-
1
-
-
0038061486
-
Ligand binding energy and catalytic efficiency from improved packing within receptors and enzymes
-
Williams D.H., Stephens E., Zhou M. Ligand binding energy and catalytic efficiency from improved packing within receptors and enzymes. J. Mol. Biol. 329:2003;389-399
-
(2003)
J. Mol. Biol.
, vol.329
, pp. 389-399
-
-
Williams, D.H.1
Stephens, E.2
Zhou, M.3
-
2
-
-
0033819339
-
Immucillin-H binding to purine nucleoside phosphorylase reduces dynamic solvent exchange
-
Wang F., Miles R.W., Kicsa G., Nieves E., Schramm V.I., Angeletti R.H. Immucillin-H binding to purine nucleoside phosphorylase reduces dynamic solvent exchange. Protein Sci. 9:2000;1660-1668
-
(2000)
Protein Sci.
, vol.9
, pp. 1660-1668
-
-
Wang, F.1
Miles, R.W.2
Kicsa, G.3
Nieves, E.4
Schramm, V.I.5
Angeletti, R.H.6
-
3
-
-
0035838469
-
A transition-state analogue reduces protein dynamics in hypoxanthine-guanine phosphoribosyltransferase
-
Wang F., Shi W., Nieves E., Angeletti R.H., Schramm V.L., Grubmeyer C. A transition-state analogue reduces protein dynamics in hypoxanthine-guanine phosphoribosyltransferase. Biochemistry. 40:2001;8043-8054
-
(2001)
Biochemistry
, vol.40
, pp. 8043-8054
-
-
Wang, F.1
Shi, W.2
Nieves, E.3
Angeletti, R.H.4
Schramm, V.L.5
Grubmeyer, C.6
-
4
-
-
0032453619
-
Effect of peptide binding on amide proton exchange rates in the PDZ2 domain from human phosphatase hPT1E
-
Ekiel I., Banville D., Shen S.H., Gehring K. Effect of peptide binding on amide proton exchange rates in the PDZ2 domain from human phosphatase hPT1E. Biochem. Cell Biol. 76:1998;334-340
-
(1998)
Biochem. Cell Biol.
, vol.76
, pp. 334-340
-
-
Ekiel, I.1
Banville, D.2
Shen, S.H.3
Gehring, K.4
-
5
-
-
0035798419
-
The role of backbone motions in ligand binding to the c-Src SH3 domain
-
Wang C., Pawley N.H., Nicholson L.K. The role of backbone motions in ligand binding to the c-Src SH3 domain. J. Mol. Biol. 313:2001;873-887
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 873-887
-
-
Wang, C.1
Pawley, N.H.2
Nicholson, L.K.3
-
6
-
-
0033551496
-
Hydrogen exchange shows peptide binding stabilizes motions in Hck SH2
-
Engen J.R., Gmeiner W.H., Smithgall T.E., Smith D.L. Hydrogen exchange shows peptide binding stabilizes motions in Hck SH2. Biochemistry. 38:1999;8926-8935
-
(1999)
Biochemistry
, vol.38
, pp. 8926-8935
-
-
Engen, J.R.1
Gmeiner, W.H.2
Smithgall, T.E.3
Smith, D.L.4
-
7
-
-
0037824632
-
Indirect assessment of small hydrophobic ligand binding to a model protein using a combination of ESI MS and HDX/ESI MS
-
Xiao H., Kaltashov I.A., Eyles S.J. Indirect assessment of small hydrophobic ligand binding to a model protein using a combination of ESI MS and HDX/ESI MS. J. Am. Soc. Mass Spectrom. 14:2003;506-515
-
(2003)
