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Volumn 26, Issue 1, 2004, Pages 11-21

Principal Component Analysis for Selection of Optimal SNP-Sets That Capture Intragenic Genetic Variation

Author keywords

Association analysis; Group tagging SNP (gtSNP); Haplotype block; Haplotype tagging SNP (htSNP); Linkage disequilibrium

Indexed keywords

ARTICLE; CORRELATION ANALYSIS; GENE LINKAGE DISEQUILIBRIUM; GENETIC ASSOCIATION; GENETIC VARIABILITY; HAPLOTYPE; PRINCIPAL COMPONENT ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 0347362608     PISSN: 07410395     EISSN: None     Source Type: Journal    
DOI: 10.1002/gepi.10292     Document Type: Article
Times cited : (97)

References (24)
  • 2
    • 0025269067 scopus 로고
    • Inference of haplotypes from PCR-amplified samples of diploid populations
    • Clark AG. 1990. Inference of haplotypes from PCR-amplified samples of diploid populations. Mol Biol Evol 7:111-122.
    • (1990) Mol Biol Evol , vol.7 , pp. 111-122
    • Clark, A.G.1
  • 3
    • 0030688004 scopus 로고    scopus 로고
    • Variations on a theme: Cataloging human DNA sequence variation
    • Collins FS, Guyer MS, Charkravarti A. 1997. Variations on a theme: cataloging human DNA sequence variation. Science 278:1580-1581.
    • (1997) Science , vol.278 , pp. 1580-1581
    • Collins, F.S.1    Guyer, M.S.2    Charkravarti, A.3
  • 4
    • 0036137030 scopus 로고    scopus 로고
    • A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: Application to HLA in type 1 diabetes
    • Cordell HJ, Clayton DG. 2002. A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: application to HLA in type 1 diabetes. Am J Hum Genet 70:124-141.
    • (2002) Am J Hum Genet , vol.70 , pp. 124-141
    • Cordell, H.J.1    Clayton, D.G.2
  • 5
    • 0031961076 scopus 로고    scopus 로고
    • An analysis of linkage disequilibrium in the interleukin-1 gene cluster, using a novel grouping method for multiallelic markers
    • Cox A, Camp NJ, Nicklin MJH, di Giovine FS, Duff GW. 1998. An analysis of linkage disequilibrium in the interleukin-1 gene cluster, using a novel grouping method for multiallelic markers. Am J Hum Genet 62:1180-1188.
    • (1998) Am J Hum Genet , vol.62 , pp. 1180-1188
    • Cox, A.1    Camp, N.J.2    Nicklin, M.J.H.3    Di Giovine, F.S.4    Duff, G.W.5
  • 7
    • 0029130796 scopus 로고
    • Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population
    • Excoffier L, Slatkin M. 1995. Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population. Mol Biol Evol 12:921-927.
    • (1995) Mol Biol Evol , vol.12 , pp. 921-927
    • Excoffier, L.1    Slatkin, M.2
  • 12
    • 0037311771 scopus 로고    scopus 로고
    • Efficient selective screening of haplotype tag SNPs
    • Ke X, Cardon LR. 2003. Efficient selective screening of haplotype tag SNPs. Bioinformatics 19:287-288.
    • (2003) Bioinformatics , vol.19 , pp. 287-288
    • Ke, X.1    Cardon, L.R.2
  • 13
    • 0029805706 scopus 로고    scopus 로고
    • The new genomics: Global views of biology
    • Lander ES. 1996. The new genomics: global views of biology. Science 274:536-539.
    • (1996) Science , vol.274 , pp. 536-539
    • Lander, E.S.1
  • 14
    • 0038728035 scopus 로고    scopus 로고
    • Selection of genetic markers for association analysis, using linkage disequilibrium and haplotypes
    • Meng Z, Zaykin DV, Xu CF, Wagner M, Ehm MG. 2003. Selection of genetic markers for association analysis, using linkage disequilibrium and haplotypes. Am J Hum Genet 73:115-130.
    • (2003) Am J Hum Genet , vol.73 , pp. 115-130
    • Meng, Z.1    Zaykin, D.V.2    Xu, C.F.3    Wagner, M.4    Ehm, M.G.5
  • 17
    • 0029741063 scopus 로고    scopus 로고
    • The future of genetic studies of complex human diseases
    • Risch N, Merikangas K. 1996. The future of genetic studies of complex human diseases. Science 273:1516-1517.
    • (1996) Science , vol.273 , pp. 1516-1517
    • Risch, N.1    Merikangas, K.2
  • 18
    • 0034660559 scopus 로고    scopus 로고
    • Searching for genetic determinants in the new millennium
    • Risch NJ. 2000. Searching for genetic determinants in the new millennium. Nature 405:847-856.
    • (2000) Nature , vol.405 , pp. 847-856
    • Risch, N.J.1
  • 20
    • 0043175289 scopus 로고    scopus 로고
    • Choosing haplotype-tagging SNPs based on unphased genotype data from a preliminary sample of unrelated subjects with an example from the Multiethnic Cohort Study
    • Stram DO, Haiman CA, Hirschhorn JN, Altshuler D, Kolonel LN, Henderson BE, Pike MC. 2003. Choosing haplotype-tagging SNPs based on unphased genotype data from a preliminary sample of unrelated subjects with an example from the Multiethnic Cohort Study. Hum Hered 55:27-36.
    • (2003) Hum Hered , vol.55 , pp. 27-36
    • Stram, D.O.1    Haiman, C.A.2    Hirschhorn, J.N.3    Altshuler, D.4    Kolonel, L.N.5    Henderson, B.E.6    Pike, M.C.7
  • 21
    • 0036255811 scopus 로고    scopus 로고
    • Candidate-gene approaches for studying complex genetic traits: Practical considerations
    • Tabor HK, Risch NJ, Myers RM. 2002. Candidate-gene approaches for studying complex genetic traits: practical considerations. Nat Rev 3:391-397.
    • (2002) Nat Rev , vol.3 , pp. 391-397
    • Tabor, H.K.1    Risch, N.J.2    Myers, R.M.3
  • 23
    • 0037480726 scopus 로고    scopus 로고
    • HaploBlockFinder: Haplotype block analyses
    • Zhang K, Jin L. 2003. HaploBlockFinder: haplotype block analyses. Bioinformatics 19:1300-1301.
    • (2003) Bioinformatics , vol.19 , pp. 1300-1301
    • Zhang, K.1    Jin, L.2
  • 24
    • 0032779692 scopus 로고    scopus 로고
    • Assessing linkage disequilibrium in a complex genetic system I. Overall deviation from random association
    • Zhao H, Pakstis AJ, Kidd JR, Kidd KK. 1999. Assessing linkage disequilibrium in a complex genetic system I. Overall deviation from random association. Ann Hum Genet 63:167-179.
    • (1999) Ann Hum Genet , vol.63 , pp. 167-179
    • Zhao, H.1    Pakstis, A.J.2    Kidd, J.R.3    Kidd, K.K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.