-
2
-
-
0033953284
-
The STAS domain - A link between anion transporters and antisigma-factor antagonists
-
Aravind, L., and Koonin, E.V. 2000. The STAS domain - a link between anion transporters and antisigma-factor antagonists. Curr Biol 10:R53-R55.
-
(2000)
Curr Biol
, vol.10
-
-
Aravind, L.1
Koonin, E.V.2
-
3
-
-
0030712081
-
The GAF domain: An evolutionary link between diverse phototransducing proteins
-
Aravind, L., and Ponting, C.P. 1997. The GAF domain: an evolutionary link between diverse phototransducing proteins. Trends Biochem Sci 22:458-459.
-
(1997)
Trends Biochem Sci
, vol.22
, pp. 458-459
-
-
Aravind, L.1
Ponting, C.P.2
-
4
-
-
0029954661
-
The protein phosphatase 2C (PP2C) superfamily: Detection of bacterial homologues
-
Bork, P., Brown, N.P., Hegyi, H., and Schultz, J. 1996. The protein phosphatase 2C (PP2C) superfamily: detection of bacterial homologues. Protein Sci 5:1421-1425.
-
(1996)
Protein Sci
, vol.5
, pp. 1421-1425
-
-
Bork, P.1
Brown, N.P.2
Hegyi, H.3
Schultz, J.4
-
5
-
-
0141677745
-
A supramolecular complex in the environmental stress signalling pathway of Bacillus subtilis
-
Chen, C.-C., Lewis, R.J., Harris, R., Yudkin, M.D., and Delumeau, O. 2003. A supramolecular complex in the environmental stress signalling pathway of Bacillus subtilis. Mol Microbiol 49:1657-1669.
-
(2003)
Mol Microbiol
, vol.49
, pp. 1657-1669
-
-
Chen, C.-C.1
Lewis, R.J.2
Harris, R.3
Yudkin, M.D.4
Delumeau, O.5
-
6
-
-
4944229440
-
Phosphorylation and RsbX-dependent dephosphorylation of RsbR in the RsbR-RsbS complex of Bacillus subtilis
-
Chen, C.-C., Yudkin, M.D., and Delumeau, O. 2004. Phosphorylation and RsbX-dependent dephosphorylation of RsbR in the RsbR-RsbS complex of Bacillus subtilis. J Bacteriol 186:6830-6836.
-
(2004)
J Bacteriol
, vol.186
, pp. 6830-6836
-
-
Chen, C.-C.1
Yudkin, M.D.2
Delumeau, O.3
-
7
-
-
0037435618
-
The LOV domain family: Photoresponsive signalling modules coupled to diverse output domains
-
Crosson, S., Rajagopal, S., and Moffat, K. 2003. The LOV domain family: photoresponsive signalling modules coupled to diverse output domains. Biochemistry 42:2-10.
-
(2003)
Biochemistry
, vol.42
, pp. 2-10
-
-
Crosson, S.1
Rajagopal, S.2
Moffat, K.3
-
8
-
-
4444250897
-
Cyclic di-GMP as a bacterial second messenger
-
D'Argenio, D.A., and Miller, S.I. 2004. Cyclic di-GMP as a bacterial second messenger. Microbiology 150:2497-2502.
-
(2004)
Microbiology
, vol.150
, pp. 2497-2502
-
-
D'Argenio, D.A.1
Miller, S.I.2
-
10
-
-
4644273104
-
Functional and structural characterization of RsbU, a stress signalling protein phosphatase 2C
-
Delumeau, O., Dutta, S., Brigulla, M., Kuhnke, G., Hardwick, S.W., Völker, U., Yudkin, M.D., and Lewis, R.J. 2004. Functional and structural characterization of RsbU, a stress signalling protein phosphatase 2C. J Biol Chem 279:40927-40937.
