메뉴 건너뛰기




Volumn 150, Issue 2, 2000, Pages

The Drosophila melanogaster genome: Translation factors and RNA binding proteins

Author keywords

[No Author keywords available]

Indexed keywords

RNA BINDING PROTEIN; TRANSCRIPTION FACTOR;

EID: 0034710226     PISSN: 00219525     EISSN: None     Source Type: Journal    
DOI: 10.1083/jcb.150.2.F51     Document Type: Article
Times cited : (118)

References (47)
  • 2
    • 0029584496 scopus 로고
    • Trinucleotide repeat expansion and human disease
    • Ashley, C.T., and S.T. Warren. 1995. Trinucleotide repeat expansion and human disease. Annu. Rev. Genet. 29:703-728.
    • (1995) Annu. Rev. Genet. , vol.29 , pp. 703-728
    • Ashley, C.T.1    Warren, S.T.2
  • 4
    • 0034697169 scopus 로고    scopus 로고
    • Nuclear export of the DEAD hox An3 protein by CRM1 is coupled to An3 helicase activity
    • Askjaer, P., R. Rosendahl, and J. Kjems. 2000. Nuclear export of the DEAD hox An3 protein by CRM1 is coupled to An3 helicase activity. J. Biol. Chem. 275:11561-11568.
    • (2000) J. Biol. Chem. , vol.275 , pp. 11561-11568
    • Askjaer, P.1    Rosendahl, R.2    Kjems, J.3
  • 5
    • 0027753933 scopus 로고
    • Analysis of the RNA-recognition motif and RS and RGG domains: Conservation in metazoan pre-mRNA splicing factors
    • Birney, E., S. Kumar, and A.R. Krainer. 1993. Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acids Res. 21:5803-5816.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 5803-5816
    • Birney, E.1    Kumar, S.2    Krainer, A.R.3
  • 7
    • 0033499661 scopus 로고    scopus 로고
    • Isolation of an FMRP-associated messenger ribonucleoprotein particle and identification of nucleolin and the fragile X-related proteins as components of the complex
    • Cernan, S., V. Brown, and S.T. Warren. 1999. Isolation of an FMRP-associated messenger ribonucleoprotein particle and identification of nucleolin and the fragile X-related proteins as components of the complex. Mol. Cell. Biol. 19: 7925-7932.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 7925-7932
    • Cernan, S.1    Brown, V.2    Warren, S.T.3
  • 8
    • 0031957283 scopus 로고    scopus 로고
    • Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly
    • Daugeron, M.C., and P. Linder. 1998. Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly. RNA. 4:566-581.
    • (1998) RNA , vol.4 , pp. 566-581
    • Daugeron, M.C.1    Linder, P.2
  • 9
    • 0031697184 scopus 로고    scopus 로고
    • Spb4p, an essential putative RNA helicase, is required for a late step in the assembly of 60S ribosomal subunits in Saccharomyces cerevisiae
    • de la Cruz, J., D. Kressler, M. Rojo, D. Tollervey, and P. Linder. 1998. Spb4p, an essential putative RNA helicase, is required for a late step in the assembly of 60S ribosomal subunits in Saccharomyces cerevisiae. RNA. 10:1268-1281.
    • (1998) RNA , vol.10 , pp. 1268-1281
    • De La Cruz, J.1    Kressler, D.2    Rojo, M.3    Tollervey, D.4    Linder, P.5
  • 10
    • 0032560007 scopus 로고    scopus 로고
    • A highly conserved RNA-binding protein for cytoplasmic mRNA localization in vertebrates
    • Deshler, J.O., M.I. Highett, T. Abramson, and B.J. Schnapp. 1998. A highly conserved RNA-binding protein for cytoplasmic mRNA localization in vertebrates. Curr. Biol. 8:489-496.
