Variants of the 5′-untranslated region of human NCF2: Expression and translational efficiency

Gene

Volumn 366, Issue 1, 2006, Pages 169-179

  Gauss, Katherine A ^a   Bunger, Peggy L ^a   Crawford, Matthew A ^a   McDermott, Breanne E ^a   Swearingen, Robin ^a   Nelson Overton, Laura K ^a   Siemsen, Daniel W ^a   Kobayashi, Scott D ^b   DeLeo, Frank R ^b   Quinn, Mark T ^a  

^a MONTANA STATE UNIVERSITY   (United States)

^b NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

Alternative splicing; Gene expression regulation; NADPH oxidase; Phagocytes; Promoter; Superoxide anion

Indexed keywords

LUCIFERASE; MESSENGER RNA; PROTEIN NCF2; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE OXIDASE; UNCLASSIFIED DRUG; NEUTROPHIL CYTOSOL FACTOR 67K; PHOSPHOPROTEIN;

5' UNTRANSLATED REGION; ARTICLE; ASSAY; CELL LINE; CELL STRAIN HL 60; CELL STRAIN U937; CHRONIC GRANULOMATOUS DISEASE; CONTROLLED STUDY; EXON; GENE EXPRESSION; GENETIC STABILITY; GENETIC TRANSCRIPTION; GENETIC TRANSFECTION; GENETIC VARIABILITY; HUMAN; HUMAN CELL; HUMAN TISSUE; IN VITRO STUDY; IN VIVO STUDY; INTRON; MOLECULAR CLONING; NEUTROPHIL; NONHUMAN; NUCLEOTIDE SEQUENCE; PHAGOCYTOSIS; PRIORITY JOURNAL; REPORTER GENE; RNA TRANSLATION; TISSUE SPECIFICITY; X CHROMOSOME LINKED DISORDER; ALTERNATIVE RNA SPLICING; ANTIBODY SPECIFICITY; BIOSYNTHESIS; CYTOLOGY; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MONOCYTE; PHYSIOLOGY; PROTEIN SYNTHESIS; RNA STABILITY;

5' UNTRANSLATED REGIONS; ALTERNATIVE SPLICING; EXONS; GENE EXPRESSION REGULATION; GRANULOMATOUS DISEASE, CHRONIC; HL-60 CELLS; HUMANS; INTRONS; MONOCYTES; NEUTROPHILS; ORGAN SPECIFICITY; PHAGOCYTOSIS; PHOSPHOPROTEINS; PROTEIN BIOSYNTHESIS; RNA STABILITY; U937 CELLS;

EID: 32044440333     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2005.09.012     Document Type: Article

References (41)

