. Plant J 6:295-310
26. Iuchi S, Kobayashi M, Taji T, Naramoto M, Seki M, Kato T, Tabata S, Kakubari Y, Yamaguchi-Shinozaki K, Shinozaki K (2001) Regulation of drought tolerance by gene manipulation of 9-cis-epoxycarotenoid dioxygenase, a key enzyme in abscisic acid biosynthesis in Arabidopsis. Plant J 27:325-333
27. Johnson ET, Yi H, Shin B, Oh BJ, Cheong H, Choi G (1999) Cymbidium hybrida dihydroflavonol 4-reductase does not efficiently reduce dihydrokaempferol to produce orange pelargonidin-type anthocyanins. Plant J 19:81-85
28. Johnson ET, Ryu S, Yi H, Shin B, Cheong H, Choi G (2001) Alteration of a single amino acid changes the substrate specificity of dihydroflavonol 4-reductase. Plant J 25:325-333
29. Karvouni Z, John I, Taylor JE, Watson CF, Turner AJ, Grierson D (1995) Isolation and characterisation of a melon cDNA clone encoding phytoene synthase. Plant Mol Biol 27:1153-1162
30. Kashkush K, Feldman M, Levy AA (2002) Gene loss, silencing and activation in a newly synthesized wheat allotetraploid. Genetics 160:1651-1659
31. Kuehnle AR (1997) Molecular biology of orchids. In: Arditti J, Pridgeon AM (eds) Orchid biology: reviews and perspectives VII. Kluwer, London, pp 75-115
32. Kuehnle AR, Lewis DH, Markham KR, Mitchell KA, Davies KM, Jordan BR (1997) Floral flavonoids and pH in Dendrobium orchid species and hybrids. Euphytica 95:187-194
33. Liew CF, Loh CS, Goh CJ, Lim SH (1998) The isolation, molecular characterization and expression of dihydroflavonol 4-reductase cDNA in the orchid, Bromheadia finlaysoniana. Plant Sci 135:161-169
34. Liu B, Wendel JF (2003) Epigenetic phenomena and the evolution of plant allopolyploids. Mol Phylogenet Evol 29:365-379
35. Liu B, Vega JM, Feldman M (1998) Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. II. Changes in low-copy coding DNA sequences. Genome 41:535-542
36. Lowry JB, Keong SC (1973) A preliminary study of Malaysian orchid pigments. Malays J Sci 2:115-121
37. Matsui S (1994) Floral carotenoids in species and hybrids of the Laeliinae. Lindleyana 9:213-217
38. Matsui S, Nakamura M (1988) Distribution of flower pigments in perianth of Cattleya and allied genera. I. Species. J Jpn Soc Hortic Sci 57:222-232
39. Moehs CP, Tian L, Osteryoung KW, DellaPenna D (2001) Analysis of carotenoid biosynthetic gene expression during marigold petal development. Plant Mol Biol 45:281-293
40. Moir WW, Moir MA (1982) Creating oncidiinae intergenerics. University of Hawaii Press, Honolulu
41. Morris WL, Ducreux L, Griffiths DW, Stewart D, Davies HV, Taylor MA (2004) Carotenogenesis during tuber development and storage in potato. J Exp Bot 55:975-982
42. Mudalige RM, Kuehnle AR (2004) Orchid biotechnology in production and improvement. HortSci 39:11-17
43. Mudalige RM, Kuehnle AR, Amore TD (2003) Pigment distribution and epidermal cell shape in Dendrobium species and hybrids. HortSci 38:573-577
44. Mudalige-Jayawickrama RG, Champagne MM, Hieber AD, Kuehnle AR (2005) Cloning and characterization of two anthocyanin biosynthetic genes from Dendrobium orchid. J Am Soc Hort Sci 130:611-618
45. Murashige T, Skoog F (1962) A revised medium for rapid growth and bio-assays with tobacco tissue cultures. Physiol Planta 15:473-497
46. Osborn TC, Pires JC, Birchler JA, Auger DL, Chen ZJ, Lee HS, Comai L, Madlung A, Doerge RW, Colot V, Martienssen RA (2003) Understanding mechanisms of novel gene expression in polyploids. Trends Genet 19:141-147
47. Qin X, Zeevaart JA (1999) The 9-cis-epoxycarotenoid cleavage reaction is the key regulatory step of abscisic acid biosynthesis in water-stressed bean. Proc Natl Acad Sci USA 96:15354-15361
48. Rivas JD (1989) Reversed-phase high-performance liquid chromatographic separation of lutein and lutein fatty acid esters from marigold flower petal powder. J Chromatogr 464:442-447
49. Sandmann G (2001) Genetic manipulation of carotenoid biosynthesis: strategies, problems and achievements. Trends Plant Sci 6:14-17
50. Schiedt K, Liaaen-Jensen S (1995) Isolation and analysis. In: Britton G, Liaaen-Jensen S, Pfander H (eds) Carotenoids: isolation and analysis, vol 1A. Birkhauser Verlag, Berlin, pp 81-108
51. Schledz M, Al-Babili S, von LJ, Haubruck H, Rabbani S, Kleinig H, Beyer P (1996) Phytoene synthase from Narcissus pseudonarcissus: functional expression, galactolipid requirement, topological distribution in chromoplasts and induction during flowering. Plant J 10:781-792
52. Schwartz SH, Tan BC, Gage DA, Zeevaart JA, McCarty DR (1997) Specific oxidative cleavage of carotenoids by VP14 of maize. Science 276:1872-1874
53. Schwartz SH, Tan BC, McCarty DR, Welch W, Zeevaart JA (2003) Substrate specificity and kinetics for VP14, a carotenoid cleavage dioxygenase in the ABA biosynthetic pathway. Biochim Biophys Acta 1619:9-14
54. Shaked H, Kashkush K, Ozkan H, Feldman M, Levy AA (2001) Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat. Plant Cell 13:1749-1759
55. Song K, Lu P, Tang K, Osborn TC (1995) Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution. Proc Natl Acad Sci USA 92:7719-7723
56. Tan BC, Joseph LM, Deng WT, Liu L, Li QB, Cline K, McCarty DR (2003) Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family. Plant J 35:44-56
57. Thammasiri K, Tang CS, Yamamoto HY, Kamemoto H (1986) Carotenoids and chlorophylls in yellow-flowered Dendrobium species. Lindleyana 1:215-218
58. Wendel JF (2000) Genome evolution in polyploids. Plant Mol Biol 42:225-249
59. Winkel-Shirley B (2001) Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology. Plant Physiol 126:485-493
60. Xie D-Y, Jackson LA, Cooper JD, Ferreira D, Paiva NL (2004) Molecular and biochemical analysis of two cDNA clones encoding dihydroflavonol-4-reductase from Medicago truncatula. Plant Physiol 134:979-994
61. Zhu C, Yamamura S, Koiwa H, Nishihara M, Sandmann G (2002) cDNA cloning and expression of carotenogenic genes during flower development in Gentiana lutea. Plant Mol Biol 48:277-285
62. Zufall RA, Rausher MD (2004) Genetic changes associated with floral adaptation restrict future evolutionary potential. Nature 428:847-850