    • (1998) Curr. Biol. , vol.8 , pp. 489-496
    • Deshler, J.O.1    Highett, M.I.2    Abramson, T.3    Schnapp, B.J.4
  • 11
    • 0032514925 scopus 로고    scopus 로고
    • The identification of two Drosophila K homology domain proteins. KEP1 and SAM are members of the Sam68 family of GSG domain proteins
    • Di Fruscio, M., T. Chen, S. Bonyadi, P. Lasko, and S. Richard. 1998. The identification of two Drosophila K homology domain proteins. KEP1 and SAM are members of the Sam68 family of GSG domain proteins. J. Biol. Chem. 273:30122-30130.
    • (1998) J. Biol. Chem. , vol.273 , pp. 30122-30130
    • Di Fruscio, M.1    Chen, T.2    Bonyadi, S.3    Lasko, P.4    Richard, S.5
  • 13
    • 0029944722 scopus 로고    scopus 로고
    • The quaking gene product necessary in embryogenesis and myelination combines features of RNA binding and signal transduction proteins
    • Ebersole, T.A., O. Chen, M.J. Justice, and K. Artzt. 1996. The quaking gene product necessary in embryogenesis and myelination combines features of RNA binding and signal transduction proteins. Nat. Genet. 12:260-265.
    • (1996) Nat. Genet. , vol.12 , pp. 260-265
    • Ebersole, T.A.1    Chen, O.2    Justice, M.J.3    Artzt, K.4
  • 14
    • 0000122573 scopus 로고
    • PHYLIP: Phylogeny inference package (version 3.2)
    • Felsenstein, J. 1989. PHYLIP: phylogeny inference package (Version 3.2). Cladistics. 5:164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 15
    • 0031310667 scopus 로고    scopus 로고
    • FMRP associates with polyribosomes as an mRNP, and the 1304N mutation of severe fragile X syndrome abolishes this association
    • Feng, Y., D. Absher, D.E. Eberhart, V. Brown, H. Malter, and S.T. Warren. 1997. FMRP associates with polyribosomes as an mRNP, and the 1304N mutation of severe fragile X syndrome abolishes this association. Mol. Cell. 1:109-118.
    • (1997) Mol. Cell , vol.1 , pp. 109-118
    • Feng, Y.1    Absher, D.2    Eberhart, D.E.3    Brown, V.4    Malter, H.5    Warren, S.T.6
  • 17
    • 0025597055 scopus 로고
    • The CHL1 (CTF1) gene product of Saccharomyces cerevisiae is important for chromosome transmission and normal cell cycle progression in G2/M
    • Gerring, S.L., F. Spencer, and P. Hieter. 1990. The CHL1 (CTF1) gene product of Saccharomyces cerevisiae is important for chromosome transmission and normal cell cycle progression in G2/M. EMBO (Eur. Mol. Biol. Organ.) J. 13:4347-4358.
    • (1990) EMBO (Eur. Mol. Biol. Organ.) J. , vol.13 , pp. 4347-4358
    • Gerring, S.L.1    Spencer, F.2    Hieter, P.3
  • 18
    • 0026089687 scopus 로고
    • The Xenopus localized messenger RNA An3 may encode an ATP-dependent RNA helicase
    • Gururajan, R., H. Perry-O'Keefe, D. A. Melton, and D.L. Weeks. 1991. The Xenopus localized messenger RNA An3 may encode an ATP-dependent RNA helicase. Nature. 349:717-719.
    • (1991) Nature , vol.349 , pp. 717-719
    • Gururajan, R.1    Perry-O'keefe, H.2    Melton, D.A.3    Weeks, D.L.4
  • 20
    • 0029857948 scopus 로고    scopus 로고
    • Genetic interaction of DED1 encoding a putative ATP-dependent RNA helicase with SRM1 encoding a mammalian RCC1 homolog in Saccharomyces cerevisiae
    • Hayashi, N., H. Seino, K. Irie, M. Watanabe, K.L. Clark, K. Matsumoto, and T. Nishimoto. 1996. Genetic interaction of DED1 encoding a putative ATP-dependent RNA helicase with SRM1 encoding a mammalian RCC1 homolog in Saccharomyces cerevisiae. Mol. Gen. Genet. 253:149-156.
