Seven-color fluorescence imaging of tissue samples based on fourier spectroscopy and singular value decomposition

Journal of Histochemistry and Cytochemistry

Volumn 48, Issue 5, 2000, Pages 653-662

  Tsurui, Hiromichi ^a,c   Nishimura, Hiroyuki ^b   Hattori, Susumu ^a   Hirose, Sachiko ^a   Okumura, Ko ^a,c   Shirai, Toshikazu ^a  

^a JUNTENDO UNIVERSITY SCHOOL OF MEDICINE   (Japan)

^b TOIN UNIVERSITY OF YOKOHAMA   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

Fluorescence image; Fourier spectroscopy; Hyperspectral imaging; Linear unmixing; Multicolor imaging; Singular value decomposition

Indexed keywords

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; FLUORESCENCE; FOURIER ANALYSIS; IMAGE ANALYSIS; MOUSE; NONHUMAN; PRIORITY JOURNAL; SIGNAL PROCESSING; STAINING;

ANIMALIA;

EID: 0034109885     PISSN: 00221554     EISSN: None     Source Type: Journal    
DOI: 10.1177/002215540004800509     Document Type: Article

References (24)

1. Anderson MT, Baumgarth N, Haugland RP, Gerstein RM, Tjioe T, Herzenberg LA, Herzenberg LA (1998) Pairs of violet-light-excited fluorochromes for flow cytometric analysis. Cytometry 33:435-444
2. Bigos M, Baumgarth N, Jager GC, Herman OC, Nozaki T, Stovel RT, Parks DR, Herzenherg LA ( 1999) Nine color eleven parameter immunophenotyping using three laser cytometry. Cytometry 36:36-4.5
3. Boardman JW (1989) Inversion of imaging spectrometry data using singular value decomposition. Proc 1GARSS'89 Sensing 4:2069-2072
4. Borse, GJ (1997) Numerical Methods With MATLAB®: A Resource for Scientists and Engineers. Boston, PWS Publishing Company.
5. Garini Y, Gil A, Bar-Am I, Cabib D, Katzir N (1999) Signal to noise analysis of multiple color fluorescence imaging microscopy. Cytometry 35:214-226
6. Garini Y, Katzir K, Cabib D, Buckwald RA, Soenksen DG, Malik Z (1996) Spectral Bio-imaging. In Wang XF, Herman B, eds. Fluorescence Imaging Spectroscopy and Microscopy. New York, Wiley, 87-124
7. Golub GH, Van Loan CF ( 1983) Matrix Computations. Baltimore, Johns Hopkins University Press
8. Herzenberg LA, Sweet RG, Herzenherg LA (1976) Fluorescence activated cell sorting. Sci Am 234:108-117
9. Liyanage M, Coleman A, duManoir S, Veldman T, McCormack S, Dickson RB, Barlow C, Wynshaw-Boris A, Janz S, Wienberg J, Ferguson-Smith MA, Schröck E, Ried T (1996) Multicolor spectral karyotyping of mouse chromosomes. Nature Genet 14:312-315
10. MacVille M, Schrock E, Padilla-Nash H, Keck C, Ghadimi BM, Zimonjic D, Popescu N, Ried T (1999) Comprehensive and definitive molecular cytogenetic characterization of HeLa cells by spectral karyotyping. Cancer Res 59:141-150
11. Malik Z, Cabib D, Buckwald RA, Talmi A, Garini Y, Lipson SG (1996) Fourier transform multipixel spectroscopy for quantitative cytology. J Microsc 182:133-140
12. Malik Z, Rothmann C, Cycowitz T, Cycowitz ZJ, Cohen AM (1998) Spectral morphometric characterization of B-CLL cells verses normal small lymphocytes. J Histochem Cytochem 46: 1113-1118
13. Mallick CA, Dudley EC, Viney JL, Owen MJ, Hayday AC (1993) Rearrangement and diversity of T cell receptor β chain genes in thymocytes: a critical role for the β chain in development. Cell 73:513-519
14. McCormack SJ, Weaver Z, Deming S, Natarajan G, Torri J, Johnson MD, Liyanage M, Ried T (1998) Myc/p53 interactions in transgenic mouse mammary development, tumorigenesis and chromosomal instability. Oncogene 16:2755-2766
15. Press WH, Flannery BP, Teukolsky SA, Vetterling WT (1986) Numerical Recipes. New York, Cambridge University Press
16. Robbin JW (1995) Matrix Algebra using MINImal MATlab, Wellesley, MA, AK Peters
17. Roederer M, DeRosa S, Gerstein R, Anderson M, Bigos M, Stovel R, Nozaki T, Parks D, Herzenberg LA, Herzenberg LA (1997) 8 color, 10-parameter flow cytometry to elucidate complex leukocyte heterogeneity. Cytometry 29:328-339
18. Schneider R (1993) Convex Bodies: The Brunn-Minkowski Theory. New York, Cambridge University Press
19. Schröck E, du Manoir S, Veldman T, Schoell B, Wienberg J, Ferguson-Smith MA, Ning Y, Ledbetter DH, Bar-Am I, Soenksen D, Garini Y, Ried T (1996) Multicolor spectral karyotyping of human chromosomes. Science 273:494-497
20. Schröck E, Veldman T, Padilla-Nash H, Ning Y, Spurheck J, Jalal S, Shaffer LG, Papenhausen P, Kozma C, Phelan MC, Kjeldsen E, Schonberg SA, O'Bnen P, Biesecker L, du Manoir S, Ried T (1997) Spectral karyotyping refines cytogenetic diagnostics of constitutional chromosomal abnormalities. Hum Genet 101: 255-262
21. Tanaka Y, Ardouin L, Gillet A, Lin SY, Magnan A, Malissen B, Malissen M (1995) Early T-cell development in CD3-deficient mice. Immunol Rev 148:171-199
22. Tsurui H, Lerner JM, Takahashi K, Hirose S, Mitsui K, Okumura K, Shirai T (1999) Hyperspectral imaging of pathology samples. Proc SPIE 3605:273-281
23. Veldman T, Vignon C, Schröck E, Rowley JD, Ried T (1997) Hidden chromosome abnormalities in haematological malignancies detected by multicolor spectral karyotyping. Nature Genet 15: 406-410
24. Watanabe N, DeRosa SC, Cmelak A, Hoppe R, Herzenberg LA, Herzenberg LA, Roederer M (1997) Long-term depletion of naive T cells in patients treated for Hodgkin's disease. Blood 90:3662-3672