-
(2004)
J Biol Chem
, vol.279
, pp. 40927-40937
-
-
Delumeau, O.1
Dutta, S.2
Brigulla, M.3
Kuhnke, G.4
Hardwick, S.W.5
Völker, U.6
Yudkin, M.D.7
Lewis, R.J.8
-
11
-
-
0028299026
-
Interactions between a Bacillus subtilis anti-sigma factor (RsbW) and its antagonist (RsbV)
-
Dufour, A., and Haldenwang, W.G. 1994. Interactions between a Bacillus subtilis anti-sigma factor (RsbW) and its antagonist (RsbV). J Bacteriol 176:1813-1820.
-
(1994)
J Bacteriol
, vol.176
, pp. 1813-1820
-
-
Dufour, A.1
Haldenwang, W.G.2
-
12
-
-
0033985080
-
GHKL, an emerging ATPase/kinase superfamily
-
Dutta, R., and Inouye, M. 2000. GHKL, an emerging ATPase/kinase superfamily. Trends Biochem Sci 25:24-28.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 24-28
-
-
Dutta, R.1
Inouye, M.2
-
13
-
-
0141761124
-
The diversity of globin-coupled sensors
-
Freitas, T.A.K., Hou, S. and Alam, M. 2003. The diversity of globin-coupled sensors. FEBS Lett 552:99-104.
-
(2003)
FEBS Lett
, vol.552
, pp. 99-104
-
-
Freitas, T.A.K.1
Hou, S.2
Alam, M.3
-
14
-
-
0033597177
-
Threonine phosphorylation of modulator protein RsbR governs its ability to regulate a serine kinase in the environmental stress signaling pathway of Bacillus subtilis
-
Gaidenko, T.A., Yang, X., Lee, Y.M., and Price, C.W. 1999. Threonine phosphorylation of modulator protein RsbR governs its ability to regulate a serine kinase in the environmental stress signaling pathway of Bacillus subtilis. J Mol Biol 288:29-39.
-
(1999)
J Mol Biol
, vol.288
, pp. 29-39
-
-
Gaidenko, T.A.1
Yang, X.2
Lee, Y.M.3
Price, C.W.4
-
15
-
-
0033277340
-
The histidine protein kinase superfamily
-
Grebe, T.W., and Stock, J.B. 1999. The histidine protein kinase superfamily. Adv Microb Physiol 41:139-227.
-
(1999)
Adv Microb Physiol
, vol.41
, pp. 139-227
-
-
Grebe, T.W.1
Stock, J.B.2
-
16
-
-
0034987011
-
General stress response of Bacillus subtilis and other bacteria
-
Hecker, M., and Völker, U. 2001. General stress response of Bacillus subtilis and other bacteria. Adv Microbial Physiol 44:35-91.
-
(2001)
Adv Microbial Physiol
, vol.44
, pp. 35-91
-
-
Hecker, M.1
Völker, U.2
-
17
-
-
0033118222
-
Anti-sigma factors
-
Helman, J.D. 1999. Anti-sigma factors. Curr Opin Microbiol 2:135-141.
-
(1999)
Curr Opin Microbiol
, vol.2
, pp. 135-141
-
-
Helman, J.D.1
-
18
-
-
10544255079
-
Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae
-
Himmelreich, R., Hubert, H., Plagens, H., Pirkl, E., Li, B.C., and Herrmann, R. 1996. Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. Nucl Acids Res 15:4420-4449.
-
(1996)
Nucl Acids Res
, vol.15
, pp. 4420-4449
-
-
Himmelreich, R.1
Hubert, H.2
Plagens, H.3
Pirkl, E.4
Li, B.C.5
Herrmann, R.6
-
19
-
-
16844384949
-
Comprehensive characterization of the contribution of individual SigB-dependent genes to stress resistance of Bacillus subtilis
-
Höper, D., Völker, U., and Hecker, M. 2005. Comprehensive characterization of the contribution of individual SigB-dependent genes to stress resistance of Bacillus subtilis. J Bacteriol 187:2810-2826.
-
(2005)
J Bacteriol
, vol.187
, pp. 2810-2826
-
-
Höper, D.1
Völker, U.2
Hecker, M.3
-
20
-
-
0034598826
-
Myoglobin-like aerotaxis transducers in archaea and bacteria
-
Hou, S., Larsen, R.W., Boudko, D., Riley, C.W., Karatan, E., Zimmer, M., Ordal, G.W., and Alam, M. 2000. Myoglobin-like aerotaxis transducers in archaea and bacteria. Nature 403:540-544.
