메뉴 건너뛰기




Volumn 32, Issue 10, 2004, Pages 3070-3082

The Drosophila Bruno paralogue Bru-3 specifically binds the EDEN translational repression element

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; BRU 2 PROTEIN; BRU 3 PROTEIN; BRUNO LIKE PROTEIN; BRUNO PROTEIN; CUG BINDING PROTEIN; DIMER; DROSOPHILA PROTEIN; EDEN BINDING PROTEIN; EDEN PROTEIN; MESSENGER RNA; PROTEIN P45; REPRESSOR PROTEIN; RNA BINDING PROTEIN; SEX LETHAL PROTEIN; UNCLASSIFIED DRUG; BRU 3 PROTEIN, DROSOPHILA; BRU-3 PROTEIN, DROSOPHILA; EDEN SPECIFIC RNA BINDING PROTEIN, XENOPUS; EDEN-SPECIFIC RNA-BINDING PROTEIN, XENOPUS; RNA; XENOPUS PROTEIN;

EID: 2942685399     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh627     Document Type: Article
Times cited : (29)

References (38)
  • 1
    • 0035674402 scopus 로고    scopus 로고
    • Translational regulation and RNA localization in Drosophila oocytes and embryos
    • Johnstone,O. and Lasko,P. (2001) Translational regulation and RNA localization in Drosophila oocytes and embryos. Annu. Rev. Genet., 35, 365-406.
    • (2001) Annu. Rev. Genet. , vol.35 , pp. 365-406
    • Johnstone, O.1    Lasko, P.2
  • 2
    • 0024655246 scopus 로고
    • RNA-binding proteins as developmental regulators
    • Bandziulis,R.J., Swanson,M.S. and Dreyfuss,G. (1989) RNA-binding proteins as developmental regulators. Genes Dev., 3, 431-437.
    • (1989) Genes Dev. , vol.3 , pp. 431-437
    • Bandziulis, R.J.1    Swanson, M.S.2    Dreyfuss, G.3
  • 3
    • 0037304408 scopus 로고    scopus 로고
    • Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins
    • Anantharaman,V., Aravind,L. and Koonin,E.V. (2003) Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins. Curr. Opin. Chem. Biol., 7, 12-20.
    • (2003) Curr. Opin. Chem. Biol. , vol.7 , pp. 12-20
    • Anantharaman, V.1    Aravind, L.2    Koonin, E.V.3
  • 4
    • 0028129989 scopus 로고
    • Conserved structures and diversity of functions of RNA-binding proteins
    • Burd,C.G. and Dreyfuss,G. (1994) Conserved structures and diversity of functions of RNA-binding proteins. Science, 265, 615-621.
    • (1994) Science , vol.265 , pp. 615-621
    • Burd, C.G.1    Dreyfuss, G.2
  • 5
    • 0030858706 scopus 로고    scopus 로고
    • RNA-binding proteins as regulators of gene expression
    • Siomi,H. and Dreyfuss,G. (1997) RNA-binding proteins as regulators of gene expression. Curr. Opin. Genet. Dev., 7, 345-353.
    • (1997) Curr. Opin. Genet. Dev. , vol.7 , pp. 345-353
    • Siomi, H.1    Dreyfuss, G.2
  • 6
    • 0025761656 scopus 로고
    • RNA recognition: Towards identifying determinants of specificity
    • Kenan,D.J., Query,C.C. and Keene,J.D. (1991) RNA recognition: towards identifying determinants of specificity. Trends Biochem. Sci., 16, 214-220.
    • (1991) Trends Biochem. Sci. , vol.16 , pp. 214-220
    • Kenan, D.J.1    Query, C.C.2    Keene, J.D.3
  • 7
    • 0034666143 scopus 로고    scopus 로고
    • A family of human RNA-binding proteins related to the Drosophila Bruno translational regulator
    • Good,P.J., Chen,Q., Warner,S.J. and Herring,D.C. (2000) A family of human RNA-binding proteins related to the Drosophila Bruno translational regulator. J. Biol. Chem., 275, 28583-28592.
