메뉴 건너뛰기




Volumn 132, Issue 1-2, 2006, Pages 104-112

Absolute quantitation of RNA by a competitive real-time RT-PCR method using piscine nodavirus as a model

Author keywords

Piscine nodavirus; Quantitative real time RT PCR; Recombinant RNA competitor; Teleost; Viral RNA quantitation

Indexed keywords

DYE; PRIMER RNA; RNA;

EID: 32344432457     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2005.08.022     Document Type: Article
Times cited : (31)

References (27)
  • 1
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • C.L. Andersens, J.L. Jensen, and T.F. Ørntoft Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets Cancer Res. 64 2004 5245 5250
    • (2004) Cancer Res. , vol.64 , pp. 5245-5250
    • Andersens, C.L.1    Jensen, J.L.2    Ørntoft, T.F.3
  • 2
    • 0036668567 scopus 로고    scopus 로고
    • Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): Trends and problems
    • S.A. Bustin Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems J. Mol. Endocrinol. 29 2002 23 39
    • (2002) J. Mol. Endocrinol. , vol.29 , pp. 23-39
    • Bustin, S.A.1
  • 4
    • 0034700435 scopus 로고    scopus 로고
    • Isolation in cell culture of nodavirus from farmed Atlantic halibut Hippoglossus hippoglossus in Norway
    • B.H. Dannevig, R. Nilsen, I. Modahl, M. Jankowska, T. Taksdal, and C.M. Press Isolation in cell culture of nodavirus from farmed Atlantic halibut Hippoglossus hippoglossus in Norway Dis. Aquat. Organ. 43 2000 183 189
    • (2000) Dis. Aquat. Organ. , vol.43 , pp. 183-189
    • Dannevig, B.H.1    Nilsen, R.2    Modahl, I.3    Jankowska, M.4    Taksdal, T.5    Press, C.M.6
  • 5
    • 3142615272 scopus 로고    scopus 로고
    • Validation of housekeeping genes for normalizing RNA expression in real-time PCR
    • K. Dheda, J.F. Huggett, S.A. Bustin, M.A. Johnson, G. Rook, and A. Zumla Validation of housekeeping genes for normalizing RNA expression in real-time PCR Biotechniques 37 2004 112 119
    • (2004) Biotechniques , vol.37 , pp. 112-119
    • Dheda, K.1    Huggett, J.F.2    Bustin, S.A.3    Johnson, M.A.4    Rook, G.5    Zumla, A.6
  • 6
    • 0029840128 scopus 로고    scopus 로고
    • Cell culture isolation of piscine neuropathy nodavirus from juvenile sea bass, Dicentrarchus labrax
    • G.N. Frerichs, H.D. Rodger, and Z. Peric Cell culture isolation of piscine neuropathy nodavirus from juvenile sea bass, Dicentrarchus labrax J. Gen. Virol. 77 2004 2067 2071
    • (2004) J. Gen. Virol. , vol.77 , pp. 2067-2071
    • Frerichs, G.N.1    Rodger, H.D.2    Peric, Z.3
  • 7
    • 0025355882 scopus 로고
    • Analysis of cytokine messenger-RNA and DNA - Detection and quantitation by competitive polymerase chain-reaction
    • G. Gilliland, S. Perrin, K. Blanchard, and H.F. Bunn Analysis of cytokine messenger-RNA and DNA - detection and quantitation by competitive polymerase chain-reaction Proc. Natl. Acad. Sci. U.S.A. 87 1990 2725 2729
    • (1990) Proc. Natl. Acad. Sci. U.S.A. , vol.87 , pp. 2725-2729
    • Gilliland, G.1    Perrin, S.2    Blanchard, K.3    Bunn, H.F.4
  • 8
    • 0034645681 scopus 로고    scopus 로고
    • Characterization of the capsid protein gene from a nodavirus strain affecting the Atlantic halibut Hippoglossus hippoglossus and design of an optimal reverse-transcriptase polymerase chain reaction (RT-PCR) detection assay
