-
1
-
-
0034015997
-
Genetically and epidemiologically related "non-syncytium- inducing" isolates of HIV-1 display heterogeneous growth patterns in macrophages
-
Aquino-De Jesus, M. J., C. Anders, G. Miller, J. W. Sleasman, M. M. Goodenow, and W. A. Andiman. 2000. Genetically and epidemiologically related "non-syncytium-inducing" isolates of HIV-1 display heterogeneous growth patterns in macrophages. J. Med. Virol. 61:171-180.
-
(2000)
J. Med. Virol.
, vol.61
, pp. 171-180
-
-
Aquino-De Jesus, M.J.1
Anders, C.2
Miller, G.3
Sleasman, J.W.4
Goodenow, M.M.5
Andiman, W.A.6
-
2
-
-
0031957171
-
Patterns of CCR5, CXCR4, and CCR3 usage by envelope glycoproteins from human immunodeficiency virus type 1 primary isolates
-
Bazan, H. A., G. Alkhatib, C. C. Broder, and E. A. Berger. 1998. Patterns of CCR5, CXCR4, and CCR3 usage by envelope glycoproteins from human immunodeficiency virus type 1 primary isolates. J. Virol. 72:4485-4491.
-
(1998)
J. Virol.
, vol.72
, pp. 4485-4491
-
-
Bazan, H.A.1
Alkhatib, G.2
Broder, C.C.3
Berger, E.A.4
-
3
-
-
0042376485
-
A new classification for HIV-1
-
Berger, E. A., R. W. Doms, E. M. Fenyo, B. T. Korber, D. R. Littman, J. P. Moore, Q. J. Sattentau, H. Schuitemaker, J. Sodroski, and R. A. Weiss. 1998. A new classification for HIV-1. Nature 391:240.
-
(1998)
Nature
, vol.391
, pp. 240
-
-
Berger, E.A.1
Doms, R.W.2
Fenyo, E.M.3
Korber, B.T.4
Littman, D.R.5
Moore, J.P.6
Sattentau, Q.J.7
Schuitemaker, H.8
Sodroski, J.9
Weiss, R.A.10
-
4
-
-
0029067663
-
Synthesis and structure-activity relationships of phenylenebis(methylene) -linked bis-tetraazamacrocycles that inhibit HIV replication. Effects of macrocyclic ring size and substituents on the aromatic linker
-
Bridger, G. J., R. T. Skerlj, D. Thornton, S. Padmanabhan, S. A. Martellucci, G. W. Henson, M. J. Abrams, N. Yamamoto, K. De Vreese, R. Pauwels, and. 1995. Synthesis and structure-activity relationships of phenylenebis(methylene)-linked bis-tetraazamacrocycles that inhibit HIV replication. Effects of macrocyclic ring size and substituents on the aromatic linker. J. Med. Chem. 38:366-378.
-
(1995)
J. Med. Chem.
, vol.38
, pp. 366-378
-
-
Bridger, G.J.1
Skerlj, R.T.2
Thornton, D.3
Padmanabhan, S.4
Martellucci, S.A.5
Henson, G.W.6
Abrams, M.J.7
Yamamoto, N.8
De Vreese, K.9
Pauwels, R.10
-
5
-
-
0034523325
-
Envelope V3 amino acid sequence predicts HIV-1 phenotype (co-receptor usage and tropism for macrophages)
-
Briggs, D. R., D. L. Tuttle, J. W. Sleasman, and M. M. Goodenow. 2000. Envelope V3 amino acid sequence predicts HIV-1 phenotype (co-receptor usage and tropism for macrophages). AIDS 14:2937-2939.
-
(2000)
AIDS
, vol.14
, pp. 2937-2939
-
-
Briggs, D.R.1
Tuttle, D.L.2
Sleasman, J.W.3
Goodenow, M.M.4
-
6
-
-
16444362796
-
Transforming growth factor-beta increase CXCR4 expression, stromal-derived factor-1 a-stimulated signalling and human immunodeficiency virus-1 entry in human monocyte-derived macrophages
-
Chen, S., D. Tuttle, J. T. Oshier, S. J. Wolfgang, M. Goodenow, and J. K. Harrison. 2005. Transforming growth factor-beta increase CXCR4 expression, stromal-derived factor-1 a-stimulated signalling and human immunodeficiency virus-1 entry in human monocyte-derived macrophages. Immunology 114:565-574.
-
(2005)
Immunology
, vol.114
, pp. 565-574
-
-
Chen, S.1
Tuttle, D.2
Oshier, J.T.3
Wolfgang, S.J.4
Goodenow, M.5
Harrison, J.K.6
-
7
-
-
0029987361
-
Mapping of independent V3 envelope determinants of human immunodeficiency virus type 1 macrophage tropism and syncytium formation in lymphocytes
-
Chesebro, B., K. Wehrly, J. Nishio, and S. Perryman. 1996. Mapping of independent V3 envelope determinants of human immunodeficiency virus type 1 macrophage tropism and syncytium formation in lymphocytes. J. Virol. 70:9055-9059.
-
(1996)
J. Virol.
, vol.70
, pp. 9055-9059
-
-
Chesebro, B.1
Wehrly, K.2
Nishio, J.3
Perryman, S.4
-
8
-
-
0031935146
-
Identification of determinants on a dualtropic human immunodeficiency virus type 1 envelope glycoprotein that confer usage of CXCR4
-
Cho, M. W., M. K. Lee, M. C. Carney, J. F. Berson, R. W. Doms, and M. A. Martin. 1998. Identification of determinants on a dualtropic human immunodeficiency virus type 1 envelope glycoprotein that confer usage of CXCR4. J. Virol. 72:2509-2515.
-
(1998)
J. Virol.
, vol.72
, pp. 2509-2515
-
-
Cho, M.W.1
Lee, M.K.2
Carney, M.C.3
Berson, J.F.4
Doms, R.W.5
Martin, M.A.6
-
9
-
-
6344277268
-
Impact on genetic networks in human macrophages by a CCR5 strain of human immunodeficiency virus type 1
-
Coberley, C. R., J. J. Kohler, J. N. Brown, J. T. Oshier, H. V. Baker, M. P. Popp, J. W. Sleasman, and M. M. Goodenow. 2004. Impact on genetic networks in human macrophages by a CCR5 strain of human immunodeficiency virus type 1. J. Virol. 78:11477-11486.
