-
1
-
-
0141609704
-
A new phylogenetic marker, apolipoprotein B, provides compelling evidence for eutherian relationships
-
Amrine-Madsen, H., K. P. Koepfli, R. K. Wayne, and M. S. Springer. 2003. A new phylogenetic marker, apolipoprotein B, provides compelling evidence for eutherian relationships. Mol. Phylogenet. Evol. 28:225-240.
-
(2003)
Mol. Phylogenet. Evol.
, vol.28
, pp. 225-240
-
-
Amrine-Madsen, H.1
Koepfli, K.P.2
Wayne, R.K.3
Springer, M.S.4
-
2
-
-
0033015732
-
Archaea sister group of Bacteria? Indications from tree reconstruction artifacts in ancient phylogenies
-
Brinkmann, H., and H. Philippe. 1999. Archaea sister group of Bacteria? Indications from tree reconstruction artifacts in ancient phylogenies. Mol. Biol. Evol. 16:817-825.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 817-825
-
-
Brinkmann, H.1
Philippe, H.2
-
3
-
-
0001899693
-
Invariants of phylogenies in a simple case with discrete states
-
Cavender, J. A., and J. Felsenstein. 1987. Invariants of phylogenies in a simple case with discrete states. J. Classif. 4: 57-71.
-
(1987)
J. Classif.
, vol.4
, pp. 57-71
-
-
Cavender, J.A.1
Felsenstein, J.2
-
4
-
-
0141685723
-
Comment on "Hexapod origins: Monophyletic or paraphyletic?"
-
Delsuc, F., M. J. Phillips, and D. Penny. 2003. Comment on "Hexapod origins: monophyletic or paraphyletic?" Science 301:1482d.
-
(2003)
Science
, vol.301
-
-
Delsuc, F.1
Phillips, M.J.2
Penny, D.3
-
5
-
-
0036792101
-
Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting
-
Delsuc, F., M. Scally, O. Madsen, M. J. Stanhope, W. W. de Jong, F. M. Catzeflis, M. S. Springer, and E. J. P. Douzery. 2002. Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting. Mol. Biol. Evol. 19:1656-1671.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1656-1671
-
-
Delsuc, F.1
Scally, M.2
Madsen, O.3
Stanhope, M.J.4
De Jong, W.W.5
Catzeflis, F.M.6
Springer, M.S.7
Douzery, E.J.P.8
-
6
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
7
-
-
2442667686
-
Four new avian mitochondrial genomes help get to basic evolutionary questions in the late Cretaceous
-
in press
-
Harrison, G. L., P. A. McLenachan, M. J. Phillips, K. E. Slack, A. Cooper, and D. Penny. 2004. Four new avian mitochondrial genomes help get to basic evolutionary questions in the late Cretaceous. Mol. Biol. Evol. 21: (in press).
-
(2004)
Mol. Biol. Evol.
, vol.21
-
-
Harrison, G.L.1
McLenachan, P.A.2
Phillips, M.J.3
Slack, K.E.4
Cooper, A.5
Penny, D.6
-
8
-
-
0000662336
-
Hadamard conjugation-a versatile tool for modelling nucleotide-sequence evolution
-
Hendy, M. D., and M. A. Charleston 1993. Hadamard conjugation-a versatile tool for modelling nucleotide-sequence evolution. N. Z. J. Bot. 31:231-237.
-
(1993)
N. Z. J. Bot.
, vol.31
, pp. 231-237
-
-
Hendy, M.D.1
Charleston, M.A.2
-
9
-
-
11944260381
-
Approaches for assessing phylogenetic accuracy
-
Hillis, D. M. 1995. Approaches for assessing phylogenetic accuracy. Syst. Biol. 44:3-16.
-
(1995)
Syst. Biol.
, vol.44
, pp. 3-16
-
-
Hillis, D.M.1
-
10
-
-
1342347024
-
Spectronet: A package for computing spectra and median networks
-
Huber, K. T., M. Langton, D. Penny, V. Moulton, and M. D. Hendy. 2002. Spectronet: a package for computing spectra and median networks. Appl. Bioinf. 1:159-161.
-
(2002)
Appl. Bioinf.
, vol.1
, pp. 159-161
-
-
Huber, K.T.1
Langton, M.2
Penny, D.3
Moulton, V.4
Hendy, M.D.5
-
11
-
-
0028361182
-
Recovering evolutionary trees under a more realistic model of sequence evolution
-
Lockhart, P. J., M. Steel, M. D. Hendy, and D. Penny. 1994. Recovering evolutionary trees under a more realistic model of sequence evolution. Mol. Biol. Evol. 11:605-612.
-
(1994)
Mol. Biol. Evol.