    • (1996) Mol. Gen. Genet. , vol.253 , pp. 149-156
    • Hayashi, N.1    Seino, H.2    Irie, K.3    Watanabe, M.4    Clark, K.L.5    Matsumoto, K.6    Nishimoto, T.7
  • 21
    • 0033611157 scopus 로고    scopus 로고
    • RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2α to the assembly of mammalian stress granules
    • Kedersha, N.L., M. Gupta, W. Li, I. Miller, and P. Anderson. 1999. RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2α to the assembly of mammalian stress granules. J. Cell Biol. 147:1431-1441.
    • (1999) J. Cell Biol. , vol.147 , pp. 1431-1441
    • Kedersha, N.L.1    Gupta, M.2    Li, W.3    Miller, I.4    Anderson, P.5
  • 23
    • 0030679565 scopus 로고    scopus 로고
    • Fal1p is an essential DEAD-box protein involved in 40s ribosomal subunit biogenesis in Saccharomyces cerevisiae
    • Kressler, D., J. de la Cruz, M. Rojo, and P. Linder. 1997. Fal1p is an essential DEAD-box protein involved in 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 17:7283-7294.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 7283-7294
    • Kressler, D.1    De La Cruz, J.2    Rojo, M.3    Linder, P.4
  • 24
    • 0033046015 scopus 로고    scopus 로고
    • Evolution of the RECO family of helicases. A Drosophila homolog, dmblm, is similar to the human Bloom syndrome gene
    • Kusano, K., M.E. Berres, and W.R. Engels. 1999. Evolution of the RECO family of helicases. A Drosophila homolog, dmblm, is similar to the human Bloom syndrome gene. Genetics 151:1027-1039.
    • (1999) Genetics , vol.151 , pp. 1027-1039
    • Kusano, K.1    Berres, M.E.2    Engels, W.R.3
  • 25
    • 0030037453 scopus 로고    scopus 로고
    • Alternatively spliced transcrips from the Drosophila eIF4E gene produce two different cap-binding proteins
    • Lavoie, C.A., P.E.D. Lachance, N. Sonenberg, and P. Lasko. 1996. Alternatively spliced transcrips from the Drosophila eIF4E gene produce two different cap-binding proteins. J. Biol. Chem. 271:16393-16398.
    • (1996) J. Biol. Chem. , vol.271 , pp. 16393-16398
    • Lavoie, C.A.1    Lachance, P.E.D.2    Sonenberg, N.3    Lasko, P.4
  • 26
    • 0034603208 scopus 로고    scopus 로고
    • Sequence-specific RNA binding by a Nova KH domain: Implications for paraneoplastic disease and the fragile X syndrome
    • Lewis, H.A., K. Musunuru, K.B. Jensen, C. Edo, H. Chen, R.B. Darnell, and S.K. Burley. 2000. Sequence-specific RNA binding by a Nova KH domain: implications for paraneoplastic disease and the fragile X syndrome. Cell. 100:323-332.
    • (2000) Cell , vol.100 , pp. 323-332
    • Lewis, H.A.1    Musunuru, K.2    Jensen, K.B.3    Edo, C.4    Chen, H.5    Darnell, R.B.6    Burley, S.K.7
  • 27
    • 0032190621 scopus 로고    scopus 로고
    • The HIV-1 Tat cellular coactivator Tat-SF1 is a general transcription elongation factor
    • Li, X.Y., and M.R. Green. 1998. The HIV-1 Tat cellular coactivator Tat-SF1 is a general transcription elongation factor. Genes Dev. 12:2992-2996.