-
(2004)
J. Virol.
, vol.78
, pp. 11477-11486
-
-
Coberley, C.R.1
Kohler, J.J.2
Brown, J.N.3
Oshier, J.T.4
Baker, H.V.5
Popp, M.P.6
Sleasman, J.W.7
Goodenow, M.M.8
-
10
-
-
0028842207
-
Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes
-
Connor, R. I., B. K. Cben, S. Choe, and N. R. Landau. 1995. Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes. Virology 206:935-944.
-
(1995)
Virology
, vol.206
, pp. 935-944
-
-
Connor, R.I.1
Cben, B.K.2
Choe, S.3
Landau, N.R.4
-
11
-
-
0028209166
-
Highly potent and selective inhibition of human immunodeficiency virus by the bicyclam derivative JM3100
-
De Clercq, E., N. Yamamoto, R. Pauwels, J. Balzarini, M. Witvrouw, K. De Vreese, Z. Debyser, B. Rosenwirth, P. Peichl, R. Datema, and. 1994. Highly potent and selective inhibition of human immunodeficiency virus by the bicyclam derivative JM3100. Antimicrob. Agents Chemother. 38:668-674.
-
(1994)
Antimicrob. Agents Chemother.
, vol.38
, pp. 668-674
-
-
De Clercq, E.1
Yamamoto, N.2
Pauwels, R.3
Balzarini, J.4
Witvrouw, M.5
De Vreese, K.6
Debyser, Z.7
Rosenwirth, B.8
Peichl, P.9
Datema, R.10
-
12
-
-
15844419153
-
Identification of a major co-receptor for primary isolates of HIV-1
-
Deng, H., R. Liu, W. Ellmeier, S. Choe, D. Unutmaz, M. Burkhart, P. Di Marzio, S. Marmon, R. E. Sutton, C. M. Hill, C. B. Davis, S. C. Peiper, T. J. Schall, D. R. Littman, and N. R. Landau. 1996. Identification of a major co-receptor for primary isolates of HIV-1. Nature 381:661-666.
-
(1996)
Nature
, vol.381
, pp. 661-666
-
-
Deng, H.1
Liu, R.2
Ellmeier, W.3
Choe, S.4
Unutmaz, D.5
Burkhart, M.6
Di Marzio, P.7
Marmon, S.8
Sutton, R.E.9
Hill, C.M.10
Davis, C.B.11
Peiper, S.C.12
Schall, T.J.13
Littman, D.R.14
Landau, N.R.15
-
13
-
-
0030751948
-
Expression cloning of new receptors used by simian and human immunodeficiency viruses
-
Deng, H. K., D. Unutmaz, V. N. Kewalramani, and D. R. Littman. 1997. Expression cloning of new receptors used by simian and human immunodeficiency viruses. Nature 388:296-300.
-
(1997)
Nature
, vol.388
, pp. 296-300
-
-
Deng, H.K.1
Unutmaz, D.2
Kewalramani, V.N.3
Littman, D.R.4
-
14
-
-
0034312298
-
The plasma membrane as a combat zone in the HIV battlefield
-
Doms, R. W., and D. Trono. 2000. The plasma membrane as a combat zone in the HIV battlefield. Genes Dev. 14:2677-2688.
-
(2000)
Genes Dev.
, vol.14
, pp. 2677-2688
-
-
Doms, R.W.1
Trono, D.2
-
15
-
-
15844389650
-
HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC-CKR-5
-
Dragic, T., V. Litwin, G. P. Allaway, S. R. Martin, Y. Huang, K. A. Nagashima, C. Cayanan, P. J. Maddon, R. A. Koup, J. P. Moore, and W. A. Paxton. 1996. HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC-CKR-5. Nature 381:667-673.
-
(1996)
Nature
, vol.381
, pp. 667-673
-
-
Dragic, T.1
Litwin, V.2
Allaway, G.P.3
Martin, S.R.4
Huang, Y.5
Nagashima, K.A.6
Cayanan, C.7
Maddon, P.J.8
Koup, R.A.9
Moore, J.P.10
Paxton, W.A.11
-
16
-
-
16144365390
-
CD4-independent infection by HIV-2 is mediated by fusin/CXCR4
-
Endres, M. J., P. R. Clapham, M. Marsh, M. Ahuja, J. D. Turner, A. McKnight, J. F. Thomas, B. Stoebenau-Haggarty, S. Choe, P. J. Vance, T. N. Wells, C. A. Power, S. S. Sutterwala, R. W. Doms, N. R. Landau, and J. A. Hoxie. 1996. CD4-independent infection by HIV-2 is mediated by fusin/CXCR4. Cell 87:745-756.
-
(1996)
Cell
, vol.87
, pp. 745-756
-
-
Endres, M.J.1
Clapham, P.R.2
Marsh, M.3
Ahuja, M.4
Turner, J.D.5
McKnight, A.6
Thomas, J.F.7
Stoebenau-Haggarty, B.8
Choe, S.9
Vance, P.J.10
Wells, T.N.11
Power, C.A.12
Sutterwala, S.S.13
Doms, R.W.14
Landau, N.R.15
Hoxie, J.A.16
-
17
-
-
0000122573
-
PHYLIP phylogeny package
-
Felsenstein, J. 1989. PHYLIP phylogeny package. Cladistics 5:164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
18
-
-
0034913033
-
Role of V3 independent domains on a dualtropic human immunodeficiency virus type 1 (HIV-1) envelope gp120 in CCR5 coreceptor utilization and viral infectivity
-
Foda, M., S. Harada, and Y. Maeda. 2001. Role of V3 independent domains on a dualtropic human immunodeficiency virus type 1 (HIV-1) envelope gp120 in CCR5 coreceptor utilization and viral infectivity. Microbiol. Immunol. 45:521-530.
-
(2001)
Microbiol. Immunol.