J. Am. Soc. Mass Spectrom.
, vol.14
, pp. 506-515
-
-
Xiao, H.1
Kaltashov, I.A.2
Eyles, S.J.3
-
8
-
-
0032545193
-
Energetic components of the allosteric machinery in hemoglobin measured by hydrogen exchange
-
Englander J.J., Louie G., McKinnie R.E., Englander S.W. Energetic components of the allosteric machinery in hemoglobin measured by hydrogen exchange. J. Mol. Biol. 284:1998;1695-1706
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 1695-1706
-
-
Englander, J.J.1
Louie, G.2
McKinnie, R.E.3
Englander, S.W.4
-
9
-
-
0032076269
-
An analysis of the origins of a cooperative binding energy of dimerization
-
Williams D.H., Maguire A.J., Tsuzuki W., Westwell M.S. An analysis of the origins of a cooperative binding energy of dimerization. Science. 280:1998;711-714
-
(1998)
Science
, vol.280
, pp. 711-714
-
-
Williams, D.H.1
Maguire, A.J.2
Tsuzuki, W.3
Westwell, M.S.4
-
10
-
-
0000635348
-
The relationship between amide proton chemical shifts and secondary structure in proteins
-
Asakura T., Taoka K., Demura M., Williamson M.P. The relationship between amide proton chemical shifts and secondary structure in proteins. J. Biomed. NMR. 6:1995;227-236
-
(1995)
J. Biomed. NMR
, vol.6
, pp. 227-236
-
-
Asakura, T.1
Taoka, K.2
Demura, M.3
Williamson, M.P.4
-
11
-
-
33845552240
-
Hydrogen bond length and proton NMR chemical shifts in proteins
-
Wagner G., Pardi A., Wuthrich K. Hydrogen bond length and proton NMR chemical shifts in proteins. J. Am. Chem. Soc. 105:1983;5948-5949
-
(1983)
J. Am. Chem. Soc.
, vol.105
, pp. 5948-5949
-
-
Wagner, G.1
Pardi, A.2
Wuthrich, K.3
-
12
-
-
0026410969
-
Relationship between nuclear-magnetic-resonance chemical-shift and protein secondary structure
-
Wishart D.S., Sykes B.D., Richards F.M. Relationship between nuclear-magnetic-resonance chemical-shift and protein secondary structure. J. Mol. Biol. 222:1991;311-333
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 311-333
-
-
Wishart, D.S.1
Sykes, B.D.2
Richards, F.M.3
-
13
-
-
0034801468
-
An enthalpic component in cooperativity: The relationship between enthalpy, entropy, and non-covalent structure in weak interactions
-
Calderone C.T., Williams D.H. An enthalpic component in cooperativity: the relationship between enthalpy, entropy, and non-covalent structure in weak interactions. J. Am. Chem. Soc. 123:2001;6262-6267
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 6262-6267
-
-
Calderone, C.T.1
Williams, D.H.2
-
14
-
-
33748600422
-
Thermodynamics and kinetics of dissociation of ligand-induced dimers of vancomycin antiobiotics
-
McPhail D., Cooper A. Thermodynamics and kinetics of dissociation of ligand-induced dimers of vancomycin antiobiotics. J. Chem. Soc. Faraday Trans. 93:1997;2283-2289
-
(1997)
J. Chem. Soc. Faraday Trans.
, vol.93
, pp. 2283-2289
-
-
McPhail, D.1
Cooper, A.2
-
16
-
-
78651189765
-
On the nature of allosteric transitions: A plausible model
-
Monod J., Wyman J., Changeux J.-P. On the nature of allosteric transitions: a plausible model. J. Mol. Biol. 12:1965;88-118
-
(1965)
J. Mol. Biol.
, vol.12
, pp. 88-118
-
-
Monod, J.1
Wyman, J.2
Changeux, J.-P.3
-
17
-
-
0034868445
-
NMR relaxation studies of the role of conformational entropy in protein stability and ligand binding
-
Stone M.J. NMR relaxation studies of the role of conformational entropy in protein stability and ligand binding. Accts Chem. Res. 34:2001;379-388
-
(2001)
Accts Chem. Res.