1. B.M. Babior NADPH oxidase Curr. Opin. Immunol. 16 2004 42 47
2. I. Bar, F. Tissir, R.C. De Lambert, B.O. De, and A.M. Goffinet The gene encoding disabled-1 (DAB1), the intracellular adaptor of the Reelin pathway, reveals unusual complexity in human and mouse J. Biol. Chem. 278 2003 5802 5812
3. phox in aortas from angiotensin II-infused mice Am. J. Physiol, Heart Circ. Physiol 279 2000 H2234 H2240
4. F.R. De Leo, M.A. Jutila, and M.T. Quinn Characterization of peptide diffusion into electropermeabilized neutrophils J. Immunol. Methods 198 1996 35 49
5. C.H. de Moor, and J.D. Richter Translational control in vertebrate development Int. Rev. Cyt. 203 2001 567 608
6. phox expression J. Immunol. 163 1999 6095 6105
7. phox in vitro J. Biol. Chem. 271 1996 22578 22582
8. phox promoter activity J. Leukoc. Biol. 71 2002 163 172
9. M. Geiszt, and T.L. Leto The Nox family of NAD(P)H oxidases: host defense and beyond J. Biol. Chem. 279 2004 51715 51718
10. G.M. Graziani-Bowering, J. Graham, and L.G. Filion A quick, easy, and inexpensive method for the isolation of human peripheral blood monocytes J. Immunol. Methods 207 1997 157 168
11. K. Grobe, and J.D. Esko Regulated translation of heparan sulfate N-acetylglucosamine N-deacetylase/n-sulfotransferase isozymes by structured 5′-untranslated regions and internal ribosome entry sites J. Biol. Chem. 277 2002 30699 30706
12. J. Hua, T. Hasebe, A. Someya, S. Nakamura, K. Sugimoto, and I. Nagaoka Evaluation of the expression of NADPH oxidase components during maturation of HL-60 cells to neutrophil lineage J. Leukoc. Biol. 68 2000 216 224
13. C. Jarstrand, and B. Akerlund Oxygen radical release by neutrophils of HIV-infected patients Chem. Biol. Interact. 91 1994 141 146
14. phox gene: genomic organization and restriction fragment length polymorphism analysis for prenatal diagnosis in chronic granulomatous disease Blood 82 1993 3739 3744
15. S.D. Kobayashi, J.M. Voyich, C.L. Buhl, R.M. Stahl, and F.R. DeLeo Global changes in gene expression by human polymorphonuclear leukocytes during receptor-mediated phagocytosis: cell fate is regulated at the level of gene expression Proc. Natl. Acad. Sci. U. S. A. 99 2002 6901 6906
16. S.D. Kobayashi Bacterial pathogens modulate an apoptosis differentiation program in human neutrophils Proc. Natl. Acad. Sci. U. S. A. 100 2003 10948 10953
17. phox is not a sine qua non participant in the activation of NADPH oxidase but is required for optimal superoxide production J. Biol. Chem. 271 1996 30326 30329
18. M. Kozak Circumstances and mechanisms of inhibition of translation by secondary structure in eucaryotic mRNAs Mol. Cell. Biol. 9 1989 5134 5142
19. M. Kozak An analysis of vertebrate mRNA sequences: intimations of translational control J. Cell Biol. 115 1991 887 903
20. S. Kuersten, and E.B. Goodwin The power of the 3' UTR: translational control and development Nat. Rev., Genet. 4 2003 626 637
21. J.D. Lambeth NOX enzymes and the biology of reactive oxygen Nat. Rev. Immunol. 4 2004 181 189
22. J.E. Landers, S.L. Cassel, and D.L. George Translational enhancement of mdm2 oncogene expression in human tumor cells containing a stabilized wild-type p53 protein Cancer Res. 57 1997 3562 3568
23. T.L. Leto Cloning of a 67-kD neutrophil oxidase factor with similarity to a noncatalytic region of p60-src Science 248 1990 727 730
24. H.A. Meijer, and A.A. Thomas Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA Biochem. J. 367 2002 1 11
25. D. Miyamoto, A. Someya, H. Nunoi, I. Nagaoka, and T. Yamashita Analysis of the NADPH oxidase components during differentiation of HL-60 cells to eosinophilic lineage Biochim. Biophys. Acta, Mol. Cell Res. 1224 1994 11 16
26. W.M. Nauseef Assembly of the phagocyte NADPH oxidase Histochem. Cell Biol. 122 2004 277 291
27. K.M. Noh, and J.Y. Koh Induction and activation by zinc of NADPH oxidase in cultured cortical neurons and astrocytes J. Neurosci. 20 2000 NIL1 NIL5
28. M.H. Paclet, A.W. Coleman, S. Vergnaud, and F. Morel p67-phox-mediated NADPH oxidase assembly: imaging of cytochrome b558 liposomes by atomic force microscopy Biochemistry 39 2000 9302 9310
29. phox mRNA expression and NADPH oxidase superoxide generation in rabbit aortic adventitial fibroblasts Hypertension 32 1998 331 337
30. G. Pesole, F. Mignone, C. Gissi, G. Grillo, F. Licciulli, and S. Liuni Structural and functional features of eukaryotic mRNA untranslated regions Gene 276 2001 73 81
31. M.T. Quinn, and K.A. Gauss Structure and regulation of the neutrophil respiratory burst oxidase: comparison with non-phagocyte oxidases J. Leukoc. Biol. 76 2004 760 781
32. D. Ruggero, and P.P. Pandolfi Does the ribosome translate cancer? Nat. Rev., Cancer 3 2003 179 192
33. K. Sobczak, and W.J. Krzyzosiak Structural determinants of BRCA1 translational regulation J. Biol. Chem. 277 2002 17349 17358
34. M. Stoneley, and A.E. Willis Aberrant regulation of translation initiation in tumorigenesis Curr. Mol. Med. 3 2003 597 603
35. phox- containing neutrophil-type NAD(P)H oxidase in smooth muscle cells from human resistance arteries. Regulation by angiotensin II Circ. Res. 90 2002 1205 1213
36. - in polymorphonuclear leukocytes using the tetrazolium method: comparison of various tetrazolium salts Acta Histochem. Cytochem. 32 1999 351 357
37. D.J. Uhlinger, K.L. Taylor, and J.D. Lambeth p67-phox enhances the binding of p47-phox to the human neutrophil respiratory burst oxidase complex J. Biol. Chem. 269 1994 22095 22098
38. S. Vergnaud, M.H. Paclet, J. El Benna, M.A. Pocidalo, and F. Morel Complementation of NADPH oxidase in p67-phox-deficient CGD patients- p67-phox/p40-phox interaction Eur. J. Biochem. 267 2000 1059 1067
39. B.D. Volpp, W.M. Nauseef, and R.A. Clark Two cytosolic neutrophil oxidase components absent in autosomal chronic granulomatous disease Science 242 1988 1295 1297
40. C.C. Winterbourn Biological reactivity and biomarkers of the neutrophil oxidant, hypochlorous acid Toxicology 181 2002 223 227
41. M. Zuker Mfold web server for nucleic acid folding and hybridization prediction Nucleic Acids Res. 31 2003 3406 3415