, vol.45
, pp. 521-530
-
-
Foda, M.1
Harada, S.2
Maeda, Y.3
-
19
-
-
0034828173
-
Human lymphocyte proliferation responses following primary immunization with rabies vaccine as neoantigen
-
Ghaffari, G., D. J. Passalacqua, B. S. Bender, D. J. Briggs, M. M. Goodenow, and J. W. Sleasman. 2001. Human lymphocyte proliferation responses following primary immunization with rabies vaccine as neoantigen. Clin. Diagn. Lab. Immunol. 8:880-883.
-
(2001)
Clin. Diagn. Lab. Immunol.
, vol.8
, pp. 880-883
-
-
Ghaffari, G.1
Passalacqua, D.J.2
Bender, B.S.3
Briggs, D.J.4
Goodenow, M.M.5
Sleasman, J.W.6
-
20
-
-
16644372369
-
Two-year clinical and immune outcomes in human immunodeficiency virus-infected children who reconstitute CD4 T cells without control of viral replication after combination antiretroviral therapy
-
Ghaffari, G., D. J. Passalacqua, J. L. Caicedo, M. M. Goodenow, and J. W. Sleasman. 2004. Two-year clinical and immune outcomes in human immunodeficiency virus-infected children who reconstitute CD4 T cells without control of viral replication after combination antiretroviral therapy. Pediatrics 114:e604-e611.
-
(2004)
Pediatrics
, vol.114
-
-
Ghaffari, G.1
Passalacqua, D.J.2
Caicedo, J.L.3
Goodenow, M.M.4
Sleasman, J.W.5
-
21
-
-
10744228558
-
The v3 loop is accessible on the surface of most human immunodeficiency virus type 1 primary isolates and serves as a neutralization epitope
-
Gorny, M. K., K. Revesz, C. Williams, B. Volsky, M. K. Louder, C. A. Anyangwe, C. Krachmarov, S. C. Kayman, A. Pinter, A. Nadas, P. N. Nyambi, J. R. Mascola, and S. Zolla-Pazner. 2004. The v3 loop is accessible on the surface of most human immunodeficiency virus type 1 primary isolates and serves as a neutralization epitope. J. Virol. 78:2394-2404.
-
(2004)
J. Virol.
, vol.78
, pp. 2394-2404
-
-
Gorny, M.K.1
Revesz, K.2
Williams, C.3
Volsky, B.4
Louder, M.K.5
Anyangwe, C.A.6
Krachmarov, C.7
Kayman, S.C.8
Pinter, A.9
Nadas, A.10
Nyambi, P.N.11
Mascola, J.R.12
Zolla-Pazner, S.13
-
22
-
-
0036720793
-
Human monoclonal antibodies specific for conformation-sensitive epitopes of V3 neutralize human immunodeficiency virus type 1 primary isolates from various clades
-
Gorny, M. K., C. Williams, B. Volsky, K. Revesz, S. Cohen, V. R. Polonis, W. J. Honnen, S. C. Kayman, C. Krachmarov, A. Pinter, and S. Zolla-Pazner. 2002. Human monoclonal antibodies specific for conformation-sensitive epitopes of V3 neutralize human immunodeficiency virus type 1 primary isolates from various clades. J. Virol. 76:9035-9045.
-
(2002)
J. Virol.
, vol.76
, pp. 9035-9045
-
-
Gorny, M.K.1
Williams, C.2
Volsky, B.3
Revesz, K.4
Cohen, S.5
Polonis, V.R.6
Honnen, W.J.7
Kayman, S.C.8
Krachmarov, C.9
Pinter, A.10
Zolla-Pazner, S.11
-
23
-
-
0034845961
-
CXCR4 undergoes complex lineage and inducing agent-dependent dissociation of expression and functional responsiveness to SDF-1alpha during myeloid differentiation
-
Gupta, S. K., K. Pillarisetti, and N. Aiyar. 2001. CXCR4 undergoes complex lineage and inducing agent-dependent dissociation of expression and functional responsiveness to SDF-1alpha during myeloid differentiation. J. Leukoc. Biol. 70:431-438.
-
(2001)
J. Leukoc. Biol.
, vol.70
, pp. 431-438
-
-
Gupta, S.K.1
Pillarisetti, K.2
Aiyar, N.3
-
26
-
-
0034466833
-
Evolution of the human immunodeficiency virus type 1 envelope during infection reveals molecular corollaries of specificity for coreceptor utilization and AIDS pathogenesis
-
Hu, Q. X., A. P. Barry, Z. X. Wang, S. M. Connolly, S. C. Peiper, and M. L. Greenberg. 2000. Evolution of the human immunodeficiency virus type 1 envelope during infection reveals molecular corollaries of specificity for coreceptor utilization and AIDS pathogenesis. J. Virol. 74:11858-11872.
-
(2000)
J. Virol.
, vol.74
, pp. 11858-11872
-
-
Hu, Q.X.1
Barry, A.P.2
Wang, Z.X.3
Connolly, S.M.4
Peiper, S.C.5
Greenberg, M.L.6
-
27
-
-
1142285205
-
CXCR4-tropic HIV-1 suppresses replication of CCR5-tropic HIV-1 in human lymphoid tissue by selective induction of CC-chemokines
-
Ito, Y., J. C. Grivel, S. Chen, Y. Kiselyeva, P. Reichelderfer, and L. Margolis. 2004. CXCR4-tropic HIV-1 suppresses replication of CCR5-tropic HIV-1 in human lymphoid tissue by selective induction of CC-chemokines. J. Infect. Dis. 189:506-514.
-
(2004)
J. Infect. Dis.
, vol.189
, pp. 506-514
-
-
Ito, Y.1
Grivel, J.C.2
Chen, S.3
Kiselyeva, Y.4
Reichelderfer, P.5
Margolis, L.6
-
28
-
-
0034030611
-
Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes a through G
-
Jeeninga, R. E., M. Hoogenkamp, M. Armand-Ugon, M. de Baar, K. Verhoef, and B. Berkhout. 2000. Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G. J. Virol. 74:3740-3751.