    • S. Grotmol, A.H. Nerland, E. Biering, G.K. Totland, and T. Nishizawa Characterization of the capsid protein gene from a nodavirus strain affecting the Atlantic halibut Hippoglossus hippoglossus and design of an optimal reverse-transcriptase polymerase chain reaction (RT-PCR) detection assay Dis. Aquat. Organ. 39 2000 79 88
    • (2000) Dis. Aquat. Organ. , vol.39 , pp. 79-88
    • Grotmol, S.1    Nerland, A.H.2    Biering, E.3    Totland, G.K.4    Nishizawa, T.5
  • 9
    • 2942720757 scopus 로고    scopus 로고
    • A sequential study of pathological findings in Atlantic halibut, Hippoglossus hippoglossus (L.), throughout one year after an acute outbreak of viral encephalopathy and retinopathy
    • R. Johansen, S. Grove, A.K. Svendsen, I. Modahl, and B. Dannevig A sequential study of pathological findings in Atlantic halibut, Hippoglossus hippoglossus (L.), throughout one year after an acute outbreak of viral encephalopathy and retinopathy J. Fish. Dis. 27 2004 327 341
    • (2004) J. Fish. Dis. , vol.27 , pp. 327-341
    • Johansen, R.1    Grove, S.2    Svendsen, A.K.3    Modahl, I.4    Dannevig, B.5
  • 10
    • 0032067569 scopus 로고    scopus 로고
    • Protective immunity to VHS in rainbow trout (Oncorhynchus mykiss Walbaum) following DNA vaccination
    • N. Lorenzen, E. Lorenzen, K. Einer Jensen, J. Heppell, T. Wu, and H. Davis Protective immunity to VHS in rainbow trout (Oncorhynchus mykiss Walbaum) following DNA vaccination Fish Shellfish Immunol. 8 1998 261 270
    • (1998) Fish Shellfish Immunol. , vol.8 , pp. 261-270
    • Lorenzen, N.1    Lorenzen, E.2    Einer Jensen, K.3    Heppell, J.4    Wu, T.5    Davis, H.6
  • 12
    • 0030828475 scopus 로고    scopus 로고
    • Genomic characterization of the virus causing infectious salmon anemia in Atlantic salmon (Salmo salar L.): An orthomyxo-like virus in a teleost
    • S. Mjaaland, E. Rimstad, K. Falk, and B.H. Dannevig Genomic characterization of the virus causing infectious salmon anemia in Atlantic salmon (Salmo salar L.): an orthomyxo-like virus in a teleost J. Virol. 71 1997 7681 7686
    • (1997) J. Virol. , vol.71 , pp. 7681-7686
    • Mjaaland, S.1    Rimstad, E.2    Falk, K.3    Dannevig, B.H.4
  • 13
    • 0026518969 scopus 로고
    • Properties of a new virus belonging to nodaviridae found in larval striped jack (Pseudocaranx dentex) with nervous necrosis
    • K.I. Mori, T. Nakai, K. Muroga, M. Arimoto, K. Mushiake, and I. Furusawa Properties of a new virus belonging to nodaviridae found in larval striped jack (Pseudocaranx dentex) with nervous necrosis Virology 187 1992 368 371
    • (1992) Virology , vol.187 , pp. 368-371
    • Mori, K.I.1    Nakai, T.2    Muroga, K.3    Arimoto, M.4    Mushiake, K.5    Furusawa, I.6
  • 14
    • 0036208869 scopus 로고    scopus 로고
    • Betanodavirus infections of teleost fish: A review
    • B.L. Munday, J. Kwang, and N. Moody Betanodavirus infections of teleost fish: a review J. Fish. Dis. 25 2002 127 142
    • (2002) J. Fish. Dis. , vol.25 , pp. 127-142
    • Munday, B.L.1    Kwang, J.2    Moody, N.3
  • 15
    • 0032743238 scopus 로고    scopus 로고
    • Sequence of the non-structural protein gene encoded by RNA1 of striped jack nervous necrosis virus
    • T. Nagai, and T. Nishizawa Sequence of the non-structural protein gene encoded by RNA1 of striped jack nervous necrosis virus J. Gen. Virol. 80 1999 3019 3022
