Characterization of the effectiveness of hexose transporters for transporting xylose during glucose and xylose co-fermentation by a recombinant Saccharomyces yeast

Yeast

Volumn 21, Issue 8, 2004, Pages 671-684

  Sedlak, Miroslav ^a   Ho, Nancy W Y ^a  

^a PURDUE UNIVERSITY   (United States)

Author keywords

Glucose xylose confermentation; Microarray; Recombinant Saccharomyces yeast; Xylose transport

Indexed keywords

GLUCOSE; GLUCOSE TRANSPORTER; PLASMID DNA; XYLOSE;

ARTICLE; BACTERIAL STRAIN; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DNA ISOLATION; DNA MICROARRAY; ESCHERICHIA COLI; FERMENTATION; FUNGAL STRAIN; GENE AMPLIFICATION; GENE CONSTRUCT; GENE EXPRESSION PROFILING; GENETIC CODE; GENETIC TRANSCRIPTION; HEXOSE TRANSPORT; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RNA HYBRIDIZATION; SACCHAROMYCES CEREVISIAE; YEAST;

FERMENTATION; GALACTOSE; GENE EXPRESSION PROFILING; GLUCOSE; MEMBRANE PROTEINS; MONOSACCHARIDE TRANSPORT PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; XYLOSE;

SACCHAROMYCES; SACCHAROMYCES CEREVISIAE;

EID: 3042769437     PISSN: 0749503X     EISSN: None     Source Type: Journal    
DOI: 10.1002/yea.1060     Document Type: Article

References (40)