-
(2000)
J. Virol.
, vol.74
, pp. 3740-3751
-
-
Jeeninga, R.E.1
Hoogenkamp, M.2
Armand-Ugon, M.3
De Baar, M.4
Verhoef, K.5
Berkhout, B.6
-
29
-
-
10744231634
-
Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences
-
Jensen, M. A., F.-S. Li, A. B. van't Wout, D. C. Nickle, D. Shriner, H.-X. He, S. McLaughlin, R. Shankarappa, J. B. Margolick, and J. I. Mullins. 2003. Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences. J. Virol. 77:13376-13388.
-
(2003)
J. Virol.
, vol.77
, pp. 13376-13388
-
-
Jensen, M.A.1
Li, F.-S.2
Van't Wout, A.B.3
Nickle, D.C.4
Shriner, D.5
He, H.-X.6
McLaughlin, S.7
Shankarappa, R.8
Margolick, J.B.9
Mullins, J.I.10
-
30
-
-
0036337415
-
Direct and quantitative single-cell analysis of human immunodeficiency virus type 1 reactivation from latency
-
Kutsch, O., E. N. Benveniste, G. M. Shaw, and D. N. Levy. 2002. Direct and quantitative single-cell analysis of human immunodeficiency virus type 1 reactivation from latency. J. Virol. 76:8776-8786.
-
(2002)
J. Virol.
, vol.76
, pp. 8776-8786
-
-
Kutsch, O.1
Benveniste, E.N.2
Shaw, G.M.3
Levy, D.N.4
-
31
-
-
0032543307
-
Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody
-
Kwong, P. D., R. Wyatt, J. Robinson, R. W. Sweet, J. Sodroski, and W. A. Hendrickson. 1998. Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody. Nature 393:648-659.
-
(1998)
Nature
, vol.393
, pp. 648-659
-
-
Kwong, P.D.1
Wyatt, R.2
Robinson, J.3
Sweet, R.W.4
Sodroski, J.5
Hendrickson, W.A.6
-
32
-
-
0035000767
-
Cooperation of the V1/V2 and V3 domains of human immunodeficiency virus type 1 gp120 for interaction with the CXCR4 receptor
-
Labrosse, B., C. Treboute, A. Brelot, and M. Alizon. 2001. Cooperation of the V1/V2 and V3 domains of human immunodeficiency virus type 1 gp120 for interaction with the CXCR4 receptor. J. Virol. 75:5457-5464.
-
(2001)
J. Virol.
, vol.75
, pp. 5457-5464
-
-
Labrosse, B.1
Treboute, C.2
Brelot, A.3
Alizon, M.4
-
33
-
-
0029842064
-
A model for alignment of Env V1 and V2 hypervariable domains from human and simian immunodeficiency viruses
-
Lamers, S. L., J. W. Sleasman, and M. M. Goodenow. 1996. A model for alignment of Env V1 and V2 hypervariable domains from human and simian immunodeficiency viruses. AIDS Res. Hum. Retrovir. 12:1169-1178.
-
(1996)
AIDS Res. Hum. Retrovir.
, vol.12
, pp. 1169-1178
-
-
Lamers, S.L.1
Sleasman, J.W.2
Goodenow, M.M.3
-
34
-
-
0028057280
-
Persistence of multiple maternal genotypes of human immunodeficiency virus type I in infants infected by vertical transmission
-
Lamers, S. L., J. W. Sleasman, J. X. She, K. A. Barrie, S. M. Pomeroy, D. J. Barrett, and M. M. Goodenow. 1994. Persistence of multiple maternal genotypes of human immunodeficiency virus type I in infants infected by vertical transmission. J. Clin. Investig. 93:380-390.
-
(1994)
J. Clin. Investig.
, vol.93
, pp. 380-390
-
-
Lamers, S.L.1
Sleasman, J.W.2
She, J.X.3
Barrie, K.A.4
Pomeroy, S.M.5
Barrett, D.J.6
Goodenow, M.M.7
-
35
-
-
0033635083
-
Co-receptor usage was more predictive than NSI/SI phenotype for HIV replication in macrophages: Is NSI/SI phenotyping sufficient?
-
Lathey, J. L., D. Brambilla, M. M. Goodenow, M. Nokta, S. Rasheed, E. B. Siwak, J. W. Bremer, D. D. Huang, Y. Yi, P. S. Reichelderfer, and R. G. Collman. 2000. Co-receptor usage was more predictive than NSI/SI phenotype for HIV replication in macrophages: is NSI/SI phenotyping sufficient? J. Leukoc. Biol. 68:324-330.
-
(2000)
J. Leukoc. Biol.
, vol.68
, pp. 324-330
-
-
Lathey, J.L.1
Brambilla, D.2
Goodenow, M.M.3
Nokta, M.4
Rasheed, S.5
Siwak, E.B.6
Bremer, J.W.7
Huang, D.D.8
Yi, Y.9
Reichelderfer, P.S.10
Collman, R.G.11
-
36
-
-
0347951397
-
Macrophage activation through CCR5- and CXCR4-mediated gp120-elicited signaling pathways
-
Lee, C., Q. H. Liu, B. Tomkowicz, Y. Yi, B. D. Freedman, and R. G. Collman. 2003. Macrophage activation through CCR5- and CXCR4-mediated gp120-elicited signaling pathways. J. Leukoc. Biol. 74:676-682.
-
(2003)
J. Leukoc. Biol.
, vol.74
, pp. 676-682
-
-
Lee, C.1
Liu, Q.H.2
Tomkowicz, B.3
Yi, Y.4
Freedman, B.D.5
Collman, R.G.6
-
37
-
-
0033541941
-
Identification of determinants of interaction between CXCR4 and gp120 of a dual-tropic HIV-1DH12 isolate
-
Lee, M. K., J. Heaton, and M. W. Cho. 1999. Identification of determinants of interaction between CXCR4 and gp120 of a dual-tropic HIV-1DH12 isolate. Virology 257:290-296.