    • (1998) Genes Dev. , vol.12 , pp. 2992-2996
    • Li, X.Y.1    Green, M.R.2
  • 28
    • 0029760875 scopus 로고    scopus 로고
    • A DEAD-box-family protein is required for nucleocytoplasmic transport of yeast mRNA
    • Liang, S., M. Hitomi, Y.H. Hu, Y. Liu, and A.M. Tartakoff. 1996. A DEAD-box-family protein is required for nucleocytoplasmic transport of yeast mRNA. Mol. Cell. Biol. 16:5139-5146.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 5139-5146
    • Liang, S.1    Hitomi, M.2    Hu, Y.H.3    Liu, Y.4    Tartakoff, A.M.5
  • 29
    • 0032938811 scopus 로고    scopus 로고
    • Apontic binds the translational repressor Bruno and is implicated in regulation of oskar mRNA translation
    • Lie, Y.S., and P.M. Macdonald. 1999. Apontic binds the translational repressor Bruno and is implicated in regulation of oskar mRNA translation. Development. 126:1139-1148.
    • (1999) Development , vol.126 , pp. 1139-1148
    • Lie, Y.S.1    Macdonald, P.M.2
  • 30
    • 0030728936 scopus 로고    scopus 로고
    • Cocrystal structure of the messenger RNA 5′ cap-binding protein (eIF4E) bound to 7-methyl-GDP
    • Marcotrigiano, J., A.-C. Gingras, N. Sonenberg, and S.K. Burley. 1997. Cocrystal structure of the messenger RNA 5′ cap-binding protein (eIF4E) bound to 7-methyl-GDP. Cell. 89:951-961.
    • (1997) Cell , vol.89 , pp. 951-961
    • Marcotrigiano, J.1    Gingras, A.-C.2    Sonenberg, N.3    Burley, S.K.4
  • 31
    • 0033152072 scopus 로고    scopus 로고
    • Capdependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G
    • Marcotrigiano, J., A.-C. Gingras, N. Sonenberg, and S.K. Burley. 1999. Capdependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G. Mol. Cell. 3:707-716.
    • (1999) Mol. Cell , vol.3 , pp. 707-716
    • Marcotrigiano, J.1    Gingras, A.-C.2    Sonenberg, N.3    Burley, S.K.4
  • 32
    • 0026443247 scopus 로고
    • A Drosophila model for xeroderma pigmentosum and Cockayne's syndrome: Haywire encodes the fly homolog of ERCC3, a human excision repair gene
    • Mounkes, L.C., R.S. Jones, B.C. Liang, W. Gelbart, and M.T. Fuller. 1992. A Drosophila model for xeroderma pigmentosum and Cockayne's syndrome: haywire encodes the fly homolog of ERCC3, a human excision repair gene. Cell. 71:925-937.
    • (1992) Cell , vol.71 , pp. 925-937
    • Mounkes, L.C.1    Jones, R.S.2    Liang, B.C.3    Gelbart, W.4    Fuller, M.T.5
  • 33
    • 0034710240 scopus 로고    scopus 로고
    • Pre-messenger RNA processing factors in the Drosophila melanogaster genome
    • Mount, S., and H. Salz. 2000. Pre-messenger RNA processing factors in the Drosophila melanogaster genome. J. Cell Biol. 150:F37-F43.
    • (2000) J. Cell Biol. , vol.150
    • Mount, S.1    Salz, H.2
  • 34
    • 0033213391 scopus 로고    scopus 로고
    • The balance between two isoforms of the Drosophila RNA-binding protein how controls tendon cell differentiation
    • Nabel-Rosen, H., N. Dorevitch, A. Reuveny, and T. Volk. 1999. The balance between two isoforms of the Drosophila RNA-binding protein How controls tendon cell differentiation. Mol. Cell. 4:573-584.
    • (1999) Mol. Cell. , vol.4 , pp. 573-584
    • Nabel-Rosen, H.1    Dorevitch, N.2    Reuveny, A.3    Volk, T.4
  • 35
    • 0033118337 scopus 로고    scopus 로고
    • Sequence interval within the PEST motif of Bicoid is important for translational repression of caudal mRNA in the anterior region of the Drosophila embryo
    • Niessing, D., N. Dostatni, H. Jäckle, and R. Rivera-Pomar. 1999. Sequence interval within the PEST motif of Bicoid is important for translational repression of caudal mRNA in the anterior region of the Drosophila embryo. EMBO (Eur. Mol. Biol. Organ.) J. 18:1966-1973.