    • (2000) J. Biol. Chem. , vol.275 , pp. 28583-28592
    • Good, P.J.1    Chen, Q.2    Warner, S.J.3    Herring, D.C.4
  • 8
    • 0035146628 scopus 로고    scopus 로고
    • The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing
    • Ladd,A.N., Charlet,N. and Cooper,T.A. (2001) The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing. Mol. Cell. Biol., 21, 1285-1296.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 1285-1296
    • Ladd, A.N.1    Charlet, N.2    Cooper, T.A.3
  • 9
    • 0032472377 scopus 로고    scopus 로고
    • EDEN and EDEN-BP, a cis element and an associated factor that mediate sequence-specific mRNA deadenylation in Xenopus embryos
    • Paillard,L., Omilli,F., Legagneux,V., Bassez,T., Maniey,D. and Osborne,H.B. (1999) EDEN and EDEN-BP, a cis element and an associated factor that mediate sequence-specific mRNA deadenylation in Xenopus embryos. EMBO J., 17, 278-287.
    • (1999) EMBO J. , vol.17 , pp. 278-287
    • Paillard, L.1    Omilli, F.2    Legagneux, V.3    Bassez, T.4    Maniey, D.5    Osborne, H.B.6
  • 10
    • 0027514572 scopus 로고
    • Isolation of RRM-type RNA-binding protein genes and the analysis of their relatedness by using a numerical approach
    • Kim,Y.J. and Baker,B.S. (1993) Isolation of RRM-type RNA-binding protein genes and the analysis of their relatedness by using a numerical approach. Mol. Cell. Biol., 13, 174-183.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 174-183
    • Kim, Y.J.1    Baker, B.S.2
  • 11
    • 0032076126 scopus 로고    scopus 로고
    • Disruption of splicing regulated by a CUG-binding protein in triyotonic dystrophy
    • Philips,A.V., Timchenko,L.T. and Cooper,T.A. (1998) Disruption of splicing regulated by a CUG-binding protein in triyotonic dystrophy. Science, 280, 737-741.
    • (1998) Science , vol.280 , pp. 737-741
    • Philips, A.V.1    Timchenko, L.T.2    Cooper, T.A.3
  • 12
  • 13
    • 0034813301 scopus 로고    scopus 로고
    • Multifunctional regulatory proteins that control gene expression in both the nucleus and the cytoplasm
    • Wilkinson,M.F. and Shyu,A.B. (2001) Multifunctional regulatory proteins that control gene expression in both the nucleus and the cytoplasm. Bioessays, 23, 775-787.
    • (2001) Bioessays , vol.23 , pp. 775-787
    • Wilkinson, M.F.1    Shyu, A.B.2
  • 14
    • 0038377392 scopus 로고    scopus 로고
    • A functional deadenylation assay identifies human CUG-BP as a deadenylation factor
    • Paillard,L., Legagneux,V. and Beverley Osborne,H. (2003) A functional deadenylation assay identifies human CUG-BP as a deadenylation factor. Biol. Cell, 95, 107-113.
    • (2003) Biol. Cell , vol.95 , pp. 107-113
    • Paillard, L.1    Legagneux, V.2    Beverley Osborne, H.3
  • 15
    • 0029028583 scopus 로고
    • Translational regulation of oskar mRNA by bruno, an ovarian RNA-binding protein, is essential
    • Kim-Ha,J., Kerr,K. and Macdonald,P.M. (1995) Translational regulation of oskar mRNA by bruno, an ovarian RNA-binding protein, is essential. Cell, 81, 403-412.
    • (1995) Cell , vol.81 , pp. 403-412
    • Kim-Ha, J.1    Kerr, K.2    Macdonald, P.M.3
  • 16
    • 0030808440 scopus 로고    scopus 로고
    • Translational repressor bruno plays multiple roles in development and is widely conserved
    • Webster,P.J., Liang,L., Berg,C.A., Lasko,P. and Macdonald,P.M. (1997) Translational repressor bruno plays multiple roles in development and is widely conserved. Genes Dev., 11, 2510-2521.
    • (1997) Genes Dev. , vol.11 , pp. 2510-2521
    • Webster, P.J.1    Liang, L.2    Berg, C.A.3    Lasko, P.4    Macdonald, P.M.5
  • 17
    • 0037362201 scopus 로고    scopus 로고
    • Bruno regulates gurken during Drosophila oogenesis
    • Filardo,P. and Ephrussi,A. (2003) Bruno regulates gurken during Drosophila oogenesis. Mech. Dev., 120, 289-297.