-
(1999)
Virology
, vol.257
, pp. 290-296
-
-
Lee, M.K.1
Heaton, J.2
Cho, M.W.3
-
38
-
-
0032731642
-
Persistent CCR5 utilization and enhanced macrophage tropism by primary blood human immunodeficiency virus type 1 isolates from advanced stages of disease and comparison to tissue-derived isolates
-
Li, S., J. Juarez, M. Alali, D. Dwyer, R. Collman, A. Cunningham, and H. M. Naif. 1999. Persistent CCR5 utilization and enhanced macrophage tropism by primary blood human immunodeficiency virus type 1 isolates from advanced stages of disease and comparison to tissue-derived isolates. J. Virol. 73:9741-9755.
-
(1999)
J. Virol.
, vol.73
, pp. 9741-9755
-
-
Li, S.1
Juarez, J.2
Alali, M.3
Dwyer, D.4
Collman, R.5
Cunningham, A.6
Naif, H.M.7
-
39
-
-
0023028190
-
The T4 gene encodes the AIDS virus receptor and is expressed in the immune system and the brain
-
Maddon, P. J., A. G. Dalgleish, J. S. McDougal, P. R. Clapham, R. A. Weiss, and R. Axel. 1986. The T4 gene encodes the AIDS virus receptor and is expressed in the immune system and the brain. Cell 47:333-348.
-
(1986)
Cell
, vol.47
, pp. 333-348
-
-
Maddon, P.J.1
Dalgleish, A.G.2
McDougal, J.S.3
Clapham, P.R.4
Weiss, R.A.5
Axel, R.6
-
40
-
-
0031024664
-
Inhibition of human immunodeficiency virus fusion by a monoclonal antibody to a coreceptor (CXCR4) is both cell type and virus strain dependent
-
McKnight, A., D. Wilkinson, G. Simmons, S. Talbot, L. Picard, M. Ahuja, M. Marsh, J. A. Hoxie, and P. R. Clapham. 1997. Inhibition of human immunodeficiency virus fusion by a monoclonal antibody to a coreceptor (CXCR4) is both cell type and virus strain dependent. J. Virol. 71:1692-1696.
-
(1997)
J. Virol.
, vol.71
, pp. 1692-1696
-
-
McKnight, A.1
Wilkinson, D.2
Simmons, G.3
Talbot, S.4
Picard, L.5
Ahuja, M.6
Marsh, M.7
Hoxie, J.A.8
Clapham, P.R.9
-
41
-
-
0034881228
-
Human immunodeficiency virus type 1 IIIB selected for replication in vivo exhibits increased envelope glycoproteins in virions without alteration in coreceptor usage: Separation of in vivo replication from macrophage tropism
-
Miller, E. D., K. M. Duus, M. Townsend, Y. Yi, R. Collman, M. Reitz, and L. Su. 2001. Human immunodeficiency virus type 1 IIIB selected for replication in vivo exhibits increased envelope glycoproteins in virions without alteration in coreceptor usage: separation of in vivo replication from macrophage tropism. J. Virol. 75:8498-8506.
-
(2001)
J. Virol.
, vol.75
, pp. 8498-8506
-
-
Miller, E.D.1
Duus, K.M.2
Townsend, M.3
Yi, Y.4
Collman, R.5
Reitz, M.6
Su, L.7
-
42
-
-
0033646431
-
CXCR4: Chemokine receptor extraordinaire
-
Murdoch, C. 2000. CXCR4: chemokine receptor extraordinaire. Immunol. Rev. 177:175-184.
-
(2000)
Immunol. Rev.
, vol.177
, pp. 175-184
-
-
Murdoch, C.1
-
43
-
-
0036121120
-
A human immunodeficiency virus type 1 isolate from an infected person homozygous for CCR5Δ32 exhibits dual tropism by infecting macrophages and MT2 cells via CXCR4
-
Naif, H. M., A. L. Cunningham, M. Alali, S. Li, N. Nasr, M. M. Buhler, D. Schols, E. de Clercq, and G. Stewart. 2002. A human immunodeficiency virus type 1 isolate from an infected person homozygous for CCR5Δ32 exhibits dual tropism by infecting macrophages and MT2 cells via CXCR4. J. Virol. 76:3114-3124.
-
(2002)
J. Virol.
, vol.76
, pp. 3114-3124
-
-
Naif, H.M.1
Cunningham, A.L.2
Alali, M.3
Li, S.4
Nasr, N.5
Buhler, M.M.6
Schols, D.7
De Clercq, E.8
Stewart, G.9
-
44
-
-
0031710046
-
Mapping of epitopes exposed on intact human immunodeficiency virus type 1 (HIV-1) virions: A new strategy for studying the immunologic relatedness of HIV-1
-
Nyambi, P. N., M. K. Gorny, L. Bastiani, G. van der Groen, C. Williams, and S. Zolla-Pazner. 1998. Mapping of epitopes exposed on intact human immunodeficiency virus type 1 (HIV-1) virions: a new strategy for studying the immunologic relatedness of HIV-1. J. Virol. 72:9384-9391.
-
(1998)
J. Virol.
, vol.72
, pp. 9384-9391
-
-
Nyambi, P.N.1
Gorny, M.K.2
Bastiani, L.3
Van Der Groen, G.4
Williams, C.5
Zolla-Pazner, S.6
-
45
-
-
0034974149
-
N-linked glycosylation sites adjacent to and within the V1/V2 and the V3 loops of dualtropic human immunodeficiency virus type 1 isolate DH12 gp120 affect coreceptor usage and cellular tropism
-
Ogert, R. A., M. K. Lee, W. Ross, A. Buckler-White, M. A. Martin, and M. W. Cho. 2001. N-linked glycosylation sites adjacent to and within the V1/V2 and the V3 loops of dualtropic human immunodeficiency virus type 1 isolate DH12 gp120 affect coreceptor usage and cellular tropism. J. Virol. 75:5998-6006.
