Evolutionary strategies of human pathogens

Cold Spring Harbor Symposia on Quantitative Biology

Volumn 68, Issue , 2003, Pages 151-158

  Parkhill, J ^a   Thomson, N ^a  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; CONFERENCE PAPER; EVOLUTIONARY ADAPTATION; GENE INACTIVATION; GENE INSERTION; GENE LOSS; GENE REARRANGEMENT; HUMAN; PATHOGENESIS; PATHOGENICITY; PRIORITY JOURNAL; PSEUDOGENE; SEROTYPE; YERSINIA PESTIS; ARTICLE; BACTERIAL GENE; BACTERIAL VIRULENCE; BORDETELLA PERTUSSIS; ENTEROBACTERIACEAE; EUKARYOTE EVOLUTION; NUCLEOTIDE REPEAT; PATHOGENICITY ISLAND; PERTUSSIS; PLAGUE; SALMONELLA ENTERICA SEROVAR TYPHI; TYPHOID FEVER; YERSINIA;

INSERTION SEQUENCES; YERSINIA; YERSINIA PESTIS;

DNA;

EID: 3242690484     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.2003.68.151     Document Type: Conference Paper

References (51)

1. Achtman M., Zurth K., Morelli G., Torrea G., Guiyoule A., and Carniel E. 1999. Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis. Proc. Natl. Acad. Sci. 96: 14043.
2. Andersson D.I. and Hughes D. 1996. Muller's ratchet decreases fitness of a DNA-based microbe. Proc. Natl. Acad. Sci. 93: 906.
3. Bach S., de Almeida A., and Carniel E. 2000. The Yersinia high-pathogenicity island is present in different members of the family Enterobacteriaceae. FEMS Microbiol. Lett. 183: 289.
4. Bakshi C.S., Singh V.P., Wood M.W., Jones P.W., Wallis T.S., and Galyov E.E. 2000. Identification of SopE2, a Salmonella secreted protein which is highly homologous to SopE and involved in bacterial invasion of epithelial cells. J. Bacteriol. 182: 2341.
5. Blackburn M., Golubeva E., Bowen D., and French-Constant R.H. 1998. A novel insecticidal toxin from Photorhabdus luminescens, toxin complex A (Tca), and its histopathological effects on the midgut of Manduca sexta. Appl. Environ. Microbiol. 64: 3036.
6. Blattner F.R., Plunkett G., Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D. Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., and Shao Y. 1997. The complete genome sequence of Escherichia coli K-12. Science 277: 1453.
7. Blum G., Ott M., Lischewski A., Ritter A., Imrich H., Tschape H., and Hacker J. 1994. Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen. Infect. Immun. 62: 606.
8. Buchrieser C., Prentice M., and Carniel E. 1998. The 102-kilobase unstable region of Yersinia pestis comprises a high-pathogenicity island linked to a pigmentation segment which undergoes internal rearrangement. J. Bacteriol. 180: 2321.
9. Cole S.T., Eiglmeier K., Parkhill J., James K.D., Thomson N.R., Wheeler P.R., Honore N., Garnier T., Churcher C., Harris D., Mungall K., Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K., Duthoy S., Feltwell T., Fraser A., Hamlin N., Holroyd S., Hornsby T., Jagels K., and Lacroix C., et al. 2001. Massive gene decay in the leprosy bacillus. Nature 409: 1007.
10. Cowan C., Jones H.A., Kaya Y.H., Perry R.D., and Straley S.C. 2000. Invasion of epithelial cells by Yersinia pestis: Evidence for a Y. pestis-specific invasin. Infect. Immun. 68: 4523.
11. Darwin A.J. and Miller V.L. 1999. Identification of Yersinia enterocolitica genes affecting survival in an animal host using signature-tagged transposon mutagenesis. Mol. Microbiol. 32: 51.
12. Deng W., Burland V., Plunkett G., III, Boutin A., Mayhew G.F., Liss P., Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D., Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A., Nilles M.L., Matson J.S., Blattner F.R., and Perry R.D. 2002. Genome sequence of Yersinia pestis KIM. J. Bacteriol. 184: 4601.
13. Dillard J.P. and Yother J. 1994. Genetic and molecular characterization of capsular polysaccharide biosynthesis in Streptococcuspneumoniae type 3. Mol. Microbiol. 12: 959.
14. Dillard J.P., Caimano M., Kelly T., and Yother J. 1995. Capsules and cassettes: Genetic organization of the capsule locus of Streptococcus pneumoniae. Dev. Biol. Stand. 85: 261.
