메뉴 건너뛰기




Volumn 92, Issue 2, 2005, Pages 147-159

Effect of ArcA and FNR on the expression of genes related to the oxygen regulation and the glycolysis pathway in Escherichia coli under microaerobic growth conditions

Author keywords

Fermentative genes; Lactate; Microaerobic conditions; Pyruvate metabolism; QRT PCR

Indexed keywords

CELL CULTURE; ELECTRONS; GENES; METABOLISM; MUTAGENESIS; OXYGEN; PROTEINS;

EID: 27744565164     PISSN: 00063592     EISSN: None     Source Type: Journal    
DOI: 10.1002/bit.20583     Document Type: Article
Times cited : (106)

References (36)
  • 1
    • 0033895840 scopus 로고    scopus 로고
    • Effects of limited aeration and of the ArcAB system on intermediary pyruvate catabolism in Escherichia coli
    • Alexeeva S, de Kort B, Sawers G, Hellingwerf KJ, Teixeira de Mattos MJ. 2000. Effects of limited aeration and of the ArcAB system on intermediary pyruvate catabolism in Escherichia coli. J Bacteriol 182: 4934-4940.
    • (2000) J Bacteriol , vol.182 , pp. 4934-4940
    • Alexeeva, S.1    De Kort, B.2    Sawers, G.3    Hellingwerf, K.J.4    Teixeira De Mattos, M.J.5
  • 2
    • 0036177861 scopus 로고    scopus 로고
    • Quantitative assessment of oxygen availability: Perceived aerobiosis and its effect on flux distribution in the respiratory chain of Escherichia coli
    • Alexeeva S, Hellingwerf KJ, Teixeira de Mattos MJ. 2002. Quantitative assessment of oxygen availability: Perceived aerobiosis and its effect on flux distribution in the respiratory chain of Escherichia coli. J Bacteriol 184:1402-1406.
    • (2002) J Bacteriol , vol.184 , pp. 1402-1406
    • Alexeeva, S.1    Hellingwerf, K.J.2    Teixeira De Mattos, M.J.3
  • 3
    • 0030695902 scopus 로고    scopus 로고
    • Redox potentials of glutaredoxins and other thiol-disulfide oxidoreductases of the thioredoxins super-family determined by direct protein-protein redox equilibria
    • Åslund F, Berndt KD, Holmgren A. 1997. Redox potentials of glutaredoxins and other thiol-disulfide oxidoreductases of the thioredoxins super-family determined by direct protein-protein redox equilibria. J Biol Chem 272:30780-30786.
    • (1997) J Biol Chem , vol.272 , pp. 30780-30786
    • Åslund, F.1    Berndt, K.D.2    Holmgren, A.3
  • 4
    • 0028990246 scopus 로고
    • Characterization of FNR* mutant proteins indicates two distinct mechanisms for altering oxygen regulation of Escherichia coli transcription factor FNR
    • Bates DM, Lazazzera BA, Kiley PJ. 1995. Characterization of FNR* mutant proteins indicates two distinct mechanisms for altering oxygen regulation of Escherichia coli transcription factor FNR. J Bacteriol 177:3972-3978.
    • (1995) J Bacteriol , vol.177 , pp. 3972-3978
    • Bates, D.M.1    Lazazzera, B.A.2    Kiley, P.J.3
  • 6
    • 0029664739 scopus 로고    scopus 로고
    • 2 as the regulatory signal for FNR-dependent gene regulation in Escherichia coli
    • 2 as the regulatory signal for FNR-dependent gene regulation in Escherichia coli. J Bacteriol 178:4515-4521.
    • (1996) J Bacteriol , vol.178 , pp. 4515-4521
    • Becker, S.1    Holighaus, G.2    Gabrielczyk, T.3    Unden, G.4
  • 8
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97:6640-6645.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 9
    • 0033544879 scopus 로고    scopus 로고
    • Amplification of signaling activity of the Arc two-component system of Escherichia coli by anaerobic metabolites. An in vitro study with different protein medules