-
(2001)
J. Virol.
, vol.75
, pp. 5998-6006
-
-
Ogert, R.A.1
Lee, M.K.2
Ross, W.3
Buckler-White, A.4
Martin, M.A.5
Cho, M.W.6
-
46
-
-
0035865851
-
Human immunodeficiency virus type 1 protease genotype predicts immune and viral responses to combination therapy with protease inhibitors (PIs) in PI-naive patients
-
Perez, E. E., S. L. Rose, B. Peyser, S. L. Lamers, B. Burkhardt, B. M. Dunn, A. D. Hutson, J. W. Sleasman, and M. M. Goodenow. 2001. Human immunodeficiency virus type 1 protease genotype predicts immune and viral responses to combination therapy with protease inhibitors (PIs) in PI-naive patients. J. Infect. Dis. 183:579-588.
-
(2001)
J. Infect. Dis.
, vol.183
, pp. 579-588
-
-
Perez, E.E.1
Rose, S.L.2
Peyser, B.3
Lamers, S.L.4
Burkhardt, B.5
Dunn, B.M.6
Hutson, A.D.7
Sleasman, J.W.8
Goodenow, M.M.9
-
47
-
-
0032789087
-
Characterization of V3 sequence heterogeneity in subtype C human immunodeficiency virus type 1 isolates from Malawi: Underrepresentation of X4 variants
-
Ping, L. H., J. A. Nelson, I. F. Hoffman, J. Schock, S. L. Lamers, M. Goodman, P. Vernazza, P. Kazembe, M. Maida, D. Zimba, M. M. Goodenow, J. J. Eron, Jr., S. A. Fiscus, M. S. Cohen, and R. Swanstrom. 1999. Characterization of V3 sequence heterogeneity in subtype C human immunodeficiency virus type 1 isolates from Malawi: underrepresentation of X4 variants. J. Virol. 73:6271-6281.
-
(1999)
J. Virol.
, vol.73
, pp. 6271-6281
-
-
Ping, L.H.1
Nelson, J.A.2
Hoffman, I.F.3
Schock, J.4
Lamers, S.L.5
Goodman, M.6
Vernazza, P.7
Kazembe, P.8
Maida, M.9
Zimba, D.10
Goodenow, M.M.11
Eron Jr., J.J.12
Fiscus, S.A.13
Cohen, M.S.14
Swanstrom, R.15
-
48
-
-
2342644898
-
The V1/V2 domain of gp120 is a global regulator of the sensitivity of primary human immunodeficiency virus type 1 isolates to neutralization by antibodies commonly induced upon infection
-
Pinter, A., W. J. Honnen, Y. He, M. K. Gorny, S. Zolla-Pazner, and S. C. Kayman. 2004. The V1/V2 domain of gp120 is a global regulator of the sensitivity of primary human immunodeficiency virus type 1 isolates to neutralization by antibodies commonly induced upon infection. J. Virol. 78:5205-5215.
-
(2004)
J. Virol.
, vol.78
, pp. 5205-5215
-
-
Pinter, A.1
Honnen, W.J.2
He, Y.3
Gorny, M.K.4
Zolla-Pazner, S.5
Kayman, S.C.6
-
49
-
-
0035884899
-
Improved success of phenotype prediction of the human immunodeficiency virus type 1 from envelope variable loop 3 sequence using neural networks
-
Resch, W., N. Hoffman, and R. Swanstrom. 2001. Improved success of phenotype prediction of the human immunodeficiency virus type 1 from envelope variable loop 3 sequence using neural networks. Virology 288:51-62.
-
(2001)
Virology
, vol.288
, pp. 51-62
-
-
Resch, W.1
Hoffman, N.2
Swanstrom, R.3
-
50
-
-
0034080318
-
The biology of chemokines and their receptors
-
Rossi, D., and A. Zlotnik. 2000. The biology of chemokines and their receptors. Annu. Rev. Immunol. 18:217-242.
-
(2000)
Annu. Rev. Immunol.
, vol.18
, pp. 217-242
-
-
Rossi, D.1
Zlotnik, A.2
-
51
-
-
0035261070
-
Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution
-
Salemi, M., K. Strimmer, W. W. Hall, M. Duffy, E. Delaporte, S. Mboup, M. Peeters, and A. M. Vandamme. 2001. Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution. FASEB J. 15:276-278.
-
(2001)
FASEB J.
, vol.15
, pp. 276-278
-
-
Salemi, M.1
Strimmer, K.2
Hall, W.W.3
Duffy, M.4
Delaporte, E.5
Mboup, S.6
Peeters, M.7
Vandamme, A.M.8
-
52
-
-
0026600926
-
Biological phenotype of human immunodeficiency virus type 1 clones at different stages of infection: Progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus population
-
Schuitemaker, H., M. Koot, N. A. Kootstra, M. W. Dercksen, R. E. de Goede, R. P. van Steenwijk, J. M. Lange, J. K. Schattenkerk, F. Miedema, and M. Tersmette. 1992. Biological phenotype of human immunodeficiency virus type 1 clones at different stages of infection: progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus population. J. Virol. 66:1354-1360.
-
(1992)
J. Virol.
, vol.66
, pp. 1354-1360
-
-
Schuitemaker, H.1
Koot, M.2
Kootstra, N.A.3
Dercksen, M.W.4
De Goede, R.E.5
Van Steenwijk, R.P.6
Lange, J.M.7
Schattenkerk, J.K.8
Miedema, F.9
Tersmette, M.10
-
53
-
-
0026089184
-
Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene
-
Shioda, T., J. A. Levy, and C. Cheng-Mayer. 1991. Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene. Nature 349:167-169.
-
(1991)
Nature
, vol.349
, pp. 167-169
-
-
Shioda, T.1
Levy, J.A.2
Cheng-Mayer, C.3
-
54
-
-
0031682566
-
CXCR4 as a functional coreceptor for human immunodeficiency virus type 1 infection of primary macrophages
-
Simmons, G., J. D. Reeves, A. McKnight, N. Dejucq, S. Hibbitts, C. A. Power, E. Aarons, D. Schols, E. De Clercq, A. E. Proudfoot, and P. R. Clapham. 1998. CXCR4 as a functional coreceptor for human immunodeficiency virus type 1 infection of primary macrophages. J. Virol. 72:8453-8457.