15. El Tahir Y. and Skurnik M. 2001. YadA, the multifaceted Yersinia adhesin. Int. J. Med. Microbiol. 291: 209.
16. Galan J.E. 1996. Molecular genetic bases of Salmonella entry into host cells. Mol. Microbiol. 20: 263.
17. Hacker J., Blum-Oehler G., Muhldorfer I., and Tschape H. 1997. Pathogenicity islands of virulent bacteria: Structure, function and impact on microbial evolution. Mol. Microbiol. 23: 1089.
18. Hare J.M., Wagner A.K., and McDonough K.A. 1999. Independent acquisition and insertion into different chromosomal locations of the same pathogenicity island in Yersinia pestis and Yersinia pseudotuberculosis. Mol. Microbiol. 31: 291.
19. Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K., Han C.G., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T., Iida T., Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T., Kuhara S., Shiba T., Hattori M., and Shinagawa H. 2001. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. DNA Res. 8: 11.
20. Kingsley R.A. and Baumler A.J. 2000. Host adaptation and the emergence of infectious disease: The Salmonella paradigm. Mol. Microbiol. 36: 1006.
21. -. 2002. Pathogenicity islands and host adaptation of Salmonella serovars. Curr. Top. Microbiol. Immunol. 264: 67.
22. McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E., Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R., and Wilson R.K. 2001. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413: 852.
23. McDonough K.A. and Hare J.M. 1997. Homology with a repeated Yersinia pestis DNA sequence IS100 correlates with pesticin sensitivity in Yersinia pseudotuberculosis. J. Bacteriol. 179: 2081.
24. Miao E.A. and Miller S.I. 2000. A conserved amino acid sequence directing intracellular type III secretion by Salmonella typhimurium. Proc. Natl. Acad. Sci. 97: 7539.
25. Mills D.M., Bajaj V., and Lee C.A. 1995. A 40 kb chromosomal fragment encoding Salmonella typhimurium invasion genes is absent from the corresponding region of the Escherichia coli K-12 chromosome. Mol. Microbiol. 15: 749.
26. Neidhardt F.C. and Curtiss R., Eds. 1996. Escherichia coli and Salmonella: Cellular and molecular biology. ASM Press, Washington, D.C.
27. Nesper J., Lauriano C.M., Klose K.E., Kapfhammer D., Kraiss A., and Reidl J. 2001. Characterization of Vibrio cholerae O1 El tor galU and galE mutants: Influence on lipopolysaccharide structure, colonization, and biofilm formation. Infect. Immun. 69: 435.
28. Ochman H., Soncini F.C., Solomon F., and Groisman E.A. 1996. Identification of a pathogenicity island required for Salmonella survival in host cells. Proc. Natl. Acad. Sci. 93: 7800.
29. Odaert M., Berche P., and Simonet M. 1996. Molecular typing of Yersinia pseudotuberculosis by using an IS200-like element. J. Clin. Microbiol. 34: 2231.
30. Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J., Churcher C., Mungall K.L., Bentley S.D., Holden M.T., Sebaihia M., Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A., Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T., Hamlin N., and Haque A., et al. 2001a. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature 413: 848.
31. Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T., Prentice M.B., Sebaihia M., James K.D., Churcher C., Mungall K.L., Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.M., Chillingworth T., Cronin A., Davies R.M., Davis P., Dougan G., Feltwell T., Hamlin N., Holroyd S., Jagels K., and Karlyshev A.N., et al. 2001b. Genome sequence of Yersinia pestis, the causative agent of plague. Nature 413: 523.
32. Pepe J.C. and Miller V.L. 1993. Yersinia enterocolitica invasin: A primary role in the initiation of infection. Proc. Natl. Acad. Sci. 90: 6473.
33. Perna N.T., Plunkett G., III, Burland V., Mau B., Glasner J.D., Rose D.J., Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A., Posfai G., Hackett J., Klink S., Boutin A., Shao Y., Miller L., Grotbeck E.J., Davis N.W., Lim A., Dimalanta E.T., Potamousis K.D., Apodaca J., Anantharaman T.S., Lin J., and Yen G., et al. 2001. Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 409: 529.