-
(2000)
Nature
, vol.403
, pp. 540-544
-
-
Hou, S.1
Larsen, R.W.2
Boudko, D.3
Riley, C.W.4
Karatan, E.5
Zimmer, M.6
Ordal, G.W.7
Alam, M.8
-
21
-
-
0025144155
-
Similar organization of the sigB and spoIIA operons encoding alternate sigma factors of Bacillus subtilis RNA polymerase
-
Kalman, S., Duncan, M.L., Thomas, S.M., and Price, C.W. 1990. Similar organization of the sigB and spoIIA operons encoding alternate sigma factors of Bacillus subtilis RNA polymerase. J Bacteriol 172:5575-5585.
-
(1990)
J Bacteriol
, vol.172
, pp. 5575-5585
-
-
Kalman, S.1
Duncan, M.L.2
Thomas, S.M.3
Price, C.W.4
-
22
-
-
0037099657
-
A GAF-domain-regulated adenylyl cyclase from Anabaena is a self-activating cAMP switch
-
Kanacher, T., Schultz, A., Linder, J.U., and Schultz, J.E. 2002. A GAF-domain-regulated adenylyl cyclase from Anabaena is a self-activating cAMP switch. EMBO J 15:3672-3680.
-
(2002)
EMBO J
, vol.15
, pp. 3672-3680
-
-
Kanacher, T.1
Schultz, A.2
Linder, J.U.3
Schultz, J.E.4
-
24
-
-
4143126679
-
A multicomponent protein complex mediates environmental stress signaling in Bacillus subtilis
-
Kim, T.-J., Gaidenko, T.A., and Price, C.W. 2004a. A multicomponent protein complex mediates environmental stress signaling in Bacillus subtilis. J Mol Biol 341:135-150.
-
(2004)
J Mol Biol
, vol.341
, pp. 135-150
-
-
Kim, T.-J.1
Gaidenko, T.A.2
Price, C.W.3
-
25
-
-
4143126160
-
In vivo phosphorylation of partner switching regulators correlates with stress transmission in the environmental signalling pathway of Bacillus subtilis
-
Kim, T.-J., Gaidenko, T.A., and Price, C.W. 2004b. In vivo phosphorylation of partner switching regulators correlates with stress transmission in the environmental signalling pathway of Bacillus subtilis. J Bacteriol 186:6124-6132.
-
(2004)
J Bacteriol
, vol.186
, pp. 6124-6132
-
-
Kim, T.-J.1
Gaidenko, T.A.2
Price, C.W.3
-
26
-
-
0345864022
-
SMART 4.0: Towards genomic data integration
-
Letunic, I., Copley, R.R., Schmidt, S., Ciccarelli, F.D., Doerks, T., Schultz, J., Ponting, C.P., and Bork, P. 2004. SMART 4.0: towards genomic data integration. Nucl Acids Res 32:D142-D144.
-
(2004)
Nucl Acids Res
, vol.32
-
-
Letunic, I.1
Copley, R.R.2
Schmidt, S.3
Ciccarelli, F.D.4
Doerks, T.5
Schultz, J.6
Ponting, C.P.7
Bork, P.8
-
27
-
-
0036224807
-
First evidence for phototropin-related blue-light receptors in prokaryotes
-
Losi, A., Polverini, E., Quest, B., and Gartner, W. 2002. First evidence for phototropin-related blue-light receptors in prokaryotes. Biophys J 82:2627-2634.
-
(2002)
Biophys J
, vol.82
, pp. 2627-2634
-
-
Losi, A.1
Polverini, E.2
Quest, B.3
Gartner, W.4
-
28
-
-
1142304289
-
Listening to the blues: The time resolved thermodynamics of the bacterial blue-light receptor YtvA and its isolated LOV domain
-
Losi, A., Quest, B., and Gartner, W. 2003. Listening to the blues: the time resolved thermodynamics of the bacterial blue-light receptor YtvA and its isolated LOV domain. Photochem Photobiol Sci 2:759-766.
