Cyan-emitting and orange-emitting fluorescent proteins as a donor/acceptor pair for fluorescence resonance energy transfer

Biochemical Journal

Volumn 381, Issue 1, 2004, Pages 307-312

  Karasawa, Satoshi ^a,b,c   Araki, Toshio ^a,b,c   Nagai, Takeharu ^a,d   Mizuno, Hideaki ^a   Miyawaki, Atsushi ^a  

^a RIKEN BRAIN SCIENCE INSTITUTE   (Japan)

^b Amalgaam Co Ltd   (Japan)

^c Medical & Biological Laboratories Co Ltd   (Japan)

^d Japan Science and Technology Agency   (Japan)

Author keywords

Donor acceptor pair; Fluorescence resonance energy transfer (FRET); Green fluorescent protein (GFP); Green fluorescent protein (GFP) like protein

Indexed keywords

BIOTECHNOLOGY; CHEMICAL ANALYSIS; ENERGY TRANSFER; FLUORESCENCE; IMAGING TECHNIQUES; MOLECULAR STRUCTURE; OLIGOMERS; PROTEINS;

APOPTOSIS; STONY CORALS;

BIOCHEMISTRY;

CASPASE 3; CYAN FLUORESCENT PROTEIN;

AMINO ACID SUBSTITUTION; APOPTOSIS; ARTICLE; ENZYME ACTIVITY; FEMALE; FLUORESCENCE; FLUORESCENCE RESONANCE ENERGY TRANSFER; HELA CELL; HUMAN; HUMAN CELL; IMAGING SYSTEM; MOLECULAR CLONING; OLIGOMERIZATION; PH; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; QUANTUM YIELD;

AMINO ACID SEQUENCE; AMINO ACIDS; ANIMALS; ANTHOZOA; BACTERIAL PROTEINS; CASPASE 3; CASPASES; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT DYES; GREEN FLUORESCENT PROTEINS; HYDROGEN-ION CONCENTRATION; LUMINESCENT PROTEINS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED;

ANTHOZOA; FUNGIA; FUNGIA CONCINNA; RENILLA; RENILLA RENIFORMIS; SCLERACTINIA;

EID: 3142736368     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/BJ20040321     Document Type: Article

References (20)

1. Tsien, R. Y. (1998) The green fluorescent protein. Annu. Rev. Biochem. 67, 509-544
2. Matz, M. V., Fradokov, A. F., Labas, Y. A., Savitsky, A. P., Zaraisky, A. G., Markelov, M. L. and Lukyanov, S. A. (1999) Fluorescent proteins from nonbioluminescent Anthozoa species. Nat. Biotechnol. 17, 969-973
3. Labas, Y. A., Gurskaya, N. G., Yanushevich, Y. G., Fradkov, A. F., Lukyanov, K. A., Lukyanov, S. A. and Matz, M. V. (2002) Diversity and evolution of the green fluorescent protein family. Proc. Natl. Acad. Sci. U.S.A. 99, 4256-4261
4. Miyawaki, A. (2002) Green fluorescent protein-like proteins in reef Anthozoa animals. Cell Struct. Funct. 27, 343-347
5. Chomczynski, P. and Sacchi, N. (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162, 156-159
6. Sawano, A. and Miyawaki, A. (2000) Directed evolution of green fluorescent protein by a new versatile PCR strategy for site-directed and semi-random mutagenesis. Nucleic Acids Res. 28, E78
7. 2+. Proc. Natl. Acad. Sci. U.S.A. 98, 3197-3202
8. Baird, G. S., Zacharias, D. A. and Tsien, R. Y. (2000) Biochemistry, mutagenesis, and oligomerization of DsRed, a red fluorescent protein from coral. Proc. Natl. Acad. Sci. U.S.A. 99, 11984-11989
9. Ward, W. W. and Cormier, M. J. (1979) An energy transfer protein in coelenterate bioluminescence: Characterization of the Renilla green-fluorescent protein (GFP). J. Biol. Chem. 254, 781-788
10. Tsurui, H., Nishimura, H., Hattori, S., Hirose, S., Okumura, K. and Shiral, T. (2000) Seven-color fluorescence imaging of tissue samples based on Fourier spectroscopy and singular value decomposition. J. Histochem. Cytochem. 48, 653-662
11. Campbell, R. E., Tour, O., Palmer, A. E., Steinbach, P. A., Baird, G. S., Zacharias, D. A. and Tsien, R. Y. (2002) A monomeric red fluorescent protein. Proc. Natl. Acad. Sci. U.S.A. 99, 7877-7882
12. Karasawa, S., Araki, T., Yamamoto-Hino, M. and Miyawaki, A. (2003) A green-emitting fluorescent protein from Galaxeidae coral and its monomeric version for use in fluorescent labeling. J. Biol. Chem. 278, 34167-34171
13. Tyas, L., Brophy, V. A., Pope, A., Rivett, A. J. and Tavaré, J. M. (2000) Rapid caspase-3 activation during apoptosis revealed using fluorescence-resonance energy transfer. EMBO Rep. 1, 266-270
14. Takemoto, K., Nagai, T., Miyawaki, A. and Miura, M. (2003) Spatio-temporal activation of caspase revealed by indicator that is insensitive to environmental effects. J. Cell Biol. 160, 235-243
15. Miyawaki, A. and Tsien, R. Y. (2000) Monitoring protein conformations and interactions by fluorescence resonance energy transfer between mutants of green fluorescent protein. Methods Enzymol. 327, 472-500
16. Griesbeck, O., Baird, G. S., Campbell, R. E., Zacharias, D. A. and Tsien, R. Y. (2001) Reducing the environmental sensitivity of yellow fluorescent protein: mechanism and applications. J. Biol. Chem. 276, 29188-29194
17. Nagai, T., Ibata, K., Park, E. S., Kubota, M., Mikoshiba, K. and Miyawaki, A. (2002) A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat. Biotechnol. 20, 87-90
18. Erickson, M. G., Moon, D. L. and Yue, D. T. (2003) DsRed as a potential FRET partner with CFP and GFP. Biophys. J. 85, 599-611
19. Patterson, G. H., Piston, D. W. and Barisas, B. G. (2000) Förster distances between green fluorescent protein pairs. Anal. Biochem. 284, 438-440
20. Yang, F., Moss, L. G. and Phillips, Jr, G. N. (1996) The molecular structure of green fluorescent protein. Nat. Biotechnol. 14, 1246-1251