    • (1999) J. Gen. Virol. , vol.80 , pp. 3019-3022
    • Nagai, T.1    Nishizawa, T.2
  • 16
    • 0032431226 scopus 로고    scopus 로고
    • Quantification of insulin-like growth factor-1 (IGF-1) mRNA: Development and validation of an internally standardised competitive reverse transcription-polymerase chain reaction
    • M. Pfaffl, H.H.D. Meyer, and H. Sauerwein Quantification of insulin-like growth factor-1 (IGF-1) mRNA: Development and validation of an internally standardised competitive reverse transcription-polymerase chain reaction Exp. Clin. Endocrinol. Diabetes 106 1998 506 513
    • (1998) Exp. Clin. Endocrinol. Diabetes , vol.106 , pp. 506-513
    • Pfaffl, M.1    Meyer, H.H.D.2    Sauerwein, H.3
  • 17
    • 25444494901 scopus 로고    scopus 로고
    • Quantification strategies in real-time PCR
    • S.A. Bustin International University Line La Jolla
    • M.W. Pfaffl Quantification strategies in real-time PCR S.A. Bustin A-Z of Quantitative PCR 2004 International University Line La Jolla 87 120
    • (2004) A-Z of Quantitative PCR , pp. 87-120
    • Pfaffl, M.W.1
  • 20
    • 3242784271 scopus 로고    scopus 로고
    • Detection and quantification of gene expression in environmental bacteriology
    • F.H. Sharkey, I.M. Banat, and R. Marchant Detection and quantification of gene expression in environmental bacteriology Appl. Environ. Microbiol. 70 2004 3795 3806
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 3795-3806
    • Sharkey, F.H.1    Banat, I.M.2    Marchant, R.3
  • 21
  • 22
    • 3042571898 scopus 로고    scopus 로고
    • Complete sequence of RNA1 and subgenomic RNA3 of Atlantic halibut nodavirus (AHNV)
    • I. Sommerset, and A.H. Nerland Complete sequence of RNA1 and subgenomic RNA3 of Atlantic halibut nodavirus (AHNV) Dis. Aquat. Organ. 58 2004 117 125
    • (2004) Dis. Aquat. Organ. , vol.58 , pp. 117-125
    • Sommerset, I.1    Nerland, A.H.2
  • 23
    • 0037109753 scopus 로고    scopus 로고
    • Quantitative real-time reverse transcription polymerase chain reaction: Normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies
    • C. Tricarico, P. Pinzani, S. Bianchi, M. Paglierani, V. Distante, M. Pazzagli, S.A. Bustin, and C. Orlando Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies Anal. Biochem. 309 2002 293 300
    • (2002) Anal. Biochem. , vol.309 , pp. 293-300
    • Tricarico, C.1    Pinzani, P.2    Bianchi, S.3    Paglierani, M.4    Distante, V.5    Pazzagli, M.6    Bustin, S.A.7    Orlando, C.8
  • 25
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • J. Vandesompele, K. de Preter, F. Pattyn, B. Poppe, N. van Roy, A. de Paepe, and F. Speleman Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes Genome Biol. 3 2002 0034.1 0034.12
    • (2002) Genome Biol. , vol.3 , pp. 00341-003412
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 26
    • 0036720986 scopus 로고    scopus 로고
    • Flow cytometric quantification of competitive reverse transcription-PCR products
    • N. Wedemeyer, T. Potter, S. Wetzlich, and W. Gohde Flow cytometric quantification of competitive reverse transcription-PCR products Clin. Chem. 48 2002 1398 1405
    • (2002) Clin. Chem. , vol.48 , pp. 1398-1405
    • Wedemeyer, N.1    Potter, T.2    Wetzlich, S.3    Gohde, W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.