Human and mouse gene structure: Comparative analysis and application to exon prediction

Genome Research

Volumn 10, Issue 7, 2000, Pages 950-958

  Batzoglou, Serafim ^a,d   Pachter, Lior ^b   Mesirov, Jill P ^c   Berger, Bonnie ^a,d   Lander, Eric S ^c,d  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c WHITEHEAD INSTITUTE FOR BIOMEDICAL RESEARCH   (United States)

^d MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPARATIVE STUDY; CONTROLLED STUDY; EXON; GENE LOCUS; GENE SEQUENCE; GENE STRUCTURE; GENETIC ANALYSIS; GENETIC CODE; GENETIC CONSERVATION; HUMAN; INTRON; MOUSE; NONHUMAN; PREDICTION; PRIORITY JOURNAL; SPECIES DIFFERENCE;

AMINO ACIDS; ANIMALS; CODON; EXONS; GENES; GENETIC MARKERS; GENOMIC LIBRARY; HUMANS; INTRONS; MICE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOFTWARE; SPECIES SPECIFICITY; SPLICEOSOMES;

RODENTIA;

EID: 0033861549     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.10.7.950     Document Type: Article

References (21)

1. Sequence of the gene encoding the human M1 muscarinic acetylcholine receptor
2. Genomes and evolution - Overview
3. Identification of genes in human genomic DNA
4. Prediction of complete gene structures in human genomic DNA
5. Evaluation of gene structure prediction programs
6. A model of evolutionary change in proteins
7. Transterm, the translational signal database, extended to include full coding sequence and untranslated regions
8. Gene recognition via spliced sequence alignment
9. Long human-mouse sequence alignments reveal novel regulatory elements: A reason to sequence the mouse genome
10. Comparative sequence of human and mouse BAC clones from the mnd2 region of chromosome 2p13
11. Striking sequence similarity over almost 100 kilobases of human and mouse T-cell receptor DNA
12. Genomic Sequence Comparison of the Human and Mouse XRCC1 DNA Repair Gene Regions
13. The human galactose-1 phosphate uridyltransferase gene
14. Synonymous and Nonsynonymous Substitution Distances are Correlated in Mouse and Rat Genes
15. Comparative analysis of 1196 orthologous mouse and human full-length mRNA and protein sequences
16. Evolutionary parameters of the transcribed mammalian genome: An analysis of 2,820 orthologous rodent and human sequences
17. The chromosomal gene structure and the mRNAs for human granulocyte colony-stimulating factor
18. A general method applicable to the search for similarities in the amino acid sequences of two proteins
19. Large scale comparative sequence analysis of the human and murine bruton's tyrosine kinase loci reveals conserved regulatory domains
20. A dictionary based approach for gene annotation
21. Identification of common molecular subsequences