-
(1998)
J. Virol.
, vol.72
, pp. 8453-8457
-
-
Simmons, G.1
Reeves, J.D.2
McKnight, A.3
Dejucq, N.4
Hibbitts, S.5
Power, C.A.6
Aarons, E.7
Schols, D.8
De Clercq, E.9
Proudfoot, A.E.10
Clapham, P.R.11
-
55
-
-
10344266976
-
Primary, syncytium-inducing human immunodeficiency virus type 1 isolates are dual-tropic and most can use either Lestr or CCR5 as coreceptors for virus entry
-
Simmons, G., D. Wilkinson, J. D. Reeves, M. T. Dittmar, S. Beddows, J. Weber, G. Carnegie, U. Desselberger, P. W. Gray, R. A. Weiss, and P. R. Clapham. 1996. Primary, syncytium-inducing human immunodeficiency virus type 1 isolates are dual-tropic and most can use either Lestr or CCR5 as coreceptors for virus entry. J. Virol. 70:8355-8360.
-
(1996)
J. Virol.
, vol.70
, pp. 8355-8360
-
-
Simmons, G.1
Wilkinson, D.2
Reeves, J.D.3
Dittmar, M.T.4
Beddows, S.5
Weber, J.6
Carnegie, G.7
Desselberger, U.8
Gray, P.W.9
Weiss, R.A.10
Clapham, P.R.11
-
56
-
-
0033775934
-
Heterogeneous spectrum of coreceptor usage among variants within a dualtropic human immunodeficiency virus type 1 primary-isolate quasispecies
-
Singh, A., and R. G. Collman. 2000. Heterogeneous spectrum of coreceptor usage among variants within a dualtropic human immunodeficiency virus type 1 primary-isolate quasispecies. J. Virol. 74:10229-10235.
-
(2000)
J. Virol.
, vol.74
, pp. 10229-10235
-
-
Singh, A.1
Collman, R.G.2
-
57
-
-
0030806702
-
Immunomagnetic selection of purified monocyte and lymphocyte populations from peripheral blood mononuclear cells following cryopreservation
-
Sleasman, J. W., B. H. Leon, L. F. Aleixo, M. Rojas, and M. M. Goodenow. 1997. Immunomagnetic selection of purified monocyte and lymphocyte populations from peripheral blood mononuclear cells following cryopreservation. Clin. Diagn. Lab. Immunol. 4:653-658.
-
(1997)
Clin. Diagn. Lab. Immunol.
, vol.4
, pp. 653-658
-
-
Sleasman, J.W.1
Leon, B.H.2
Aleixo, L.F.3
Rojas, M.4
Goodenow, M.M.5
-
58
-
-
0031978550
-
Determinants of entry cofactor utilization and tropism in a dualtropic human immunodeficiency virus type 1 primary isolate
-
Smyth, R. J., Y. Yi, A. Singh, and R. G. Collman. 1998. Determinants of entry cofactor utilization and tropism in a dualtropic human immunodeficiency virus type 1 primary isolate J. Virol. 72:4478-4484.
-
(1998)
J. Virol.
, vol.72
, pp. 4478-4484
-
-
Smyth, R.J.1
Yi, Y.2
Singh, A.3
Collman, R.G.4
-
59
-
-
0028084734
-
Clinical significance of human immunodeficiency virus type 1 phenotypes in infected children
-
Spencer, L. T., M. T. Ogino, W. M. Dankner, and S. A. Spector. 1994. Clinical significance of human immunodeficiency virus type 1 phenotypes in infected children. J. Infect. Dis. 169:491-495.
-
(1994)
J. Infect. Dis.
, vol.169
, pp. 491-495
-
-
Spencer, L.T.1
Ogino, M.T.2
Dankner, W.M.3
Spector, S.A.4
-
60
-
-
0019841962
-
Expression of the mouse dihydrofolate reductase complementary deoxyribonucleic acid in simian virus 40 vectors
-
Subramani, S., R. Mulligan, and P. Berg. 1981. Expression of the mouse dihydrofolate reductase complementary deoxyribonucleic acid in simian virus 40 vectors. Mol. Cell. Biol. 1:854-864.
-
(1981)
Mol. Cell. Biol.
, vol.1
, pp. 854-864
-
-
Subramani, S.1
Mulligan, R.2
Berg, P.3
-
61
-
-
0028013177
-
Improved sensitivity of profile searches through the use of sequence weights and gap excision
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. Improved sensitivity of profile searches through the use of sequence weights and gap excision. Comput. Appl. Biosci. 10:19-29.
-
(1994)
Comput. Appl. Biosci.
, vol.10
, pp. 19-29
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
62
-
-
0034960174
-
Molecular basis for cell tropism of CXCR4-dependent human immunodeficiency virus type 1 isolates
-
Tokunaga, K., M. L. Greenberg, M. A. Morse, R. I. Cumming, H. K. Lyerly, and B. R. Cullen. 2001. Molecular basis for cell tropism of CXCR4-dependent human immunodeficiency virus type 1 isolates. J. Virol. 75:6776-6785.
-
(2001)
J. Virol.
, vol.75
, pp. 6776-6785
-
-
Tokunaga, K.1
Greenberg, M.L.2
Morse, M.A.3
Cumming, R.I.4
Lyerly, H.K.5
Cullen, B.R.6
-
63
-
-
0036204526
-
Increased replication of non-syncytium-inducing HIV type 1 isolates in monocyte-derived macrophages is linked to advanced disease in infected children
-
Tuttle, D. L., C. B. Anders, M. J. Aquino-De Jesus, P. P. Poole, S. L. Lamers, D. R. Briggs, S. M. Pomeroy, L. Alexander, K. W. Peden, W. A. Andiman, J. W. Sleasman, and M. M. Goodenow. 2002. Increased replication of non-syncytium-inducing HIV type 1 isolates in monocyte-derived macrophages is linked to advanced disease in infected children. AIDS Res. Hum. Retrovir. 18:353-362.
-
(2002)
AIDS Res. Hum. Retrovir.