1. Barnett JA. 1976. The utilization of sugars by yeasts. Adv Carbohydr Chem Biochem 32: 125-234.
2. Becker D, Guarente L. 1991. High efficiency transformation of yeast by electroporation. Methods Enzymol 194: 182-186.
3. Birnboim HC, Doly J. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7: 1513-1523.
4. Boles E, Hollenberg CP. 1997. The molecular genetics of hexose transport in yeasts. FEMS Microbiol Rev 21: 85-111.
5. Chevallier MR, Aigle M. 1979. Qualitative detection of penicillinase produced by yeast strains carrying chimeric yeast-coli plasmids. FEBS Lett 108: 179-180.
6. Cirillo VP. 1968. Relationship between sugar structure and competition for the sugar transport system in baker's yeast. J Bacteriol 95: 603-611.
7. DeRisi JL, Iyer VR, Brown PO. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
8. Diderich JA, Schepper M, van Hoek P, et al. 1999. Glucose uptake kinetics and transcription of HXT genes in chemostat cultures of Saccharomyces cerevisiae. J Biol Chem 274: 15 350-15 359.
9. Diderich JA, Schuurmans JM, van Gaalen MC, et al. 2001. Functional analysis of the hexose transporter homologue HXT5 in Saccharomyces cerevisiae. Yeast 18: 1515-1524.
10. Green JBA, Wright APH, Cheung WY, Lancashire WE, Hartley BS. 1988. The structure and regulation of phosphoglucose isomerase in Saccharomyces cerevisiae. Mol Gen Genet 215: 100-106.
11. Hamacher T, Becker J, Gardonyi M, Hahn-Hagerdal B, Boles E. 2002. Characterization of xylose-transporting properties of yeast hexose transporters and their influence on xylose utilization. Microbiology 148: 2783-2788.
12. Ho NWY, Chen ZD. 1997. Stable recombinant yeasts capable of effective fermentation of both glucose and xylose. PCT Patent No.WO97/42307.
13. Ho NWY, Chen Z, Brainard A. 1998a. Genetically engineered Saccharomyces yeast capable of effective co-fermentation of glucose and xylose. Appl Environ Microbiol 64: 1852-1859.
14. Ho NWY, Tsao GT. 1998b. Recombinant yeasts for effective fermentation of glucose and xylose. US Patent Application, #08/148, 581, Patent No. 5,789, 210.
15. Ho NWY, Chen Z, Brainard AP, Sedlak M. 1999. Successful design and development of genetically engineered Saccharomyces yeasts for effective co - fermentation of glucose and xylose from cellulosic biomass to fuel ethanol. In Advances in Biochemical Engineering/Biotechnology, Tsao GT (ed.). Springer-Verlag: Berlin.
16. Ho NWY, Chen Z, Brainard AP, Sedlak M. 2000. Genetically engineered Saccharomyces yeasts for conversion of cellulosic biomass to environmentally friendly transportation fuel ethanol In ACS Symposium Series 767. American Chemical Society: New York; 142-159.
17. Horton MHD, Hunt R, Ho SN, Pullen JK, Pease LR. 1989. Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77: 61-68.
18. Kilian SG, van Uden N. 1988. Transport of xylose and glucose in the xylose-fermenting yeast Pichia stipitis. Appl Microb Biotechnol 27: 545-548.
19. Kilian SG, Prior BA, du Preez JC. 1993. The kinetics and regulation of D-xylose transport in Candida utilis. World J Microbiol Biotechnol 9: 357-360.
20. Kötter P, Ciriacy M. 1993. Xylose fermentation by Saccharomyces cerevisiae. Appl Microbiol Biotechnol 38: 776-783.
21. Kotyk A. 1967. Mobility of free and the loaded monosaccharide carrier in Saccharomyces cerevisiae. Biochim Biophys Acta 135: 112-119.
22. Kou S-C, Christensen MS, Cirillo VP. 1970. Galactose transport in Saccharomyces cerevisiae. J Bacteriol 103: 671-670.
23. Lagunas R, Dominguez C, Busturia A, Saez MJ. 1982. Mechanisms of the appearance of the Pasteur effect in Saccharomyces cerevisiae: inactivation of sugar transport system. J Bacteriol 152: 19-25.
24. Lee W-J, Kim M-D, Ryu Y-W, Bisson LF, Seo J-H. 2002. Kinetic studies on glucose and xylose transport in Saccharomyces cerevisiae. Appl Microbiol Biotechnol 60: 186-191.
25. Lin R-J, Kim D-H, Castanotto D, Westaway S, Rossi JJ. 1996. RNA preparation from yeast cells. In A Laboratory Guide to RNA: Isolation, Analysis and Synthesis, Krieg PA (ed.). Wiley-Liss: New York; 43-50.
26. Maniatis T, Fritsch EF, Sambrook J. 1982. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press: New York.
27. Neigeborn L, Schwartzberg P, Reid R, Carlson M. 1986. Null mutations in the SNF3 gene of Saccharomyces cerevisiae cause a different phenotype than do previously missense mutations. Mol Cell Biol 6: 3569-3574.
28. Ozcan S, Dover J, Rosenwald AG, Wolf S, Johnston M. 1996. Two glucose transporters in Saccharomyces cerevisiae are glucose sensors that generate a signal for induction of gene expression. Proc Natl Acad Sci USA 93: 12 428-12 432.
29. Ozcan S, Johnston M. 1999. Function and regulation of yeast hexose transporters. Microbiol Mol Biol Rev 63: 554-569.
30. Reifenberg E, Fredel K, Ciriacy M. 1995. Identification of novel HXT genes in Saccharomyces cereviaiae reveals the impact of individual hexose transporters on glycolitic flux. Mol Microbiol 16: 157-167.
31. Reifenberg E, Fredel K, Ciriacy M. 1997. Kinetic characterization of individual hexose transporters of Saccharomyces cerevisiae and their relations to triggering mechanisms of glucose repression. Eur J Biochem 245: 324-333.
32. Saiki RK, Gelfand DH, Stoffel S, et al. 1988. Primer-directed enzymatic amplification of DNA with a thermostable polymerase. Science 239: 487-491.
33. Sedlak M, Ho NWY. 2001. Expression of E. coli araBAD operon encoding enzymes for metabolizing L-arabinose in Saccharomyces cerevisiae. Enzyme Microbiol Technol 28: 16-24.
34. Sedlak M, Edenberg HJ, Ho NWY. 2003. DNA microarray analysis of the expression of the genes encoding major enzymes in ethanol production during glucose and xylose co-fermentation by metabolically engineered Saccharomyces yeast. Enzyme Microbiol Technol 33: 19-28.
35. Sharrocks AD. 1994. The design of primers for PCR. In PCR Technology: Current Innovations, Griffin HG, Griffin AM (ed.). CRC Press: Boca Raton, FL; 5-11.
36. Taketo A. 1988. DNA transfection of Escherichia coli by electroporation. Biochim Biophys Acta 949: 318-324.
37. Traff KL, Otero-Cordero RR, van Zyl WH, Hahn-Hagerdal B. 2001. Deletion of GRE3 aldose reductase, gene and its influence on xylose metabolism in recombinant strains of Saccharomyces cerevisiae expressing the xylA and XKS1 genes. Appl Enviroment Microbiol 67: 5668-5674.
38. Weierstall T, Hollenberg CP, Boles E. 1999. Cloning and characterization of tree genes (SUT1-3) encoding glucose transporters of the yeast Pichia stipitis. Mol Microbiol 31: 871-883.
39. Wieczorke R, Krampe S, Weierstall T, et al. 1999. Concurrent knock-out of at least 20 transporter genes is required to block uptake of hexoses in Saccharomyces cerevisiae. FEBS 464: 123-128.
40. Ye L, Berden JA, van Dam K, Kruckeberg AL. 2001. Expression and activity of the Hxt7 high-affinity hexose transporter of Saccharomyces cerevisiae. Yeast 18: 1257-1267.