    • Georgellis D, Kwon O, Lin ECC. 1999. Amplification of signaling activity of the Arc two-component system of Escherichia coli by anaerobic metabolites. An in vitro study with different protein medules. J Biol Chem 274:35950-35954.
    • (1999) J Biol Chem , vol.274 , pp. 35950-35954
    • Georgellis, D.1    Kwon, O.2    Lin, E.C.C.3
  • 10
    • 0027474352 scopus 로고
    • Properties of FNR protein substituted at each of the five cysteine residues
    • Green J, Sharrocks AD, Green B, Geisow M, Guest JR. 1993. Properties of FNR protein substituted at each of the five cysteine residues. Mol Microbiol 8:61-68.
    • (1993) Mol Microbiol , vol.8 , pp. 61-68
    • Green, J.1    Sharrocks, A.D.2    Green, B.3    Geisow, M.4    Guest, J.R.5
  • 11
    • 0031815910 scopus 로고    scopus 로고
    • Downregulation of Escherichia coli yfiD expression by FNR occupying a site at -93.5 involves the AR1-containing surface of FNR
    • Green J, Baldwin ML, Richardson J. 1998. Downregulation of Escherichia coli yfiD expression by FNR occupying a site at -93.5 involves the AR1-containing surface of FNR. Mol Microbiol 29:1113-1123.
    • (1998) Mol Microbiol , vol.29 , pp. 1113-1123
    • Green, J.1    Baldwin, M.L.2    Richardson, J.3
  • 13
    • 0026539733 scopus 로고
    • Control of electron flow in Escherichia coli: Coordinated transcription of respiratory pathway genes
    • Gunsalus RP. 1992. Control of electron flow in Escherichia coli: Coordinated transcription of respiratory pathway genes. J Bacteriol 174:7069-7074.
    • (1992) J Bacteriol , vol.174 , pp. 7069-7074
    • Gunsalus, R.P.1
  • 14
    • 0001465771 scopus 로고    scopus 로고
    • Anaerobic dissimilation of pyruvate
    • Neidhardt FC, Editor in Chief, Curtiss R, Ingraham JI, Lin ECC, Low KB, Magasanik B, Reznikiff WS, Riley M, Schlechter M, Umbarger HE, editors. Washington, DC: ASM PRESS
    • Kessler D, Knappe J. 1996. Anaerobic dissimilation of pyruvate. In: Neidhardt FC, Editor in Chief, Curtiss R, Ingraham JI, Lin ECC, Low KB, Magasanik B, Reznikiff WS, Riley M, Schlechter M, Umbarger HE, editors. Escherichia coli and Salmonella cellular and molecular Biology, Vol. 1, 2nd edition. Washington, DC: ASM PRESS, pp 199-205.
    • (1996) Escherichia Coli and Salmonella Cellular and Molecular Biology, Vol. 1, 2nd Edition , vol.1 , pp. 199-205
    • Kessler, D.1    Knappe, J.2
  • 15
    • 0028960504 scopus 로고
    • Association of a polynuclear iron-sulfur center with a mutant FNR protein enhances DNA binding
    • Khoroshilova N, Beinert H, Kiley PJ. 1995. Association of a polynuclear iron-sulfur center with a mutant FNR protein enhances DNA binding. Proc Natl Acad Sci USA 92:2499-2503.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 2499-2503
    • Khoroshilova, N.1    Beinert, H.2    Kiley, P.J.3
  • 16
    • 0030029817 scopus 로고    scopus 로고
    • DNA binding and dimerization of the Fe-S-containing FNR protein from Escherichia coli are regulated by oxygen
    • Lazazzera BA, Beinert H, Khoroshilova N, Kennedy MC, Kiley PJ. 1996. DNA binding and dimerization of the Fe-S-containing FNR protein from Escherichia coli are regulated by oxygen. J Biol Chem 271:2762-2768.
    • (1996) J Biol Chem , vol.271 , pp. 2762-2768
    • Lazazzera, B.A.1    Beinert, H.2    Khoroshilova, N.3    Kennedy, M.C.4    Kiley, P.J.5
  • 17
    • 0027405182 scopus 로고
    • Anaerobic regulation of the adhE gene, encoding the fermentative alcohol dehydrogenase of Escherichia coli