34. Perry R.D. and Fetherston J.D. 1997. Yersinia pestis-Etiologic agent of plague. Clin. Microbiol. Rev. 10: 35.
35. Rakin A., Noelting C., Schropp P., and Heesemann J. 2001. Integrative module of the high-pathogenicity island of Yersinia. Mol. Microbiol. 39: 407.
36. Reeves M.W., Evins G.M., Heiba A.A., Plikaytis B.D., and Farmer J.J., III. 1989. Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis, and proposal of Salmonella bongori comb. nov. J. Clin. Microbiol. 27: 313.
37. Reiter W.D., Palm P., and Yeats S. 1989. Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements. Nucleic Acids Res. 17: 1907.
38. Rosqvist R., Skurnik M., and Wolf-Watz H. 1988. Increased virulence of Yersinia pseudotuberculosis by two independent mutations. Nature 334: 522.
39. Schubert S., Cuenca S., Fischer D., and Heesemann J. 2000. High-pathogenicity island of Yersinia pestis in enterobacteriaceae isolated from blood cultures and urine samples: Prevalence and functional expression. J. Infect. Dis. 182: 1268.
40. Shea J.E., Hensel M., Gleeson C., and Holden D.W. 1996. Identification of a virulence locus encoding a second type III secretion system in Salmonella typhimurium. Proc. Natl. Acad. Sci. 93: 2593.
41. Skurnik M., Peippo A., and Ervela E. 2000. Characterization of the O-antigen gene clusters of Yersinia pseudotuberculosis and the cryptic O-antigen gene cluster of Yersinia pestis shows that the plague bacillus is most closely related to and has evolved from Y. pseudotuberculosis serotype O:1b. Mol. Microbiol. 37: 316.
42. Swartley J.S., Marfin A.A., Edupuganti S., Liu L.J., Cieslak P., Perkins B., Wenger J.D., and Stephens D.S. 1997. Capsule switching of Neisseria meningitidis. Proc. Natl. Acad. Sci. 94: 271.
43. Townsend S.M., Kramer N.E., Edwards R., Baker S., Hamlin N., Simmonds M., Stevens K., Maloy S., Parkhill J., Dougan G., and Baumler A.J. 2001. Salmonella enterica serovar Typhi possesses a unique repertoire of fimbrial gene sequences. Infect. Immun. 69: 2894.
44. Tsolis R.M., Townsend S.M., Miao E.A., Miller S.I., Ficht T.A., Adams L.G., and Baumler A.J. 1999. Identification of a putative Salmonella enterica serotype typhimurium host range factor with homology to lpaH and YopM by signature-tagged mutagenesis. Infect. Immun. 67: 6385.
45. Wang P. and Granados R.R. 1997. An intestinal mucin is the target substrate for a baculovirus enhancin. Proc. Natl. Acad. Sci. 94: 6977-6982.
46. Waterfield N.R., Bowen D.J., Fetherston J.D., Perry R.D., and French-Constant R.H. 2001. The tc genes of Photorhabdus: A growing family. Trends Microbiol. 9: 185.
47. Wood M.W., Jones M.A., Watson P.R., Siber A.M., McCormick B.A., Hedges S., Rosqvist R., Wallis T.S., and Galyov E.E. 2000. The secreted effector protein of Salmonella dublin, SopA, is translocated into eukaryotic cells and influences the induction of enteritis. Cell. Microbiol. 2: 293.
48. Young G.M., Badger J.L., and Miller V.L. 2000. Motility is required to initiate host cell invasion by Yersinia enterocolitica. Infect. Immun. 68: 4323.
49. Zhang S., Santos R.L., Tsolis R.M., Stender S., Hardt W.D., Baumler A.J., and Adams L.G. 2002. The Salmonella enterica serotype typhimurium effector proteins SipA, SopA, SopB, SopD, and SopE2 act in concert to induce diarrhea in calves. Infect. Immun. 70: 3843.
50. Zhang X.L., Morris C., and Hackett J. 1997. Molecular cloning, nucleotide sequence, and function of a site-specific recombinase encoded in the major 'pathogenicity island' of Salmonella typhi. Gene 202: 139.
51. Zhang X.L., Tsui I.S., Yip C.M., Fung A.W., Wong D.K., Dai X., Yang Y., Hackett J., and Morris C. 2000. Salmonella enterica serovar typhi uses type IVB pili to enter human intestinal epithelial cells. Infect. Immun. 68: 3067.