-
(2003)
Photochem Photobiol Sci
, vol.2
, pp. 759-766
-
-
Losi, A.1
Quest, B.2
Gartner, W.3
-
29
-
-
0035102449
-
Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics
-
Makarova, K.S., Aravind, L., Wolf, Y.I., Tatusov, R.L., Minton, K.W., Koonin, E.V., and Daly, M. 2001. Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics. Microbiol Mol Biol Rev 65:44-79.
-
(2001)
Microbiol Mol Biol Rev
, vol.65
, pp. 44-79
-
-
Makarova, K.S.1
Aravind, L.2
Wolf, Y.I.3
Tatusov, R.L.4
Minton, K.W.5
Koonin, E.V.6
Daly, M.7
-
30
-
-
0037252683
-
CDD: A curated Entrez database of conserved domain alignments
-
Marchler-Bauer, A., Anderson, J.B., DeWeese-Scott, C., Fedorova, N.D., Geer, L.Y., He, S., Hurwitz, D.I., Jackson, J.D., Jacobs, A.R., Lanczycki, C.J., et al. 2003. CDD: a curated Entrez database of conserved domain alignments. Nucl Acids Res 31:383-387.
-
(2003)
Nucl Acids Res
, vol.31
, pp. 383-387
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
DeWeese-Scott, C.3
Fedorova, N.D.4
Geer, L.Y.5
He, S.6
Hurwitz, D.I.7
Jackson, J.D.8
Jacobs, A.R.9
Lanczycki, C.J.10
-
31
-
-
0029560733
-
An essential aspartic acid at each of two allosteric cGMP-binding sites of a cGMP-specific phosphodiesterase
-
McAllister-Lucas, L.M., Haik, T.L., Colbran, J.L., Sonnenburg, W.K., Seger, D., Turko, I.V., Beavo, J.A., Francis, S.H., and Corbin, J.D. 1995. An essential aspartic acid at each of two allosteric cGMP-binding sites of a cGMP-specific phosphodiesterase. J Biol Chem 22:30671-30679.
-
(1995)
J Biol Chem
, vol.22
, pp. 30671-30679
-
-
McAllister-Lucas, L.M.1
Haik, T.L.2
Colbran, J.L.3
Sonnenburg, W.K.4
Seger, D.5
Turko, I.V.6
Beavo, J.A.7
Francis, S.H.8
Corbin, J.D.9
-
32
-
-
0027328345
-
Sigma F, the first compartment-specific transcription factor of B. subtilis, is regulated by an anti-sigma factor that is also a protein kinase
-
Min, K.T., Hilditch, C.M., Diederich, B., Errington, J., and Yudkin, M.D. 1993. Sigma F, the first compartment-specific transcription factor of B. subtilis, is regulated by an anti-sigma factor that is also a protein kinase. Cell 27:735-742.
-
(1993)
Cell
, vol.27
, pp. 735-742
-
-
Min, K.T.1
Hilditch, C.M.2
Diederich, B.3
Errington, J.4
Yudkin, M.D.5
-
33
-
-
0035988313
-
B of Bacillus subtilis and its regulatory proteins
-
B of Bacillus subtilis and its regulatory proteins. J Mol Microbiol Biotechnol 4:427-452.
-
(2002)
J Mol Microbiol Biotechnol
, vol.4
, pp. 427-452
-
-
Mittenhuber, G.1
-
34
-
-
27944452772
-
Structure of a non-heme globin in environmental stress signaling
-
USA, in press
-
Murray, J.W., Delumeau, O., and Lewis, R.J. 2005. Structure of a non-heme globin in environmental stress signaling. Proc Natl Acad Sci USA, in press.
-
(2005)
Proc Natl Acad Sci
-
-
Murray, J.W.1
Delumeau, O.2
Lewis, R.J.3
-
36
-
-
0034810821
-
Global analysis of the general stress reponse of Bacillus subtilis
-
Petersohn, A., Brigulla, M., Haas, S., Hoheisel, J.D., Völker, U., and Hecker, M. 2001. Global analysis of the general stress reponse of Bacillus subtilis. J Bacteriol 183:5617-5631.
