Biochemical characterization of androgen receptor-interacting protein 4

Biochemical Journal

Volumn 393, Issue 3, 2006, Pages 789-795

  Domanskyi, Andrii ^a   Virtanen, Katja T ^a   Palvimo, Jorma J ^a,b   Jänne, Olli A ^a,c  

^a UNIVERSITY OF HELSINKI   (Finland)

^b UNIVERSITY OF EASTERN FINLAND   (Finland)

^c BIOMEDICUM HELSINKI   (Finland)

Author keywords

Androgen receptor; Androgen receptor interacting protein 4 (ARIP4); ATPase; Chromatin remodelling; Co regulator; Sumoylation

Indexed keywords

ADENOSINETRIPHOSPHATE; APPROXIMATION THEORY; COMPUTER SIMULATION; DNA; HYDROLYSIS; MUTAGENESIS; PARAMETER ESTIMATION;

ANDROGEN RECEPTOR; ANDROGEN-RECEPTOR-INTERACTING PROTEIN 4 (ARIP4); ATPASE; CHROMATIN REMODELING; CO-REGULATOR; SUMOYLATION;

PROTEINS;

ADENOSINE TRIPHOSPHATASE; ADENOSINE TRIPHOSPHATE; ANDROGEN RECEPTOR; ANDROGEN RECEPTOR INTERACTING PROTEIN 4; DOUBLE STRANDED DNA; PROTEIN; PROTEIN BRG 1; PROTEIN SNF2H; SUMO 1 PROTEIN; UNCLASSIFIED DRUG;

ALPHA THALASSEMIA; AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; CHEMICAL REACTION KINETICS; CHROMATIN ASSEMBLY AND DISASSEMBLY; COMPLEX FORMATION; CONTROLLED STUDY; HYDROLYSIS; IN VITRO STUDY; IN VIVO STUDY; MENTAL DEFICIENCY; MOUSE; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION; SEQUENCE HOMOLOGY; X CHROMOSOME LINKED DISORDER;

ADENOSINE TRIPHOSPHATASES; ANIMALS; CERCOPITHECUS AETHIOPS; COS CELLS; HELA CELLS; HUMANS; MICE; MUTATION; NUCLEOSOMES; PROTEIN BINDING; RECEPTORS, ANDROGEN; SUMO-1 PROTEIN; TRANS-ACTIVATION (GENETICS);

ANIMALIA;

EID: 31544475671     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/BJ20050823     Document Type: Article

References (45)