, vol.18
, pp. 353-362
-
-
Tuttle, D.L.1
Anders, C.B.2
Aquino-De Jesus, M.J.3
Poole, P.P.4
Lamers, S.L.5
Briggs, D.R.6
Pomeroy, S.M.7
Alexander, L.8
Peden, K.W.9
Andiman, W.A.10
Sleasman, J.W.11
Goodenow, M.M.12
-
64
-
-
1842607079
-
Effects of human immunodeficiency virus type 1 infection on CCR5 and CXCR4 coreceptor expression on CD4 T lymphocyte subsets in infants and adolescents
-
Tuttle, D. L., C. R. Coberley, X. Xie, Z. C. Kou, J. W. Sleasman, and M. M. Goodenow. 2004. Effects of human immunodeficiency virus type 1 infection on CCR5 and CXCR4 coreceptor expression on CD4 T lymphocyte subsets in infants and adolescents. AIDS Res. Hum. Retrovir. 20:305-313.
-
(2004)
AIDS Res. Hum. Retrovir.
, vol.20
, pp. 305-313
-
-
Tuttle, D.L.1
Coberley, C.R.2
Xie, X.3
Kou, Z.C.4
Sleasman, J.W.5
Goodenow, M.M.6
-
65
-
-
0031901134
-
Expression of CCR5 increases during monocyte differentiation and directly mediates macrophage susceptibility to infection by human immunodeficiency virus type 1
-
Tuttle, D. L., J. K. Harrison, C. Anders, J. W. Sleasman, and M. M. Goodenow. 1998. Expression of CCR5 increases during monocyte differentiation and directly mediates macrophage susceptibility to infection by human immunodeficiency virus type 1. J. Virol. 72:4962-4969.
-
(1998)
J. Virol.
, vol.72
, pp. 4962-4969
-
-
Tuttle, D.L.1
Harrison, J.K.2
Anders, C.3
Sleasman, J.W.4
Goodenow, M.M.5
-
66
-
-
0035139777
-
Chemokine-receptor activation by env determines the mechanism of death in HIV-infected and uninfected T lymphocytes
-
Vlahakis, S. R., A. Algeciras-Schimnich, G. Bou, C. J. Heppelmann, A. Villasis-Keever, R. C. Collman, and C. V. Paya. 2001. Chemokine-receptor activation by env determines the mechanism of death in HIV-infected and uninfected T lymphocytes. J. Clin. Investig. 107:207-215.
-
(2001)
J. Clin. Investig.
, vol.107
, pp. 207-215
-
-
Vlahakis, S.R.1
Algeciras-Schimnich, A.2
Bou, G.3
Heppelmann, C.J.4
Villasis-Keever, A.5
Collman, R.C.6
Paya, C.V.7
-
67
-
-
0037111201
-
G protein-coupled chemokine receptors induce both survival and apoptotic signaling pathways
-
Vlahakis, S. R., A. Villasis-Keever, T. Gomez, M. Vanegas, N. Vlahakis, and C. V. Paya. 2002. G protein-coupled chemokine receptors induce both survival and apoptotic signaling pathways. J. Immunol. 169:5546-5554.
-
(2002)
J. Immunol.
, vol.169
, pp. 5546-5554
-
-
Vlahakis, S.R.1
Villasis-Keever, A.2
Gomez, T.3
Vanegas, M.4
Vlahakis, N.5
Paya, C.V.6
-
68
-
-
0030987288
-
CCR5 levels and expression pattern correlate with infectability by macrophage-tropic HIV-1, in vitro
-
Wu, L., W. A. Paxton, N. Kassam, N. Ruffing, J. B. Rottman, N. Sullivan, H. Choe, J. Sodroski, W. Newman, R. A. Koup, and C. R. Mackay. 1997. CCR5 levels and expression pattern correlate with infectability by macrophage-tropic HIV-1, in vitro. J. Exp. Med. 185:1681-1691.
-
(1997)
J. Exp. Med.
, vol.185
, pp. 1681-1691
-
-
Wu, L.1
Paxton, W.A.2
Kassam, N.3
Ruffing, N.4
Rottman, J.B.5
Sullivan, N.6
Choe, H.7
Sodroski, J.8
Newman, W.9
Koup, R.A.10
Mackay, C.R.11
-
69
-
-
0032837825
-
Role of CXCR4 in cell-cell fusion and infection of monocyte-derived macrophages by primary human immunodeficiency virus type 1 (HIV-1) strains: Two distinct mechanisms of HIV-1 dual tropism
-
Yi, Y., S. N. Isaacs, D. A. Williams, I. Frank, D. Schols, E. De Clercq, D. L. Kolson, and R. G. Collman. 1999. Role of CXCR4 in cell-cell fusion and infection of monocyte-derived macrophages by primary human immunodeficiency virus type 1 (HIV-1) strains: two distinct mechanisms of HIV-1 dual tropism. J. Virol. 73:7117-7125.
-
(1999)
J. Virol.
, vol.73
, pp. 7117-7125
-
-
Yi, Y.1
Isaacs, S.N.2
Williams, D.A.3
Frank, I.4
Schols, D.5
De Clercq, E.6
Kolson, D.L.7
Collman, R.G.8
-
70
-
-
13744249284
-
Preferential use of CXCR4 by R5X4 human immunodeficiency virus type 1 isolates for infection of primary lymphocytes
-
Yi, Y., F. Shaheen, and R. G. Collman. 2005. Preferential use of CXCR4 by R5X4 human immunodeficiency virus type 1 isolates for infection of primary lymphocytes. J. Virol. 79:1480-1486.
-
(2005)
J. Virol.
, vol.79
, pp. 1480-1486
-
-
Yi, Y.1
Shaheen, F.2
Collman, R.G.3
-
71
-
-
0032507962
-
Function of the chemokine receptor CXCR4 in haematopoiesis and in cerebellar development
-
Zou, Y. R., A. H. Kottmann, M. Kuroda, I. Taniuchi, and D. R. Littman. 1998. Function of the chemokine receptor CXCR4 in haematopoiesis and in cerebellar development. Nature 393:595-599.
-
(1998)
Nature
, vol.393
, pp. 595-599
-
-
Zou, Y.R.1
Kottmann, A.H.2
Kuroda, M.3
Taniuchi, I.4
Littman, D.R.5
|