-
(2001)
J Bacteriol
, vol.183
, pp. 5617-5631
-
-
Petersohn, A.1
Brigulla, M.2
Haas, S.3
Hoheisel, J.D.4
Völker, U.5
Hecker, M.6
-
37
-
-
8844286124
-
Sporulation in Bacillus subtilis
-
Piggot, P., and Hilbert, D.W. 2004. Sporulation in Bacillus subtilis. Curr Opin Microbiol 7:579-586.
-
(2004)
Curr Opin Microbiol
, vol.7
, pp. 579-586
-
-
Piggot, P.1
Hilbert, D.W.2
-
38
-
-
0035724157
-
Genome-wide analysis of the general stress response in Bacillus subtilis
-
Price, C.W., Fawcett, P., Cérémonie, H., Su, N., Murphy, C.K., and Youngman, P. 2001. Genome-wide analysis of the general stress response in Bacillus subtilis. Mol Microbiol 41:757-774.
-
(2001)
Mol Microbiol
, vol.41
, pp. 757-774
-
-
Price, C.W.1
Fawcett, P.2
Cérémonie, H.3
Su, N.4
Murphy, C.K.5
Youngman, P.6
-
39
-
-
0002759527
-
General stress response
-
Sonenshein, A.L., Hoch, J.A., and Losick, R. (eds): Washington, American Society for Microbiology Press
-
Price, C.W. 2002. General stress response; in Sonenshein, A.L., Hoch, J.A., and Losick, R. (eds): Bacillus subtilis and its closest relatives: From genes to cells. Washington, American Society for Microbiology Press, pp 369-384.
-
(2002)
Bacillus subtilis and Its Closest Relatives: From Genes to Cells
, pp. 369-384
-
-
Price, C.W.1
-
40
-
-
18144406818
-
Structural and functional analysis of the C-terminal STAS (sulfate transporter and anti-sigma antagonist) domain of the Arabidopsis thaliana sulfate transporter SULTR1.2
-
Rouached, H., Berthomieu, P., Kassis, E.E., Cathala, N., Catheriont, V., Labesse, G., Davidian, J.-C., and Fourcroy, P. 2005. Structural and functional analysis of the C-terminal STAS (sulfate transporter and anti-sigma antagonist) domain of the Arabidopsis thaliana sulfate transporter SULTR1.2. J Biol Chem 280:15976-15983.
-
(2005)
J Biol Chem
, vol.280
, pp. 15976-15983
-
-
Rouached, H.1
Berthomieu, P.2
Kassis, E.E.3
Cathala, N.4
Catheriont, V.5
Labesse, G.6
Davidian, J.-C.7
Fourcroy, P.8
-
41
-
-
14244254898
-
Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: Insights into biochemistry of the GGDEF protein domain
-
Ryjenkov, D.A., Tarutina, M., Moskvin, O.V., and Gomelsky M. 2005. Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into biochemistry of the GGDEF protein domain. J Bacteriol 187:1792-1798.
-
(2005)
J Bacteriol
, vol.187
, pp. 1792-1798
-
-
Ryjenkov, D.A.1
Tarutina, M.2
Moskvin, O.V.3
Gomelsky, M.4
-
42
-
-
0031764045
-
The serine, threonine, and/or tyrosine-specific protein kinases and protein phosphatases of prokaryotic organisms: A family portrait
-
Shi, L., Potts, M., and Kennelly, P.J. 1998. The serine, threonine, and/or tyrosine-specific protein kinases and protein phosphatases of prokaryotic organisms: a family portrait. FEMS Micro Rev 22:229-253.
-
(1998)
FEMS Micro Rev
, vol.22
, pp. 229-253
-
-
Shi, L.1
Potts, M.2
Kennelly, P.J.3
-
43
-
-
0032448264
-
Isolation and characterization of Bacillus subtilis sigB operon mutations that suppress the loss of the negative regulator RsbX
-
Smirnova, N., Scott, J., Voelker, U., and Haldenwang, W.G. 1998. Isolation and characterization of Bacillus subtilis sigB operon mutations that suppress the loss of the negative regulator RsbX. J Bacteriol 180:3671-3680.