1. Rouleau, N., Domans'kyi, A., Reeben, M., Moilanen, A. M., Havas, K., Kang, Z., Owen-Hughes, T., Palvimo, J. J. and Jänne, O. A. (2002) Novel ATPase of SNF2-like protein family interacts with androgen receptor and modulates androgen-dependent transcription. Mol. Biol. Cell 13, 2106-2119
2. Linder, B., Cabot, R. A., Schwickert, T. and Rupp, R. A. (2004) The SNF2 domain protein family in higher vertebrates displays dynamic expression patterns in Xenopus laevis embryos. Gene 326, 59-66
3. Lusser, A. and Kadonaga, J. T. (2003) Chromatin remodeling by ATP-dependent molecular machines. BioEssays 25, 1192-1200
4. Lemon, B. D. and Freedman, L. P. (1999) Nuclear receptor cofactors as chromatin remodelers. Curr. Opin. Genet. Dev. 9, 499-504
5. Belandia, B. and Parker, M. G. (2003) Nuclear receptors: a rendezvous for chromatin remodeling factors. Cell (Cambridge, Mass.) 114, 277-280
6. Boyer, L. A., Logie, C., Bonte, E., Becker, P. B., Wade, P. A., Wolffe, A. P., Wu, C., Imbalzano, A. N. and Peterson, C. L. (2000) Functional delineation of three groups of the ATP-dependent family of chromatin remodeling enzymes. J. Biol. Chem. 275, 18864-18870
7. Peterson, C. L. (2000) ATP-dependent chromatin remodeling: going mobile. FEBS Lett. 476, 68-72
8. Aalfs, J. D., Narlikar, G. J. and Kingston, R. E. (2001) Functional differences between the human ATP-dependent nucleosome remodeling proteins BRG1 and SNF2H. J. Biol. Chem. 276, 34270-34278
9. Fan, H. Y., He, X., Kingston, R. E. and Narlikar, G. J. (2003) Distinct strategies to make nucleosomal DNA accessible. Mol. Cell 11, 1311-1322
10. Langst, G. and Becker, P. B. (2004) Nucleosome remodeling: one mechanism, many phenomena? Biochim. Biophys. Acta 1677, 58-63
11. Gibbons, R. J., Picketts, D. J., Villard, L. and Higgs, D. R. (1995) Mutations in a putative global transcriptional regulator cause X-linked mental retardation with alpha-thalassemia (ATR-X syndrome). Cell (Cambridge, Mass.) 80, 837-845
12. Xue, Y., Gibbons, R., Yan, Z., Yang, D., McDowell, T. L., Sechi, S., Qin, J., Zhou, S., Higgs, D. and Wang, W. (2003) The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies. Proc. Natl. Acad. Sci. U.S.A. 100, 10635-10640
13. Tang, J., Wu, S., Liu, H., Stratt, R., Barak, O. G., Shiekhattar, R., Picketts, D. J. and Yang, X. (2004) A novel transcription regulatory complex containing death domain-associated protein and the ATR-X syndrome protein. J. Biol. Chem. 279, 20369-20377
14. Tang, P., Park, D. J., Marshall Graves, J. A. and Harley, V. R. (2004) ATRX and sex differentiation. Trends Endocrinol. Metab. 15, 339-344
15. Jänne, O. A., Moilanen, A., Poukka, H., Rouleau, N., Karvonen, U., Kotaja, N., Hakli, M. and Palvimo, J. J. (2000) Androgen-receptor-interacting nuclear proteins. Biochem. Soc. Trans. 28, 401-405
16. Lee, J. W., Lee, Y. C., Na, S. Y., Jung, D. J. and Lee, S. K. (2001) Transcriptional coregulators of the nuclear receptor superfamily: coactivators and corepressors. Cell. Mol. Life Sci. 58, 289-297
17. Lee, K. C. and Lee Kraus, W. (2001) Nuclear receptors, coactivators and chromatin: new approaches, new insights. Trends Endocrinol. Metab. 12, 191-197
18. Heinlein, C. A. and Chang, C. (2002) Androgen receptor (AR) coregulators: an overview. Endocr. Rev. 23, 175-200
19. Kang, Z., Jänne, O. A. and Palvimo, J. J. (2004) Coregulator recruitment and histone modifications in transcriptional regulation by the androgen receptor. Mol. Endocrinol. 18, 2633-2648
20. Xie, Y. B., Sui, Y. P., Shan, L. X., Palvimo, J. J., Phillips, D. M. and Jänne, O. A. (1992) Expression of androgen receptor in insect cells. Purification of the receptor and renaturation of its steroid- and DNA-binding functions. J. Biol. Chem. 267, 4939-4948
21. Pullman, M. E., Penefsky, H. S., Datta, A. and Racker, E. (1960) Partial resolution of the enzymes catalyzing oxidative phosphorylation. I. Purification and properties of soluble dinitrophenol-stimulated adenosine triphosphatase. J. Biol. Chem. 235, 3322-3329
22. Gonzalo, P., Sontag, B., Guillot, D. and Reboud, J. P. (1995) Fluorometric assay of GTPase activity: application to the couple elongation factor eEF-2-ribosome. Anal. Biochem. 225, 178-180