, vol.34
, pp. 379-388
-
-
Stone, M.J.1
-
19
-
-
0037470616
-
Increased backbone mobility in beta-barrel enhances entropy gain driving binding of N-TIMP-1 to MMP-3
-
Arumugam S., Gao G.H., Semenchenko V., Brew K., van Doren S.R. Increased backbone mobility in beta-barrel enhances entropy gain driving binding of N-TIMP-1 to MMP-3. J. Mol. Biol. 327:2003;719-734
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 719-734
-
-
Arumugam, S.1
Gao, G.H.2
Semenchenko, V.3
Brew, K.4
Van Doren, S.R.5
-
20
-
-
0032710610
-
Increased protein backbone conformational entropy upon hydrophobic ligand binding
-
Zídek L., Novotny M.V., Stone M.J. Increased protein backbone conformational entropy upon hydrophobic ligand binding. Nature Struct. Biol. 6:1999;1118-1121
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 1118-1121
-
-
Zídek, L.1
Novotny, M.V.2
Stone, M.J.3
-
21
-
-
0029395478
-
Win some, lose some: Enthalpy-entropy compensation in weak intermolecular interactions
-
Dunitz J.D. Win some, lose some: enthalpy-entropy compensation in weak intermolecular interactions. Chem. Biol. 2:1995;709-712
-
(1995)
Chem. Biol.
, vol.2
, pp. 709-712
-
-
Dunitz, J.D.1
-
22
-
-
37049088193
-
Application of a generalised enthalpy-entropy relationship to binding co-operativity and weak association in solution
-
Searle M.S., Westwell M.S., Williams D.H. Application of a generalised enthalpy-entropy relationship to binding co-operativity and weak association in solution. J. Chem. Soc. Perkin Trans. 2. 1995;141-151
-
(1995)
J. Chem. Soc. Perkin Trans. 2
, pp. 141-151
-
-
Searle, M.S.1
Westwell, M.S.2
Williams, D.H.3
-
23
-
-
0027213193
-
On the stability of nucleic-acid structures in solution - Enthalpy-entropy compensations, internal rotations and reversibility
-
Searle M.S., Williams D.H. On the stability of nucleic-acid structures in solution - enthalpy-entropy compensations, internal rotations and reversibility. Nucl. Acids Res. 21:1993;2051-2056
-
(1993)
Nucl. Acids Res.
, vol.21
, pp. 2051-2056
-
-
Searle, M.S.1
Williams, D.H.2
-
24
-
-
0000592009
-
Succesful predictions of the residual motion of weakly associated states as a function of the bonding between them
-
Westwell M.S., Searle M.S., Klein J., Williams D.H. Succesful predictions of the residual motion of weakly associated states as a function of the bonding between them. J. Phys. Chem. 100:1996;16000-16001
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 16000-16001
-
-
Westwell, M.S.1
Searle, M.S.2
Klein, J.3
Williams, D.H.4
-
25
-
-
0028500779
-
A short linear peptide that folds into a native stable β-hairpin in aqueous solution
-
Blanco F.J., Rivas G., Serrano L. A short linear peptide that folds into a native stable β-hairpin in aqueous solution. Nature Struct. Biol. 1:1994;584-590
-
(1994)
Nature Struct. Biol.
, vol.1
, pp. 584-590
-
-
Blanco, F.J.1
Rivas, G.2
Serrano, L.3
-
26
-
-
0024293204
-
Conformation of peptide fragments of proteins in aqueous solution: Implications for initiation of protein folding
-
Wright P.E., Dyson H.J., Lerner R.A. Conformation of peptide fragments of proteins in aqueous solution: implications for initiation of protein folding. Biochemistry. 27:1988;7167-7175
-
(1988)
Biochemistry
, vol.27
, pp. 7167-7175
-
-
Wright, P.E.1
Dyson, H.J.2
Lerner, R.A.3
-
27
-
-
2942579023
-
Phase transitions in multimolecular layers of adsorbed nitrogen
-
Morrison J.A., Drain L.E., Dugdale J.S. Phase transitions in multimolecular layers of adsorbed nitrogen. Can. J. Chem. 30:1952;890-903
-
(1952)
Can. J. Chem.