-
(1998)
J Bacteriol
, vol.180
, pp. 3671-3680
-
-
Smirnova, N.1
Scott, J.2
Voelker, U.3
Haldenwang, W.G.4
-
44
-
-
0025805549
-
Bacterial chemotaxis and the molecular logic of intracellular signal transduction networks
-
Stock, J.B., Lukat, G.S., and Stock A.M. 1991. Bacterial chemotaxis and the molecular logic of intracellular signal transduction networks. Ann Rev Biophys Biophys Chem 20:109-136.
-
(1991)
Ann Rev Biophys Biophys Chem
, vol.20
, pp. 109-136
-
-
Stock, J.B.1
Lukat, G.S.2
Stock, A.M.3
-
45
-
-
0033791468
-
Two-component signal transduction
-
Stock, A.M., Robinson, V.L., and Goudreau, P.N. 2000. Two-component signal transduction. Annu Rev Biochem 69:183-215.
-
(2000)
Annu Rev Biochem
, vol.69
, pp. 183-215
-
-
Stock, A.M.1
Robinson, V.L.2
Goudreau, P.N.3
-
46
-
-
0031808469
-
PRD - A protein domain involved in PTS-dependent induction and carbon catabolite repression of catabolic operons in bacteria
-
Stülke, J., Arnaud, M., Rapoport, G., and Martin-Verstraete, I. 1998. PRD - A protein domain involved in PTS-dependent induction and carbon catabolite repression of catabolic operons in bacteria. Mol Microbiol 28:865-874.
-
(1998)
Mol Microbiol
, vol.28
, pp. 865-874
-
-
Stülke, J.1
Arnaud, M.2
Rapoport, G.3
Martin-Verstraete, I.4
-
47
-
-
0032990441
-
PAS domains: Internal sensors of oxygen, redox potential and light
-
Taylor, B.L., and Zhulin, I.B. 1999. PAS domains: Internal sensors of oxygen, redox potential and light. Microbiol Mol Biol Rev 63:479-506.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 479-506
-
-
Taylor, B.L.1
Zhulin, I.B.2
-
49
-
-
0029788057
-
B antagonist, RsbV, by stress- or starvation-induced phosphatease activities
-
B antagonist, RsbV, by stress- or starvation-induced phosphatease activities. J Bacteriol 178:5456-5463.
-
(1996)
J Bacteriol
, vol.178
, pp. 5456-5463
-
-
Voelker, U.1
Voelker, A.2
Haldenwang, W.G.3
-
51
-
-
0028859016
-
B in response to environmental signals
-
B in response to environmental signals. J Bacteriol 177:123-133.
-
(1995)
J Bacteriol
, vol.177
, pp. 123-133
-
-
Wise, A.A.1
Price, C.W.2
-
52
-
-
0023184331
-
Bacterial evolution
-
Woese, C.R. 1987. Bacterial evolution. Microbiol Rev 51:221-271.
-
(1987)
Microbiol Rev
, vol.51
, pp. 221-271
-
-
Woese, C.R.1
-
53
-
-
0039820099
-
Eubacterial sigma-factors
-
Wosten, M.M. 1998. Eubacterial sigma-factors. FEMS Microbiol Rev 22:127-150.
-
(1998)
FEMS Microbiol Rev
, vol.22
, pp. 127-150
-
-
Wosten, M.M.1
-
54
-
-
10144255829
-
Opposing pairs of serine protein kinases and phosphatases transmit signals of environmental stress to activate a bacterial transcription factor
-
Yang, X., Kang, C.M., Brody, M.S., and Price, C.W. 1996. Opposing pairs of serine protein kinases and phosphatases transmit signals of environmental stress to activate a bacterial transcription factor. Genes Dev 10:2265-2275.
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(1996)
Genes Dev
, vol.10
, pp. 2265-2275
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Yang, X.1
Kang, C.M.2
Brody, M.S.3
Price, C.W.4
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