    • (2003) Mech. Dev. , vol.120 , pp. 289-297
    • Filardo, P.1    Ephrussi, A.2
  • 18
    • 0033609121 scopus 로고    scopus 로고
    • Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal
    • Crowder,S.M., Kanaar,R., Rio,D.C. and Alber,T. (1999) Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal. Proc. Natl Acad. Sci. USA, 96, 4892-4897.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 4892-4897
    • Crowder, S.M.1    Kanaar, R.2    Rio, D.C.3    Alber, T.4
  • 20
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson,J.D., Gibson,T.J., Plewniak,F., Jeanmougin,F. and Higgins,D.G. (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 25, 4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 21
    • 17144434313 scopus 로고    scopus 로고
    • Hidden Markov model analysis of motifs in steroid debydrogenases and their homologs
    • Grundy,W.N., Bailey,T.L., Elkan,C.P. and Baker,M.E. (1997) Hidden Markov model analysis of motifs in steroid debydrogenases and their homologs. Biochem. Biophys. Res. Commun., 231, 760-766.
    • (1997) Biochem. Biophys. Res. Commun. , vol.231 , pp. 760-766
    • Grundy, W.N.1    Bailey, T.L.2    Elkan, C.P.3    Baker, M.E.4
  • 22
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
    • Hall,T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp. Ser., 41, 98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 98
    • Hall, T.A.1
  • 23
    • 0034843745 scopus 로고    scopus 로고
    • Easier threading through web-based comparisons and cross-validations
    • Douguet,D. and Labesse,G. (2001) Easier threading through web-based comparisons and cross-validations. Bioinformatics, 17, 752-753.
    • (2001) Bioinformatics , vol.17 , pp. 752-753
    • Douguet, D.1    Labesse, G.2
  • 24
    • 0031680752 scopus 로고    scopus 로고
    • Incremental threading optimization (TITO) to help alignment and modelling of remote homologues
    • Labesse,G. and Mornon,J. (1998) Incremental threading optimization (TITO) to help alignment and modelling of remote homologues. Bioinformatics, 14, 206-211.
    • (1998) Bioinformatics , vol.14 , pp. 206-211
    • Labesse, G.1    Mornon, J.2
  • 25
    • 0042511005 scopus 로고    scopus 로고
    • A graph-theory algorithm for rapid protein side-chain prediction
    • Canutescu,A.A., Shelenkov,A.A. and Dunbrack,R.L.,Jr (2003) A graph-theory algorithm for rapid protein side-chain prediction. Protein Sci., 12, 2001-2014.
    • (2003) Protein Sci. , vol.12 , pp. 2001-2014
    • Canutescu, A.A.1    Shelenkov, A.A.2    Dunbrack Jr., R.L.3
  • 26
    • 0027136282 scopus 로고
    • Comparative protein modelling by satisfaction of spatial restraints
    • Sali,A. and Blundell,T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol., 234, 779-815.
    • (1993) J. Mol. Biol. , vol.234 , pp. 779-815
    • Sali, A.1    Blundell, T.L.2
  • 27
    • 0030767485 scopus 로고    scopus 로고
    • VERIFY3D: Assessment of protein models with three-dimensional profiles
    • Eisenberg,D., Luthy,R. and Bowie,J.U. (1997) VERIFY3D: assessment of protein models with three-dimensional profiles. Methods Enzymol., 277, 396-404.
    • (1997) Methods Enzymol. , vol.277 , pp. 396-404
    • Eisenberg, D.1    Luthy, R.2    Bowie, J.U.3
  • 28
    • 0027490731 scopus 로고
    • Recognition of errors in three-dimensional structures of proteins
    • Sippl,M.J. (1993) Recognition of errors in three-dimensional structures of proteins. Proteins, 17, 355-362.
    • (1993) Proteins , vol.17 , pp. 355-362
    • Sippl, M.J.1
  • 30
    • 0027054705 scopus 로고
    • Identification of RNA-binding proteins specific to Xenopus Eg maternal mRNAs: Association with the portion of Eg2 mRNA that promotes deadenylation in embryos
    • Legagneux,V., Bouvet,P., Omilli,F., Chevalier,S. and Osborne,H.B. (1992) Identification of RNA-binding proteins specific to Xenopus Eg maternal mRNAs: association with the portion of Eg2 mRNA that promotes deadenylation in embryos. Development, 116, 1193-1202.