, vol.30
, pp. 890-903
-
-
Morrison, J.A.1
Drain, L.E.2
Dugdale, J.S.3
-
28
-
-
0001623810
-
Tyrosine hydroxylase binds tetrahydrobiopterin cofactor with negative cooperativity, as shown by kinetic analyses and surface plasmon resonance detection
-
Flatmark T., Almas B., Knappskog P.M., Berge S.V., Svebak R.M., Chehin R., et al. Tyrosine hydroxylase binds tetrahydrobiopterin cofactor with negative cooperativity, as shown by kinetic analyses and surface plasmon resonance detection. Eur. J. Biochem. 262:1999;840-849
-
(1999)
Eur. J. Biochem.
, vol.262
, pp. 840-849
-
-
Flatmark, T.1
Almas, B.2
Knappskog, P.M.3
Berge, S.V.4
Svebak, R.M.5
Chehin, R.6
-
29
-
-
0345099650
-
Cooperativity, partially bound states, and enthalpy-entropy compensation
-
Hunter C.A., Tomas S. Cooperativity, partially bound states, and enthalpy-entropy compensation. Chem. Biol. 10:2003;1023-1032
-
(2003)
Chem. Biol.
, vol.10
, pp. 1023-1032
-
-
Hunter, C.A.1
Tomas, S.2
-
30
-
-
33751157207
-
Enthalpy-entropy compensation in drug-receptor binding
-
Gilli P., Ferretti V., Gilli G., Borea P.A. Enthalpy-entropy compensation in drug-receptor binding. J. Phys. Chem. 98:1994;1515-1518
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 1515-1518
-
-
Gilli, P.1
Ferretti, V.2
Gilli, G.3
Borea, P.A.4
-
31
-
-
0028454828
-
The development of a simple scoring function to estimate the binding constant for a protein ligand complex of known 3-dimensional structure
-
Böhm H.-J. The development of a simple scoring function to estimate the binding constant for a protein ligand complex of known 3-dimensional structure. J. Comput. Aided Mol. Des. 8:1994;243-256
-
(1994)
J. Comput. Aided Mol. Des.
, vol.8
, pp. 243-256
-
-
Böhm, H.-J.1
-
32
-
-
0025886180
-
Towards the semi-quantitative estimation of binding constants. Guides for peptide-peptide binding in aqueous solution
-
Williams D.H., Cox J.P.L., Doig A.J., Gardner M., Gerhard U., Kaye P., et al. Towards the semi-quantitative estimation of binding constants. Guides for peptide-peptide binding in aqueous solution. J. Am. Chem. Soc. 113:1991;7020-7030
-
(1991)
J. Am. Chem. Soc.
, vol.113
, pp. 7020-7030
-
-
Williams, D.H.1
Cox, J.P.L.2
Doig, A.J.3
Gardner, M.4
Gerhard, U.5
Kaye, P.6
-
33
-
-
0001843048
-
Search for a realistic view of hydrophobic effects
-
Muller N. Search for a realistic view of hydrophobic effects. Accts Chem. Res. 23:1990;23-28
-
(1990)
Accts Chem. Res.
, vol.23
, pp. 23-28
-
-
Muller, N.1
-
34
-
-
33646195474
-
The hydrogen-bond in molecular recognition
-
Fersht A.R. The hydrogen-bond in molecular recognition. Trends Biochem. Sci. 12:1987;301-304
-
(1987)
Trends Biochem. Sci.
, vol.12
, pp. 301-304
-
-
Fersht, A.R.1
-
36
-
-
0035368723
-
Allosteric mechanisms in normal and pathological nicotinic acetylcholine receptors
-
Changeux J.-P., Edelstein S.J. Allosteric mechanisms in normal and pathological nicotinic acetylcholine receptors. Curr. Opin. Neurobiol. 11:2001;369-377
-
(2001)
Curr. Opin. Neurobiol.