23. Poukka, H., Aarnisalo, P., Karvonen, U., Palvimo, J. J. and Jänne, O. A. (1999) Ubc9 interacts with the androgen receptor and activates receptor-dependent transcription. J. Biol. Chem. 274, 19441-19446
24. von Holt, C., Brandt, W. F., Greyling, H. J., Lindsey, G. G., Retief, J. D., Rodrigues, J. D., Schwager, S. and Sewell, B. T. (1989) Isolation and characterization of histones. Methods Enzymol. 170, 431-523
25. Stein, A. (1989) Reconstitution of chromatin from purified components. Methods Enzymol. 170, 585-603
26. Yager, T. D., McMurray, C. T. and van Holde, K. E. (1989) Salt-induced release of DNA from nucleosome core particles. Biochemistry 28, 2271-2281
27. Muller, S., Ledl, A. and Schmidt, D. (2004) SUMO: a regulator of gene expression and genome integrity. Oncogene 23, 1998-2008
28. Gill, G. (2004) SUMO and ubiquitin in the nucleus: different functions, similar mechanisms? Genes Dev. 18, 2046-2059
29. Boyer, L. A., Langer, M. R., Crowley, K. A., Tan, S., Denu, J. M. and Peterson, C. L. (2002) Essential role for the SANT domain in the functioning of multiple chromatin remodeling enzymes. Mol. Cell 10, 935-942
30. Grune, T., Brzeski, J., Eberharter, A., Clapier, C. R., Corona, D. F., Becker, P. B. and Muller, C. W. (2003) Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI. Mol. Cell 12, 449-460
31. Kasten, M., Szerlong, H., Erdjument-Bromage, H., Tempst, P., Werner, M. and Cairns, B. R. (2004) Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14. EMBO J. 23, 1348-1359
32. Polach, K. J. and Widom, J. (1999) Restriction enzymes as probes of nucleosome stability and dynamics. Methods Enzymol. 304, 278-298
33. Vignali, M., Hassan, A. H., Neely, K. E. and Workman, J. L. (2000) ATP-dependent chromatin-remodeling complexes. Mol. Cell. Biol. 20, 1899-1910
34. Smith, C. L., Horowitz-Scherer, R., Flanagan, J. F., Woodcock, C. L. and Peterson, C. L. (2003) Structural analysis of the yeast SWI/SNF chromatin remodeling complex. Nat. Struct. Biol. 10, 141-145
35. Asturias, F. J., Chung, W. H., Kornberg, R. D. and Lorch, Y. (2002) Structural analysis of the RSC chromatin-remodeling complex. Proc. Natl. Acad. Sci. U.S.A. 99, 13477-13480
36. Kotaja, N., Karvonen, U., Jänne, O. A. and Palvimo, J. J. (2002) PIAS proteins modulate transcription factors by functioning as SUMO-1 ligases. Mol. Cell. Biol. 22, 5222-5234
37. Seeler, J. S. and Dejean, A. (2003) Nuclear and unclear functions of SUMO. Nat. Rev. Mol. Cell Biol. 4, 690-699
38. Song, J., Durrin, L. K., Wilkinson, T. A., Krontiris, T. G. and Chen, Y. (2004) Identification of a SUMO-binding motif that recognizes SUMO-modified proteins. Proc. Natl. Acad. Sci. U.S.A. 101, 14373-14378
39. Hoege, C., Pfander, B., Moldovan, G. L., Pyrowolakis, G. and Jentsch, S. (2002) RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO. Nature (London) 419, 135-141
40. Alexeev, A., Mazin, A. and Kowalczykowski, S. C. (2003) Rad54 protein possesses chromatin-remodeling activity stimulated by the Rad51-ssDNA nucleoprotein filament. Nat. Struct. Biol. 10, 182-186
41. Jaskelioff, M., Van Kornen, S., Krebs, J. E., Sung, P. and Peterson, C. L. (2003) Rad54p is a chromatin remodeling enzyme required for heteroduplex DNA joint formation with chromatin. J. Biol. Chem. 278, 9212-9218
42. Petukhova, G., Stratton, S. and Sung, P. (1998) Catalysis of homologous DNA pairing by yeast Rad51 and Rad54 proteins. Nature (London) 393, 91-94
43. Allard, S., Masson, J. Y. and Cote, J. (2004) Chromatin remodeling and the maintenance of genome integrity. Biochim. Biophys. Acta 1677, 158-164
44. Lin, D. Y., Fang, H. I., Ma, A. H., Huang, Y. S., Pu, Y. S., Jenster, G., Kung, H. J. and Shih, H. M. (2004) Negative modulation of androgen receptor transcriptional activity by Daxx. Mol. Cell. Biol. 24, 10529-10541
45. Sitz, J. H., Tigges, M., Baumgartel, K., Khaspekov, L. G. and Lutz, B. (2004) Dyrk1A potentiates steroid hormone-induced transcription via the chromatin remodeling factor Arip4. Mol. Cell. Biol. 24, 5821-5834