메뉴 건너뛰기




Volumn 32, Issue WEB SERVER ISS., 2004, Pages

The CHAOS/DIALIGN WWW server for multiple alignment of genomic sequences

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; COMPUTER SYSTEM; CONTROLLED STUDY; GENE SEQUENCE; GENETIC DATABASE; ONLINE SYSTEM; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SYSTEM ANALYSIS;

EID: 3242889413     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh361     Document Type: Article
Times cited : (54)

References (18)
  • 1
    • 2942579268 scopus 로고    scopus 로고
    • The conserved exon method for gene finding
    • Bafna,V. and Huson,D.H. (2000) The conserved exon method for gene finding. Bioinformatics, 16, 190-202.
    • (2000) Bioinformatics , vol.16 , pp. 190-202
    • Bafna, V.1    Huson, D.H.2
  • 2
    • 0033861549 scopus 로고    scopus 로고
    • Human and mouse gene structure: Comparative analysis and application to exon prediction
    • Batzoglou,S., Pachter,L., Mesirov,J.P., Berger,B. and Lander,E.S. (2000) Human and mouse gene structure: comparative analysis and application to exon prediction. Genome Res., 10, 950-958.
    • (2000) Genome Res. , vol.10 , pp. 950-958
    • Batzoglou, S.1    Pachter, L.2    Mesirov, J.P.3    Berger, B.4    Lander, E.S.5
  • 3
    • 17444437765 scopus 로고    scopus 로고
    • Integrating genomic homology into gene structure prediction
    • Korf,I., Flicek,P., Duan,D. and Brent,M.R. (2001) Integrating genomic homology into gene structure prediction. Bioinformatics, 17, S140-S148.
    • (2001) Bioinformatics , vol.17
    • Korf, I.1    Flicek, P.2    Duan, D.3    Brent, M.R.4
  • 4
    • 0034832202 scopus 로고    scopus 로고
    • SGP-1: Prediction and validation of homologous genes based on sequence alignments
    • Wiehe,T., Gebauer-Jung,S., Mitchell-Olds,T. and Guigó,R. (2001) SGP-1: Prediction and validation of homologous genes based on sequence alignments. Genome Res., 11, 1574-1583.
    • (2001) Genome Res. , vol.11 , pp. 1574-1583
    • Wiehe, T.1    Gebauer-Jung, S.2    Mitchell-Olds, T.3    Guigó, R.4
  • 6
    • 0034616398 scopus 로고    scopus 로고
    • Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons
    • Loots,G.G., Locksley,R.M., Blankespoor,C.M., Wang,Z.E., Miller,W. Rubin,E.M. and Frazer,K.A. (2000) Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. Science, 288, 136-140.
    • (2000) Science , vol.288 , pp. 136-140
    • Loots, G.G.1    Locksley, R.M.2    Blankespoor, C.M.3    Wang, Z.E.4    Miller, W.5    Rubin, E.M.6    Frazer, K.A.7
  • 8
    • 3242889992 scopus 로고    scopus 로고
    • Surveying phylogenetic footprints in large gene clusters: Applications to hox cluster duplications
    • in press
    • Prohaska,S. Fried,C., Flamm,C., Wagner,G.P. and Stadler,P.F. Surveying phylogenetic footprints in large gene clusters: applications to hox cluster duplications. Mol. Evol. Phylog., in press.
    • Mol. Evol. Phylog.
    • Prohaska, S.1    Fried, C.2    Flamm, C.3    Wagner, G.P.4    Stadler, P.F.5
  • 9
    • 0344179079 scopus 로고    scopus 로고
    • Independent hox-cluster duplications in lampreys
    • Fried,C., Prohaska,S. and Stadler,P. (2003) Independent hox-cluster duplications in lampreys. J. Exp. Zool. Part B, 299: 18-25.
    • (2003) J. Exp. Zool. , vol.299 , Issue.PART B , pp. 18-25
    • Fried, C.1    Prohaska, S.2    Stadler, P.3
  • 11
    • 0035011227 scopus 로고    scopus 로고
    • Comparison of genomic DNA sequences: Solved and unsolved problems
    • Miller,W. (2001) Comparison of genomic DNA sequences: solved and unsolved problems. Bioinformatics, 17, 391-397.
    • (2001) Bioinformatics , vol.17 , pp. 391-397
    • Miller, W.1
  • 12
    • 0142056169 scopus 로고    scopus 로고
    • An applications-focused review of comparative genomics tools: Capabilities, limitations, and future challenges
    • Chain,P., Kurtz,S., Ohlebusch,E. and Slezak,T. (2003) An applications-focused review of comparative genomics tools: capabilities, limitations, and future challenges. Brief. Bioinform., 4, 105-123.
    • (2003) Brief. Bioinform. , vol.4 , pp. 105-123
    • Chain, P.1    Kurtz, S.2    Ohlebusch, E.3    Slezak, T.4
  • 13
    • 0029861894 scopus 로고    scopus 로고
    • Multiple DNA and protein sequence alignment based on segment-to-segment comparison
    • Morgenstern,B., Dress,A., and Werner,T. (1996) Multiple DNA and protein sequence alignment based on segment-to-segment comparison. Proc. Natl Acad. Sci., USA, 93, 12098-12103.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 12098-12103
    • Morgenstern, B.1    Dress, A.2    Werner, T.3
  • 14
    • 0032945593 scopus 로고    scopus 로고
    • DIALIGN 2: Improvement of the segment-to-segment approach to multiple sequence alignment
    • Morgenstern,B. (1999) DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment. Bioinformatics, 15, 211-218.
    • (1999) Bioinformatics , vol.15 , pp. 211-218
    • Morgenstern, B.1
  • 18
    • 0037398368 scopus 로고    scopus 로고
    • NISC Comparative Sequencing Program LAGAN and multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA
    • Brudno,M.,Do,C.B., Cooper,G.M., Kim,M.F.,Davydov,E., Green, E.D., Sidow, A., Batzoglou, S. NISC Comparative Sequencing Program (2003) LAGAN and multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA. Genome Res., 13, 721-731.
    • (2003) Genome Res. , vol.13 , pp. 721-731
    • Brudno, M.1    Do, C.B.2    Cooper, G.M.3    Kim, M.F.4    Davydov, E.5    Green, E.D.6    Sidow, A.7    Batzoglou, S.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.