, vol.11
, pp. 369-377
-
-
Changeux, J.-P.1
Edelstein, S.J.2
-
37
-
-
0031819840
-
Receptor binding thermodynamics as a tool for linking drug efficacy and affinity
-
Borea P.R., Varani K., Gessi S., Gilli P., Dalpiaz A. Receptor binding thermodynamics as a tool for linking drug efficacy and affinity. Il Farmaco. 53:1998;249-254
-
(1998)
Il Farmaco
, vol.53
, pp. 249-254
-
-
Borea, P.R.1
Varani, K.2
Gessi, S.3
Gilli, P.4
Dalpiaz, A.5
-
38
-
-
0034571319
-
Can thermodynamic measurements of receptor binding yield information on drug affinity and efficacy?
-
Borea P.A., Dalpiaz A., Varani K., Gilli P., Gilli G. Can thermodynamic measurements of receptor binding yield information on drug affinity and efficacy? Biochem. Pharmacol. 60:2000;1549-1556
-
(2000)
Biochem. Pharmacol.
, vol.60
, pp. 1549-1556
-
-
Borea, P.A.1
Dalpiaz, A.2
Varani, K.3
Gilli, P.4
Gilli, G.5
-
39
-
-
0034492374
-
Homo-oligomeric complexes of the yeast alpha-factor pheromone receptor are functional units of endocytosis
-
Yesilaltay A., Jenness D.D. Homo-oligomeric complexes of the yeast alpha-factor pheromone receptor are functional units of endocytosis. Mol. Biol. Cell. 11:2000;2873-2884
-
(2000)
Mol. Biol. Cell
, vol.11
, pp. 2873-2884
-
-
Yesilaltay, A.1
Jenness, D.D.2
-
40
-
-
0037160035
-
Ligand-dependent inhibition of oligomerization at the human thyrotropin receptor
-
Latif R., Graves P., Davies T.F. Ligand-dependent inhibition of oligomerization at the human thyrotropin receptor. J. Biol. Chem. 277:2002;45059-45067
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 45059-45067
-
-
Latif, R.1
Graves, P.2
Davies, T.F.3
-
41
-
-
0037011939
-
Inter-receptor communication through arrays of bacterial chemoreceptors
-
Gestwicki J.E., Kiessling L.L. Inter-receptor communication through arrays of bacterial chemoreceptors. Nature. 415:2002;81-84
-
(2002)
Nature
, vol.415
, pp. 81-84
-
-
Gestwicki, J.E.1
Kiessling, L.L.2
-
42
-
-
0032492852
-
Receptor clustering as a cellular mechanism to control sensitivity
-
Bray D., Levin M.D., Morton-Firth C.J. Receptor clustering as a cellular mechanism to control sensitivity. Nature. 393:1998;85-88
-
(1998)
Nature
, vol.393
, pp. 85-88
-
-
Bray, D.1
Levin, M.D.2
Morton-Firth, C.J.3
-
43
-
-
0015797384
-
Chemotaxis towards sugars in Escherichia coli
-
Adler J., Hazelbauer G.L., Dahl M.M. Chemotaxis towards sugars in Escherichia coli. J. Bacteriol. 115:1973;824-847
-
(1973)
J. Bacteriol.
, vol.115
, pp. 824-847
-
-
Adler, J.1
Hazelbauer, G.L.2
Dahl, M.M.3
-
44
-
-
0015845216
-
The range of attractant concentrations for bacterial chemotaxis and the threshold and size over this range
-
Mesibov R., Ordal G.W., Adler J. The range of attractant concentrations for bacterial chemotaxis and the threshold and size over this range. J. Gen. Physiol. 62:1973;203-223
-
(1973)
J. Gen. Physiol.
, vol.62
, pp. 203-223
-
-
Mesibov, R.1
Ordal, G.W.2
Adler, J.3
-
45
-
-
0036174608
-
Dimerization: An emerging concept for G protein-coupled receptor ontogeny and function
-
Angers S., Salahpour A., Bouvier M. Dimerization: an emerging concept for G protein-coupled receptor ontogeny and function. Annu. Rev. Pharmacol. Toxicol. 42:2002;409-435
-
(2002)
Annu. Rev. Pharmacol. Toxicol.
