메뉴 건너뛰기




Volumn 5, Issue , 2005, Pages

Characterization of the linkage disequilibrium structure and identification of tagging-SNPs in five DNA repair genes

Author keywords

[No Author keywords available]

Indexed keywords

ATM PROTEIN; RAD50 PROTEIN; TUMOR PROTEIN; CELL CYCLE PROTEIN; DNA BINDING PROTEIN; MRE11A PROTEIN, HUMAN; NBN PROTEIN, HUMAN; NUCLEAR PROTEIN; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; PROTEIN SERINE THREONINE KINASE; RAD50 PROTEIN, HUMAN; TUMOR SUPPRESSOR PROTEIN; XRCC4 PROTEIN, HUMAN;

EID: 26844502442     PISSN: 14712407     EISSN: 14712407     Source Type: Journal    
DOI: 10.1186/1471-2407-5-99     Document Type: Article
Times cited : (11)

References (50)
  • 10
    • 0042387804 scopus 로고    scopus 로고
    • Selection and evaluation of tagging SNPs in the neuronal-sodium-channel gene SCN1A: Implications for linkage-disequilibrium gene mapping
    • Weale ME, Depondt C, Macdonald SJ, Smith A, Lai PS, Shorvon SD, Wood NW, Goldstein DB: Selection and evaluation of tagging SNPs in the neuronal-sodium-channel gene SCN1A: implications for linkage-disequilibrium gene mapping. Am J Hum Genet 2003, 73:551-565.
    • (2003) Am. J. Hum. Genet. , vol.73 , pp. 551-565
    • Weale, M.E.1    Depondt, C.2    Macdonald, S.J.3    Smith, A.4    Lai, P.S.5    Shorvon, S.D.6    Wood, N.W.7    Goldstein, D.B.8
  • 11
    • 0037311771 scopus 로고    scopus 로고
    • Efficient selective screening of haplotype tag SNPs
    • Ke X, Cardon LR: Efficient selective screening of haplotype tag SNPs. Bioinformatics 2003, 19:287-288.
    • (2003) Bioinformatics , vol.19 , pp. 287-288
    • Ke, X.1    Cardon, L.R.2
  • 12
    • 0038728035 scopus 로고    scopus 로고
    • Selection of genetic markers for association analyses, using linkage disequilibrium and haplotypes
    • Meng Z, Zaykin DV, Xu CF, Wagner M, Ehm MG: Selection of genetic markers for association analyses, using linkage disequilibrium and haplotypes. Am J Hum Genet 2003, 73:115-130.
    • (2003) Am. J. Hum. Genet. , vol.73 , pp. 115-130
    • Meng, Z.1    Zaykin, D.V.2    Xu, C.F.3    Wagner, M.4    Ehm, M.G.5
  • 13
    • 0347362608 scopus 로고    scopus 로고
    • Principal component analysis for selection of optimal SNP-sets that capture intragenic genetic variation
    • Horne BD, Camp NJ: Principal component analysis for selection of optimal SNP-sets that capture intragenic genetic variation. Genet Epidemiol 2004, 26:11-21.
    • (2004) Genet. Epidemiol. , vol.26 , pp. 11-21
    • Horne, B.D.1    Camp, N.J.2
  • 14
    • 0346373654 scopus 로고    scopus 로고
    • Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium
    • Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA: Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium. Am J Hum Genet 2004, 74:106-120.
    • (2004) Am. J. Hum. Genet. , vol.74 , pp. 106-120
    • Carlson, C.S.1    Eberle, M.A.2    Rieder, M.J.3    Yi, Q.4    Kruglyak, L.5    Nickerson, D.A.6
  • 15
    • 15544380207 scopus 로고    scopus 로고
    • Characterization of linkage disequilibrium structure, mutation history, and tagging SNPs, and their use in association analyses: ELAC2 and familial early-onset prostate cancer
    • Camp NJ, Swensen J, Horne BD, Farnham JM, Thomas A, Cannon-Albright LA, Tavtigian SV: Characterization of linkage disequilibrium structure, mutation history, and tagging SNPs, and their use in association analyses: ELAC2 and familial early-onset prostate cancer. Genet Epidemiol 2004, 28:232-243.
    • (2004) Genet. Epidemiol. , vol.28 , pp. 232-243