    • (1999) EMBO (Eur. Mol. Biol. Organ.) J. , vol.18 , pp. 1966-1973
    • Niessing, D.1    Dostatni, N.2    Jäckle, H.3    Rivera-Pomar, R.4
  • 36
    • 0029736818 scopus 로고    scopus 로고
    • 18S rRNA processing requires the RNA helicase-like protein Rrp3
    • O'Day, C.L., F. Chavanikamannil, and J. Abelson. 1996. 18S rRNA processing requires the RNA helicase-like protein Rrp3. Nucleic Acids Res. 24:3201-3207.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3201-3207
    • O'Day, C.L.1    Chavanikamannil, F.2    Abelson, J.3
  • 38
    • 0032908820 scopus 로고    scopus 로고
    • The Drosophila melanogaster homolog of the Xeroderma pigmentosum D gene product is located in euchromatic regions and has a dynamic response to UV light-induced lesions in polytene chromosomes
    • Reynaud, E., H. Lomeli, M. Vazquez, and M. Zurita. 1999. The Drosophila melanogaster homolog of the Xeroderma pigmentosum D gene product is located in euchromatic regions and has a dynamic response to UV light-induced lesions in polytene chromosomes. Mol. Biol. Cell. 10:1191-1203.
    • (1999) Mol. Biol. Cell. , vol.10 , pp. 1191-1203
    • Reynaud, E.1    Lomeli, H.2    Vazquez, M.3    Zurita, M.4
  • 39
    • 0026470789 scopus 로고
    • A putative ATP-dependent RNA helicase involved in Saccharomyces cerevisiae ribosome assembly
    • Ripmaster, T.L., G.P. Vaughn, and J.L. Woolford, Jr. 1992. A putative ATP-dependent RNA helicase involved in Saccharomyces cerevisiae ribosome assembly. Proc. Natl. Acad. Sci. USA. 89:11131-11135.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 11131-11135
    • Ripmaster, T.L.1    Vaughn, G.P.2    Woolford J.L., Jr.3
  • 42
    • 0032560478 scopus 로고    scopus 로고
    • A member of the Ran-binding protein family, Yrb2p, is involved in nuclear protein export
    • Taura, T., H. Krebber, and P.A. Silver. 1998. A member of the Ran-binding protein family, Yrb2p, is involved in nuclear protein export. Proc. Natl. Acad. Sci. USA. 95:7427-7432.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 7427-7432
    • Taura, T.1    Krebber, H.2    Silver, P.A.3
  • 43
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., D.G. Higgins, and T.J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 45
    • 13144293035 scopus 로고    scopus 로고
    • The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen largeted in POMA patients with dementia
    • Yang, Y.Y., G.L. Yin, and R.B. Darnell. 1998. The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen largeted in POMA patients with dementia. Proc. Natl. Acad. Sci. USA. 95:13254-13259.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 13254-13259
    • Yang, Y.Y.1    Yin, G.L.2    Darnell, R.B.3
  • 46
    • 0033052048 scopus 로고    scopus 로고
    • A double-stranded RNA binding protein required for activation of repressed messages in mammalian germ cells
    • Zhong, J., A.H. Peters, K. Lee, and R.E. Braun. 1999. A double-stranded RNA binding protein required for activation of repressed messages in mammalian germ cells. Nat. Genet. 22:171-174.
    • (1999) Nat. Genet. , vol.22 , pp. 171-174
    • Zhong, J.1    Peters, A.H.2    Lee, K.3    Braun, R.E.4
  • 47
    • 0029834383 scopus 로고    scopus 로고
    • Tat-SF1: Cofactor for stimulation of transcriptional elongation by HIV-1 Tat
    • Zhou, Q., and P.A. Sharp. 1996. Tat-SF1: cofactor for stimulation of transcriptional elongation by HIV-1 Tat. Science. 274:605-610.
    • (1996) Science , vol.274 , pp. 605-610
    • Zhou, Q.1    Sharp, P.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.