, vol.42
, pp. 409-435
-
-
Angers, S.1
Salahpour, A.2
Bouvier, M.3
-
47
-
-
0036780743
-
G-protein-coupled receptor oligomerization and its potential for drug discovery
-
George S.R., O'Dowd B.F., Lee S.R. G-protein-coupled receptor oligomerization and its potential for drug discovery. Nature Rev. Drug Discov. 1:2002;808-820
-
(2002)
Nature Rev. Drug Discov.
, vol.1
, pp. 808-820
-
-
George, S.R.1
O'Dowd, B.F.2
Lee, S.R.3
-
48
-
-
0033578005
-
G-protein-coupled receptor heterodimerization modulates receptor function
-
Jordan B.A., Devi L.A. G-protein-coupled receptor heterodimerization modulates receptor function. Nature. 399:1999;697-700
-
(1999)
Nature
, vol.399
, pp. 697-700
-
-
Jordan, B.A.1
Devi, L.A.2
-
49
-
-
0029666267
-
A peptide derived from a β2-adrenergic receptor transmembrane domain inhibits both receptor dimerization and activation
-
Hebert T.E., Moffett S., Morello J.P., Loisel T.P., Bichet D.G., Barret C. A peptide derived from a β2-adrenergic receptor transmembrane domain inhibits both receptor dimerization and activation. J. Biol. Chem. 271:1996;16384-16392
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 16384-16392
-
-
Hebert, T.E.1
Moffett, S.2
Morello, J.P.3
Loisel, T.P.4
Bichet, D.G.5
Barret, C.6
-
50
-
-
0017190266
-
Negative cooperativity among beta-adrenergic receptors in frog erythrocyte membranes
-
Limbird L.E., Lefkowitz R.J. Negative cooperativity among beta-adrenergic receptors in frog erythrocyte membranes. J. Biol. Chem. 251:1976;5007-5014
-
(1976)
J. Biol. Chem.
, vol.251
, pp. 5007-5014
-
-
Limbird, L.E.1
Lefkowitz, R.J.2
-
51
-
-
0028979463
-
Binding thermodynamics of adenosine A(2A) receptor ligands
-
Borea P.A., Dalpiaz A., Varani K., Guerra L., Gilli G. Binding thermodynamics of adenosine A(2A) receptor ligands. Biochem. Pharm. 49:1995;461-469
-
(1995)
Biochem. Pharm.
, vol.49
, pp. 461-469
-
-
Borea, P.A.1
Dalpiaz, A.2
Varani, K.3
Guerra, L.4
Gilli, G.5
-
52
-
-
0030760634
-
Dimerization of the δ opioid receptor: Implication for a role in receptor internalization
-
Cvejic S., Devi L.A. Dimerization of the δ opioid receptor: implication for a role in receptor internalization. J. Biol. Chem. 272:1997;26959-26964
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 26959-26964
-
-
Cvejic, S.1
Devi, L.A.2
-
53
-
-
0036884106
-
Hydrogen/deuterium exchange of hydrophobic peptides in model membranes by electrospray ionization mass spectrometry
-
Hansen R.K., Broadhurst R.W., Skelton P.C., Arkin I.T. Hydrogen/deuterium exchange of hydrophobic peptides in model membranes by electrospray ionization mass spectrometry. J. Am. Soc. Mass Spectrom. 13:2002;1376-1387
-
(2002)
J. Am. Soc. Mass Spectrom.
, vol.13
, pp. 1376-1387
-
-
Hansen, R.K.1
Broadhurst, R.W.2
Skelton, P.C.3
Arkin, I.T.4
|