, vol.11
, pp. 605-612
-
-
Lockhart, P.J.1
Steel, M.2
Hendy, M.D.3
Penny, D.4
-
12
-
-
0036134757
-
Heterotachy, an important process in protein evolution
-
Lopez, P., D. Casane, and H. Philippe. 2002. Heterotachy, an important process in protein evolution. Mol. Biol. Evol. 19: 1-7.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1-7
-
-
Lopez, P.1
Casane, D.2
Philippe, H.3
-
13
-
-
0022472311
-
Estimating the reliability of evolutionary trees
-
Penny, D., and M. D. Hendy. 1986. Estimating the reliability of evolutionary trees. Mol. Biol. Evol. 3:403-417.
-
(1986)
Mol. Biol. Evol.
, vol.3
, pp. 403-417
-
-
Penny, D.1
Hendy, M.D.2
-
14
-
-
0026495826
-
Progress with methods for constructing evolutionary trees
-
Penny, D., M. D. Hendy, and M. Steel. 1992. Progress with methods for constructing evolutionary trees. Trends Ecol. Evol. 7:73-79.
-
(1992)
Trends Ecol. Evol.
, vol.7
, pp. 73-79
-
-
Penny, D.1
Hendy, M.D.2
Steel, M.3
-
15
-
-
0034919016
-
Mitochondrial genomes of a bandicoot and a brushtail possum confirm the monophyly of australidelphian marsupials
-
Phillips, M. J., Y.-H. Lin, G. L. Harrison, and D. Penny. 2001. Mitochondrial genomes of a bandicoot and a brushtail possum confirm the monophyly of australidelphian marsupials. Proc. R. Soc. Lond. B Biol. Sci. 268:1533-1538.
-
(2001)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.268
, pp. 1533-1538
-
-
Phillips, M.J.1
Lin, Y.-H.2
Harrison, G.L.3
Penny, D.4
-
16
-
-
0141721426
-
The root of the mammalian tree inferred from whole mitochondrial genomes
-
Phillips, M. J., and D. Penny. 2003. The root of the mammalian tree inferred from whole mitochondrial genomes. Mol. Phylogenet. Evol. 28:171-185.
-
(2003)
Mol. Phylogenet. Evol.
, vol.28
, pp. 171-185
-
-
Phillips, M.J.1
Penny, D.2
-
17
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada, D., and K. A. Crandall. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
18
-
-
0035252353
-
Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants
-
Pryer, K. M., H. Schneider, A. R. Smith, R. Cranfill, P. G. Wolf, J. S. Hunt, and S. D. Sipes. 2001. Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants. Nature 409:618-622.
-
(2001)
Nature
, vol.409
, pp. 618-622
-
-
Pryer, K.M.1
Schneider, H.2
Smith, A.R.3
Cranfill, R.4
Wolf, P.G.5
Hunt, J.S.6
Sipes, S.D.7
-
19
-
-
0242365676
-
Genome-scale approaches to resolving incongruence in molecular phylogenies
-
Rokas, A., B. L. Williams, N. King, and S. B. Carroll. 2003. Genome-scale approaches to resolving incongruence in molecular phylogenies. Nature 425:798-804.
-
(2003)
Nature
, vol.425
, pp. 798-804
-
-
Rokas, A.1
Williams, B.L.2
King, N.3
Carroll, S.B.4
-
20
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira, H., and M. Hasegawa. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114-1116.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
21
-
-
0033085041
-
Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition
-
Springer, M. S., H. M. Amrine, A. Burk, and M. J. Stanhope. 1999. Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition. Syst. Biol. 48:65-75.
-
(1999)
Syst. Biol.
, vol.48
, pp. 65-75
-
-
Springer, M.S.1
Amrine, H.M.2
Burk, A.3
Stanhope, M.J.4
-
22
-
-
0034350429
-
Invariable sites models and their use in phylogeny reconstruction
-
Steel, M., D. Huson, and P. J. Lockhart. 2000. Invariable sites models and their use in phylogeny reconstruction. Syst. Biol. 49:225-232.
-
(2000)
Syst. Biol.
, vol.49
, pp. 225-232
-
-
Steel, M.1
Huson, D.2
Lockhart, P.J.3
-
24
-
-
0021084212
-
Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes
-
Templeton, A. 1983. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes. Evolution 37:221-244.
-
(1983)
Evolution
, vol.37
, pp. 221-244
-
-
Templeton, A.1
-
25
-
-
0025952777
-
Archaeal phylogeny: Reexamination of the phylogenetic position of Archaeoglobus fulgidus in light of certain composition-induced artifacts
-
Woese, C. R., L. Achenbach, P. Rouviere, and L. Mandelco. 1991. Archaeal phylogeny: reexamination of the phylogenetic position of Archaeoglobus fulgidus in light of certain composition-induced artifacts. Syst. Appl. Microbiol. 14:364-371.
-
(1991)
Syst. Appl. Microbiol.
, vol.14
, pp. 364-371
-
-
Woese, C.R.1
Achenbach, L.2
Rouviere, P.3
Mandelco, L.4
-
26
-
-
0028214103
-
Estimating the pattern of nucleotide substitution
-
Yang, Z. 1994. Estimating the pattern of nucleotide substitution. J. Mol. Evol. 39:105-111.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 105-111
-
-
Yang, Z.1
|