    • (1992) Development , vol.116 , pp. 1193-1202
    • Legagneux, V.1    Bouvet, P.2    Omilli, F.3    Chevalier, S.4    Osborne, H.B.5
  • 31
    • 0027507891 scopus 로고
    • Translational regulation of tra-2 by its 3′ untranslated region controls sexual identity in C. elegans
    • Goodwin,E.B., Okkema,P.G., Evans,T.C. and Kimble,J. (1993) Translational regulation of tra-2 by its 3′ untranslated region controls sexual identity in C. elegans. Cell, 75, 329-339.
    • (1993) Cell , vol.75 , pp. 329-339
    • Goodwin, E.B.1    Okkema, P.G.2    Evans, T.C.3    Kimble, J.4
  • 32
    • 0030825306 scopus 로고    scopus 로고
    • Identification of proteins binding specifically to the 3′-untranslated region of granulocyte/macrophage-colony stimulating factor mRNA
    • Bichsel,V.E., Walz,A. and Bickel,M. (1997) Identification of proteins binding specifically to the 3′-untranslated region of granulocyte/macrophage-colony stimulating factor mRNA. Nucleic Acids Res., 25, 2417-2423.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 2417-2423
    • Bichsel, V.E.1    Walz, A.2    Bickel, M.3
  • 33
    • 0034710226 scopus 로고    scopus 로고
    • The Drosophila melanogaster genome: Translation factors and RNA binding proteins
    • Lasko,P. (2000) The Drosophila melanogaster genome: translation factors and RNA binding proteins. J. Cell Biol., 150, F51-F56.
    • (2000) J. Cell Biol. , vol.150
    • Lasko, P.1
  • 34
    • 0036850732 scopus 로고    scopus 로고
    • An analysis of the sequence requirements of EDEN-BP for specific RNA binding
    • Bonnet-Corven,S., Audic,Y., Omilli,F. and Osborne,H.B. (2002) An analysis of the sequence requirements of EDEN-BP for specific RNA binding. Nucleic Acids Res., 30, 4667-4674.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4667-4674
    • Bonnet-Corven, S.1    Audic, Y.2    Omilli, F.3    Osborne, H.B.4
  • 35
    • 0033134777 scopus 로고    scopus 로고
    • Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA
    • Ding,J., Hayashi,M.K., Zhang,Y., Manche,L., Krainer,A.R. and Xu,R.M. (1999) Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA. Genes Dev., 13, 1102-1115.
    • (1999) Genes Dev. , vol.13 , pp. 1102-1115
    • Ding, J.1    Hayashi, M.K.2    Zhang, Y.3    Manche, L.4    Krainer, A.R.5    Xu, R.M.6
  • 36
    • 0034703626 scopus 로고    scopus 로고
    • The CUG-binding protein binds specifically to UG dinucleotide repeats in a yeast three-hybrid system
    • Takahashi,N., Sasagawa,N., Suzuki,K. and Ishiura,S. (2000) The CUG-binding protein binds specifically to UG dinucleotide repeats in a yeast three-hybrid system. Biochem. Biophys. Res. Commun., 277, 518-523.
    • (2000) Biochem. Biophys. Res. Commun. , vol.277 , pp. 518-523
    • Takahashi, N.1    Sasagawa, N.2    Suzuki, K.3    Ishiura, S.4
  • 37
    • 0033556127 scopus 로고    scopus 로고
    • RNA binding strategies of ribosomal proteins
    • Draper,D.E. and Reynaldo,L.P. (1999) RNA binding strategies of ribosomal proteins. Nucleic Acids Res., 27, 381-388.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 381-388
    • Draper, D.E.1    Reynaldo, L.P.2
  • 38
    • 0032961270 scopus 로고    scopus 로고
    • ESPript: Analysis of multiple sequence alignments in PostScript
    • Gouet,P., Courcelle,E., Stuart,D.I. and Metoz,F. (1999) ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics, 15, 305-308.
    • (1999) Bioinformatics , vol.15 , pp. 305-308
    • Gouet, P.1    Courcelle, E.2    Stuart, D.I.3    Metoz, F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.