    • Camp, N.J.1    Swensen, J.2    Horne, B.D.3    Farnham, J.M.4    Thomas, A.5    Cannon-Albright, L.A.6    Tavtigian, S.V.7
  • 16
    • 6344233909 scopus 로고    scopus 로고
    • Finding haplotype tagging SNPs by use of principal components analysis
    • Lin Z, Altman RB: Finding haplotype tagging SNPs by use of principal components analysis. Am J Hum Genet 2004, 75:850-861.
    • (2004) Am. J. Hum. Genet. , vol.75 , pp. 850-861
    • Lin, Z.1    Altman, R.B.2
  • 17
    • 1842539516 scopus 로고    scopus 로고
    • A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other
    • Nyholt DR: A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other. Am J Hum Genet 2004, 74:765-769.
    • (2004) Am. J. Hum. Genet. , vol.74 , pp. 765-769
    • Nyholt, D.R.1
  • 19
    • 0034614637 scopus 로고    scopus 로고
    • The hallmarks of cancer
    • Hanahan D, Weinberg RA: The hallmarks of cancer. Cell 2000, 100:57-70.
    • (2000) Cell , vol.100 , pp. 57-70
    • Hanahan, D.1    Weinberg, R.A.2
  • 20
    • 4644277326 scopus 로고    scopus 로고
    • Xeroderma pigmentosum: From symptoms and genetics to gene-based skin therapy
    • Magnaldo T, Sarasin A: Xeroderma pigmentosum: from symptoms and genetics to gene-based skin therapy. Cells Tissues Organs 2004, 177:189-198.
    • (2004) Cells Tissues Organs , vol.177 , pp. 189-198
    • Magnaldo, T.1    Sarasin, A.2
  • 21
    • 0037390446 scopus 로고    scopus 로고
    • The hereditary nonpolyposis colorectal cancer syndrome: Genetics and clinical implications
    • Chung DC, Rustgi AK: The hereditary nonpolyposis colorectal cancer syndrome: genetics and clinical implications. Ann Intern Med 2003, 138:560-570.
    • (2003) Ann. Intern. Med. , vol.138 , pp. 560-570
    • Chung, D.C.1    Rustgi, A.K.2
  • 22
    • 0035093737 scopus 로고    scopus 로고
    • DNA double-strand breaks: Signaling, repair and the cancer connection
    • Khanna KK, Jackson SP: DNA double-strand breaks: signaling, repair and the cancer connection. Nat Genet 2001, 27:247-254.
    • (2001) Nat. Genet. , vol.27 , pp. 247-254
    • Khanna, K.K.1    Jackson, S.P.2
  • 24
    • 0004036330 scopus 로고
    • The Utah genealogical database: A resource for genetic epidemiology
    • Edited by: Skolnick M. Cold Spring Harbor, NY, Cold Spring Harbor Laboratory Press
    • Skolnick M: The Utah genealogical database: A resource for genetic epidemiology. In Banbury Report No 4: Cancer Incidence in Defined Populations Edited by: Skolnick M. Cold Spring Harbor, NY, Cold Spring Harbor Laboratory Press; 1980.
    • (1980) Banbury Report No 4: Cancer Incidence in Defined Populations
    • Skolnick, M.1
  • 25
    • 26844555083 scopus 로고    scopus 로고
    • Pedigree and Population Resource: Utah Population Database
    • Pedigree and Population Resource: Utah Population Database [http://www.hci.utah.edu/groups/ppr/]
  • 26
    • 15244341292 scopus 로고    scopus 로고
    • Association analyses of DNA methyltransferase-I (DNMT1) polymorphisms with systemic lupus erythematosus
    • Park BL, Kim LH, Shin HD, Park YW, Uhm WS, Bae SC: Association analyses of DNA methyltransferase-I (DNMT1) polymorphisms with systemic lupus erythematosus. J Hum Genet 2004, 49:642-646.
    • (2004) J. Hum. Genet. , vol.49 , pp. 642-646
    • Park, B.L.1    Kim, L.H.2    Shin, H.D.3    Park, Y.W.4    Uhm, W.S.5    Bae, S.C.6
  • 29
    • 3242795791 scopus 로고    scopus 로고
    • Polymorphic variation in the CBLB gene in human type 1 diabetes
