-
1
-
-
0029156641
-
Gene cloning, sequencing, expression, and characterization of the Sac7 DNA-binding proteins from the extremely thermophilic archaeon Sulfolobus acidocaldarius
-
McAfee, J., Edmondson, S., Datta, P., Shriver, J., and Gupta, R. (1995) Gene cloning, sequencing, expression, and characterization of the Sac7 DNA-binding proteins from the extremely thermophilic archaeon Sulfolobus acidocaldarius, Biochemistry 34, 10063-10077.
-
(1995)
Biochemistry
, vol.34
, pp. 10063-10077
-
-
McAfee, J.1
Edmondson, S.2
Datta, P.3
Shriver, J.4
Gupta, R.5
-
2
-
-
0029883976
-
Equilibrium DNA binding of Sac7d protein from the hyperthermophile Sulfolobus acidocaldarius: Fluorescence and circular dichroism studies
-
McAfee, J. G., Edmondson, S., Zegar, I., and Shriver, J. W. (1996) Equilibrium DNA binding of Sac7d protein from the hyperthermophile Sulfolobus acidocaldarius: fluorescence and circular dichroism studies, Biochemistry 35, 4034-4045.
-
(1996)
Biochemistry
, vol.35
, pp. 4034-4045
-
-
McAfee, J.G.1
Edmondson, S.2
Zegar, I.3
Shriver, J.W.4
-
3
-
-
0034986024
-
DNA binding proteins Sac7d and Sso7d from Sulfolobus
-
Edmondson, S. P., and Shriver, J. W. (2001) DNA binding proteins Sac7d and Sso7d from Sulfolobus, Methods Enzymol. 334, 129-145.
-
(2001)
Methods Enzymol.
, vol.334
, pp. 129-145
-
-
Edmondson, S.P.1
Shriver, J.W.2
-
4
-
-
0036890204
-
Holding it together: Chromatin in the archaea
-
White, M. F., and Bell, S. D. (2002) Holding it together: chromatin in the archaea, Trends Genet. 18, 621-626.
-
(2002)
Trends Genet.
, vol.18
, pp. 621-626
-
-
White, M.F.1
Bell, S.D.2
-
5
-
-
0038575389
-
Archaeal chromatin and transcription
-
Reeve, J. N. (2003) Archaeal chromatin and transcription, Mol. Microbiol. 48, 587-598.
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 587-598
-
-
Reeve, J.N.1
-
6
-
-
0032510217
-
The hyperthermophile chromosomal protein Sac7d sharply kinks DNA
-
Robinson, H., Gao, Y.-G., McCrary, B. S., Edmondson, S. P., Shriver, J. W. and Wang, A. H.-J. (1998) The hyperthermophile chromosomal protein Sac7d sharply kinks DNA, Nature 392, 202-205.
-
(1998)
Nature
, vol.392
, pp. 202-205
-
-
Robinson, H.1
Gao, Y.-G.2
McCrary, B.S.3
Edmondson, S.P.4
Shriver, J.W.5
Wang, A.H.-J.6
-
7
-
-
0028839434
-
Solution structure of the DNA-binding protein Sac7d from the hyperthermophile Sulfolobus acidocaldarius
-
Edmondson, S. P., Qiu, L., and Shriver, J. W. (1995) Solution structure of the DNA-binding protein Sac7d from the hyperthermophile Sulfolobus acidocaldarius, Biochemistry 34, 13289-13304.
-
(1995)
Biochemistry
, vol.34
, pp. 13289-13304
-
-
Edmondson, S.P.1
Qiu, L.2
Shriver, J.W.3
-
8
-
-
0034984729
-
Calorimetric analyses of hyperthermophile proteins
-
Shriver, J. W., Peters, W. B., Szary, N., Clark, A. T., and Edmondson, S. P. (2001) Calorimetric analyses of hyperthermophile proteins, Methods Enzymol. 334, 389-422.
-
(2001)
Methods Enzymol.
, vol.334
, pp. 389-422
-
-
Shriver, J.W.1
Peters, W.B.2
Szary, N.3
Clark, A.T.4
Edmondson, S.P.5
-
9
-
-
4644342209
-
Thermodynamics of DNA binding and distortion by the hyperthermophile chromatin protein Sac7d
-
Peters, W. B., Edmondson, S. P., and Shriver, J. W. (2004) Thermodynamics of DNA binding and distortion by the hyperthermophile chromatin protein Sac7d, J. Mol. Biol. 343, 339-360.