    • Leonardo MR, Cunningham PR, Clark DP. 1993. Anaerobic regulation of the adhE gene, encoding the fermentative alcohol dehydrogenase of Escherichia coli. J Bacteriol 175:870-878.
    • (1993) J Bacteriol , vol.175 , pp. 870-878
    • Leonardo, M.R.1    Cunningham, P.R.2    Clark, D.P.3
  • 18
    • 0026326054 scopus 로고
    • Regulation of gene expression in fermentative and respiratory systems in Escherichia coli and related bacteria
    • Lin ECC, Iuchi S. 1991. Regulation of gene expression in fermentative and respiratory systems in Escherichia coli and related bacteria. Annu Rev Genet 25:361-387.
    • (1991) Annu Rev Genet , vol.25 , pp. 361-387
    • Lin, E.C.C.1    Iuchi, S.2
  • 19
    • 0003162406 scopus 로고    scopus 로고
    • Regulation of aerobic and anaerobic metabolism by the Arc system
    • Lin ECC, Lynch AS, editors. New York: Chapman & Hall
    • Lynch AS, Lin ECC. 1996. Regulation of aerobic and anaerobic metabolism by the Arc system. In: Lin ECC, Lynch AS, editors. Regulation of gene expression in Escherichia coli. New York: Chapman & Hall, pp 361-381.
    • (1996) Regulation of Gene Expression in Escherichia Coli , pp. 361-381
    • Lynch, A.S.1    Lin, E.C.C.2
  • 21
    • 0028341449 scopus 로고
    • A+U content rather than a particular nucleotide order determines the specificity of RNase e cleavage
    • McDowall KJ, Lin-Chao S, Cohen SN. 1994. A+U content rather than a particular nucleotide order determines the specificity of RNase E cleavage. J Biol Chem 269:10790-10796.
    • (1994) J Biol Chem , vol.269 , pp. 10790-10796
    • McDowall, K.J.1    Lin-Chao, S.2    Cohen, S.N.3
  • 23
    • 0028856397 scopus 로고
    • Oxygen, iron, carbon, and superoxide control of the fumarase fumA and fum C Genes of Escherichia coli: Role of arcA, fnr and soxR gene products
    • Park SJ, Gunsalus RP. 1995. Oxygen, iron, carbon, and superoxide control of the fumarase fumA and fum C Genes of Escherichia coli: Role of arcA, fnr and soxR gene products. J Bacteriol 177:6255-6262.
    • (1995) J Bacteriol , vol.177 , pp. 6255-6262
    • Park, S.J.1    Gunsalus, R.P.2
  • 24
    • 0028177225 scopus 로고
    • The pdhR-aceEF-lpd operon of Escherichia coli expresses the pyruvate dehydrogenase complex
    • Quail MA, Haydon DJ, Guest JR. 1994. The pdhR-aceEF-lpd operon of Escherichia coli expresses the pyruvate dehydrogenase complex. Mol Microbiol 12:95-104.
    • (1994) Mol Microbiol , vol.12 , pp. 95-104
    • Quail, M.A.1    Haydon, D.J.2    Guest, J.R.3
  • 25
    • 0043032584 scopus 로고    scopus 로고
    • Global gene expression profiling in Escherichia coli K12: The effect of oxygen availability and FNR
    • Salmon K, Hung SP, Mekjian K, Baldi P, Hatfield GW, Gunsalus RP. 2003. Global gene expression profiling in Escherichia coli K12: The effect of oxygen availability and FNR. J Biol Chem 278:29837-29855.
    • (2003) J Biol Chem , vol.278 , pp. 29837-29855
    • Salmon, K.1    Hung, S.P.2    Mekjian, K.3    Baldi, P.4    Hatfield, G.W.5    Gunsalus, R.P.6
  • 26
    • 0025373543 scopus 로고
    • Transcriptional analysis of the gene encoding pyruvate formate-lyase-activating enzyme of Escherichia coli
    • Sauter M, Sawers RG. 1990. Transcriptional analysis of the gene encoding pyruvate formate-lyase-activating enzyme of Escherichia coli. Mol Microbiol 4:355-363.
    • (1990) Mol Microbiol , vol.4 , pp. 355-363
    • Sauter, M.1    Sawers, R.G.2
  • 27
    • 0026623120 scopus 로고