    • Kosoy R, Yokoi N, Seino S, Concannon P: Polymorphic variation in the CBLB gene in human type 1 diabetes. Genes Immun 2004, 5:232-235.
    • (2004) Genes Immun. , vol.5 , pp. 232-235
    • Kosoy, R.1    Yokoi, N.2    Seino, S.3    Concannon, P.4
  • 31
    • 0027291689 scopus 로고
    • Allelic discrimination by nicktranslation PCR with fluorogenic probes
    • Lee LG, Connell CR, Bloch W: Allelic discrimination by nicktranslation PCR with fluorogenic probes. Nucleic Acids Res 1993, 21:3761-3766.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 3761-3766
    • Lee, L.G.1    Connell, C.R.2    Bloch, W.3
  • 32
    • 26844522234 scopus 로고    scopus 로고
    • SNPHAP
    • Clayton DG: SNPHAP. [http://www-gene.cimr.cam.ac.uk/clayton/software].
    • Clayton, D.G.1
  • 33
    • 0022472723 scopus 로고
    • Mortality and cancer incidence in 263 patients with ataxia-telangiectasia
    • Morrell D, Cromartie E, Swift M: Mortality and cancer incidence in 263 patients with ataxia-telangiectasia. J Natl Cancer Inst 1986, 77:89-92.
    • (1986) J. Natl. Cancer Inst. , vol.77 , pp. 89-92
    • Morrell, D.1    Cromartie, E.2    Swift, M.3
  • 34
    • 0026409331 scopus 로고
    • Incidence of cancer in 161 families affected by ataxia-telangiectasia
    • Swift M, Morrell D, Massey RB, Chase CL: Incidence of cancer in 161 families affected by ataxia-telangiectasia. N Engl J Med 1991, 325:1831-1836.
    • (1991) N. Engl. J. Med. , vol.325 , pp. 1831-1836
    • Swift, M.1    Morrell, D.2    Massey, R.B.3    Chase, C.L.4
  • 42
    • 0344562925 scopus 로고    scopus 로고
    • Neutral sequence variants and haplotypes at the 150 Kb ataxia-telangiectasia locus
    • Li A, Huang Y, Swift M: Neutral sequence variants and haplotypes at the 150 Kb ataxia-telangiectasia locus. Am J Med Genet 1999, 86:140-144.
    • (1999) Am. J. Med. Genet. , vol.86 , pp. 140-144
    • Li, A.1    Huang, Y.2    Swift, M.3
  • 43
    • 0033658948 scopus 로고    scopus 로고
    • Haplotypes at ATM identify coding-sequence variation and indicate a region of extensive linkage disequilibrium
    • Bonnen PE, Story MD, Ashorn CL, Buchholz TA, Weil MM, Nelson DL: Haplotypes at ATM identify coding-sequence variation and indicate a region of extensive linkage disequilibrium. Am J Hum Genet 2000, 67:1437-1451.
    • (2000) Am. J. Hum. Genet. , vol.67 , pp. 1437-1451
    • Bonnen, P.E.1    Story, M.D.2    Ashorn, C.L.3    Buchholz, T.A.4    Weil, M.M.5    Nelson, D.L.6
  • 47
    • 0344826588 scopus 로고    scopus 로고
    • Haplotype tagging single nucleotide polymorphisms and association studies
    • Thompson D, Stram D, Goldgar D, Witte JS: Haplotype tagging single nucleotide polymorphisms and association studies. Hum Hered 2003, 56:48-55.
    • (2003) Hum. Hered. , vol.56 , pp. 48-55
    • Thompson, D.1    Stram, D.2    Goldgar, D.3    Witte, J.S.4
  • 48
    • 79959503826 scopus 로고    scopus 로고
    • The International HapMap Project
    • The International HapMap Project. Nature 2003, 426:789-796.
    • (2003) Nature , vol.426 , pp. 789-796
  • 49
    • 26844459727 scopus 로고    scopus 로고
    • HapMap
    • HapMap [http://www.hapmap.org/]
  • 50
    • 14944378127 scopus 로고    scopus 로고
    • The effect of SNP marker density on the efficacy of haplotype tagging SNPs - A warning
    • Iles MM: The effect of SNP marker density on the efficacy of haplotype tagging SNPs - a warning. Ann Hum Genet 2005, 69:209-215.
    • (2005) Ann. Hum. Genet. , vol.69 , pp. 209-215
    • Iles, M.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.