-
(2004)
J. Mol. Biol.
, vol.343
, pp. 339-360
-
-
Peters, W.B.1
Edmondson, S.P.2
Shriver, J.W.3
-
10
-
-
0032512877
-
Linkage of protonation and anion binding to the folding of Sac7d
-
McCrary, B. S., Bedell, J., Edmondson, S. P., and Shriver, J. W. (1998) Linkage of protonation and anion binding to the folding of Sac7d, J. Mol. Biol. 276, 203-224.
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 203-224
-
-
McCrary, B.S.1
Bedell, J.2
Edmondson, S.P.3
Shriver, J.W.4
-
11
-
-
1542267781
-
Thermodynamics of core hydrophobicity and packing in the hyperthermophile proteins Sac7d and Sso7d
-
Clark, A., McCrary, B. S., Edmondson, S., and Shriver, J. (2004) Thermodynamics of core hydrophobicity and packing in the hyperthermophile proteins Sac7d and Sso7d, Biochemistry 43, 2840-2853.
-
(2004)
Biochemistry
, vol.43
, pp. 2840-2853
-
-
Clark, A.1
McCrary, B.S.2
Edmondson, S.3
Shriver, J.4
-
12
-
-
0030582620
-
Hyperthermophile protein folding thermodynamics: Differential scanning calorimetry and chemical denaturation of Sac7d
-
McCrary, B. S., Edmondson, S. P., and Shriver, J. W. (1996) Hyperthermophile protein folding thermodynamics: differential scanning calorimetry and chemical denaturation of Sac7d, J. Mol. Biol. 264, 784-805.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 784-805
-
-
McCrary, B.S.1
Edmondson, S.P.2
Shriver, J.W.3
-
13
-
-
0014718113
-
Protein denaturation. Part C: Theoretical models for the mechanism of denaturation
-
Tanford, C. (1970) Protein denaturation. Part C: theoretical models for the mechanism of denaturation, Adv. Protein Chem. 24, 1-95.
-
(1970)
Adv. Protein Chem.
, vol.24
, pp. 1-95
-
-
Tanford, C.1
-
14
-
-
0016505899
-
The stability of globular proteins
-
Pace, C. N. (1975) The stability of globular proteins, CRC Crit. Rev. Biochem. 3, 1-43.
-
(1975)
CRC Crit. Rev. Biochem.
, vol.3
, pp. 1-43
-
-
Pace, C.N.1
-
15
-
-
0018588511
-
Stability of proteins. Small globular proteins
-
Privalov, P. (1979) Stability of proteins. Small globular proteins, Adv. Protein Chem. 33, 167-241.
-
(1979)
Adv. Protein Chem.
, vol.33
, pp. 167-241
-
-
Privalov, P.1
-
16
-
-
0023442217
-
Protein stability curves
-
Becktel, W., and Schellman, J. (1987) Protein stability curves, Biopolymers 26, 1859-1877.
-
(1987)
Biopolymers
, vol.26
, pp. 1859-1877
-
-
Becktel, W.1
Schellman, J.2
-
17
-
-
0000826487
-
Biochemical applications of differential scanning calorimetry
-
Sturtevant, J. (1987) Biochemical applications of differential scanning calorimetry, Annu. Rev. Phys. Chem. 38, 463-488.
-
(1987)
Annu. Rev. Phys. Chem.
, vol.38
, pp. 463-488
-
-
Sturtevant, J.1
-
19
-
-
0000159569
-
Protein structure and the energetics of protein stability
-
Robertson, A. D., and Murphy, K. P. (1997) Protein structure and the energetics of protein stability, Chem. Rev. 97, 1251-1267.
-
(1997)
Chem. Rev.
, vol.97
, pp. 1251-1267
-
-
Robertson, A.D.1
Murphy, K.P.2
-
20
-
-
0013943915
-
Validity of the "two-state" hypothesis for conformational transitions of proteins
-
Lumry, R., Biltonen, R., and Brandts, J. (1966) Validity of the "two-state" hypothesis for conformational transitions of proteins, Biopolymers 4, 917-944.
-
(1966)
Biopolymers
, vol.4
, pp. 917-944
-
-
Lumry, R.1
Biltonen, R.2
Brandts, J.3
-
21
-
-
0022555885
-
Determination and analysis of urea and guanidine hydrochloride denaturation curves
-
Pace, C. N. (1986) Determination and analysis of urea and guanidine hydrochloride denaturation curves, Methods Enzymol. 131, 266-280.