    • Anaerobic induction of pyruvate formate-lyase gene expression is mediated by the ArcA and FNR proteins
    • Sawers G, Suppmann B. 1992. Anaerobic induction of pyruvate formate-lyase gene expression is mediated by the ArcA and FNR proteins. J Bacteriol 174:3474-3478.
    • (1992) J Bacteriol , vol.174 , pp. 3474-3478
    • Sawers, G.1    Suppmann, B.2
  • 28
    • 15944366483 scopus 로고    scopus 로고
    • Effect of oxygen on the E. coli ArcA and FNR regulation systems and metabolic responses
    • Shalel-Levanon S, San KY, Bennett GN. 2005. Effect of oxygen on the E. coli ArcA and FNR regulation systems and metabolic responses. Biotech Bioeng 89:556-564.
    • (2005) Biotech Bioeng , vol.89 , pp. 556-564
    • Shalel-Levanon, S.1    San, K.Y.2    Bennett, G.N.3
  • 30
    • 0033862940 scopus 로고    scopus 로고
    • Role of glutathione in the formation of the active form of the oxygen sensor FNR [4Fe-4S] (FNR) and in the control of FNR function
    • Tran QH, Arras T, Becker S, Holighaus G, Ohlberger G, Unden G. 2000. Role of glutathione in the formation of the active form of the oxygen sensor FNR ([4Fe-4S] (FNR) and in the control of FNR function. Eur J Biochem 267:4817-4824.
    • (2000) Eur J Biochem , vol.267 , pp. 4817-4824
    • Tran, Q.H.1    Arras, T.2    Becker, S.3    Holighaus, G.4    Ohlberger, G.5    Unden, G.6
  • 31
    • 0030067649 scopus 로고    scopus 로고
    • Effect of microaerophilic cell growth conditions, on expression of the aerobic (cyoABCDEand cydAB) and anaerobic (narGHJI, frdABCD, and dmsABC) respiratory pathway genes in Escherichia coli
    • Tseng CP, Albrecht J, Gunsalus RP. 1996. Effect of microaerophilic cell growth conditions, on expression of the aerobic (cyoABCDEand cydAB) and anaerobic (narGHJI, frdABCD, and dmsABC) respiratory pathway genes in Escherichia coli. J Bacteriol 178:1094-1098.
    • (1996) J Bacteriol , vol.178 , pp. 1094-1098
    • Tseng, C.P.1    Albrecht, J.2    Gunsalus, R.P.3
  • 34
    • 0034741279 scopus 로고    scopus 로고
    • YfiD of Escherichia coli and Y06I of bacteriophage T4 as Aautonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase
    • Wagner AFV, Schulz S, Bomke J, Pils T, Lehmann WD, Knappe J. 2001. YfiD of Escherichia coli and Y06I of bacteriophage T4 as Aautonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase. Biochem Biophys Res Commun 285:456-462.
    • (2001) Biochem Biophys Res Commun , vol.285 , pp. 456-462
    • Wagner, A.F.V.1    Schulz, S.2    Bomke, J.3    Pils, T.4    Lehmann, W.D.5    Knappe, J.6
  • 35
    • 0036231445 scopus 로고    scopus 로고
    • Expression of Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products
    • Wyborn NR, Messenger SL, Henderson RA, Sawers G, Roberts RE, Attwood MM, Green J. 2002. Expression of Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products. Microbiology 148:1015-1026.
    • (2002) Microbiology , vol.148 , pp. 1015-1026
    • Wyborn, N.R.1    Messenger, S.L.2    Henderson, R.A.3    Sawers, G.4    Roberts, R.E.5    Attwood, M.M.6    Green, J.7
  • 36
    • 2442545374 scopus 로고    scopus 로고
    • The effect of pfl gene knockout on the metabolism for optically pure D-lactate production by Escherichia coli
    • Zhu J, Shimizu K. 2004. The effect of pfl gene knockout on the metabolism for optically pure D-lactate production by Escherichia coli. Appl Mirobiol Biotechnol 64:367-375.
    • (2004) Appl Mirobiol Biotechnol , vol.64 , pp. 367-375
    • Zhu, J.1    Shimizu, K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.