-
(1986)
Methods Enzymol.
, vol.131
, pp. 266-280
-
-
Pace, C.N.1
-
22
-
-
0023697408
-
Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl α-chymotrypsin using different denaturants
-
Santoro, M., and Bolen, D. (1988) Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl α-chymotrypsin using different denaturants, Biochemistry 27, 8063-8068.
-
(1988)
Biochemistry
, vol.27
, pp. 8063-8068
-
-
Santoro, M.1
Bolen, D.2
-
23
-
-
0002343673
-
Measuring the conformational stability of a protein
-
(Creighton, T. E., Ed.), IRL Press, New York
-
Pace, C. N., Shirley, B., and Thomson, J. A. (1989) Measuring the conformational stability of a protein, in Protein Structure: A Practical Approach (Creighton, T. E., Ed.) pp 311-330, IRL Press, New York.
-
(1989)
Protein Structure: A Practical Approach
, pp. 311-330
-
-
Pace, C.N.1
Shirley, B.2
Thomson, J.A.3
-
24
-
-
0029166532
-
Thermal denaturation methods in the study of protein folding
-
Freire, E. (1995) Thermal denaturation methods in the study of protein folding, Methods Enzymol. 259, 144-168.
-
(1995)
Methods Enzymol.
, vol.259
, pp. 144-168
-
-
Freire, E.1
-
25
-
-
0000188566
-
Measuring protein thermostability by differential scanning calorimetry
-
John Wiley & Sons, New York
-
Makhatadze, G. (1998) Measuring protein thermostability by differential scanning calorimetry, in Current Protocols in Protein Science, pp 7.9.1-7.9.14, John Wiley & Sons, New York.
-
(1998)
Current Protocols in Protein Science
-
-
Makhatadze, G.1
-
26
-
-
0032876680
-
Protein conformational stabilities can be determined from hydrogen exchange rates
-
Huyghues-Despointes, B. M., Scholtz, J. M., and Pace, C. N. (1999) Protein conformational stabilities can be determined from hydrogen exchange rates, Nat. Struct. Biol. 6, 910-912.
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 910-912
-
-
Huyghues-Despointes, B.M.1
Scholtz, J.M.2
Pace, C.N.3
-
27
-
-
0026734102
-
Two-dimensional differential scanning calorimetry: Simultaneous resolution of intrinsic protein structural energetics and ligand binding interactions by global linkage analysis
-
Straume, M., and Freire, E. (1992) Two-dimensional differential scanning calorimetry: simultaneous resolution of intrinsic protein structural energetics and ligand binding interactions by global linkage analysis, Anal. Biochem. 203, 259-268.
-
(1992)
Anal. Biochem.
, vol.203
, pp. 259-268
-
-
Straume, M.1
Freire, E.2
-
28
-
-
0028067152
-
Protein stability parameters measured by hydrogen exchange
-
Bai, Y., Milne, J. S., Mayne, L., and Englander, S. W. (1994) Protein stability parameters measured by hydrogen exchange, Proteins 20, 4-14.
-
(1994)
Proteins
, vol.20
, pp. 4-14
-
-
Bai, Y.1
Milne, J.S.2
Mayne, L.3
Englander, S.W.4
-
29
-
-
0020855355
-
Hydrogen exchange and structural dynamics of proteins and nucleic acids
-
Englander, W., and Kallenbach, N. (1984) Hydrogen exchange and structural dynamics of proteins and nucleic acids, Q. Rev. Biophys. 16, 521-655.
-
(1984)
Q. Rev. Biophys.
, vol.16
, pp. 521-655
-
-
Englander, W.1
Kallenbach, N.2
-
30
-
-
0029865938
-
Future directions in folding: The multi-state nature of protein structure
-
Bai, Y., and Englander, S. W. (1996) Future directions in folding: the multi-state nature of protein structure, Proteins 24, 145-151.
-
(1996)
Proteins
, vol.24
, pp. 145-151
-
-
Bai, Y.1
Englander, S.W.2
-
31
-
-
0030580089
-
Structure-based calculation of the equilibrium folding pathway of proteins. Correlation with hydrogen exchange protection factors
-
Hilser, V. J., and Freire, E. (1996) Structure-based calculation of the equilibrium folding pathway of proteins. Correlation with hydrogen exchange protection factors, J. Mol. Biol. 262, 756-772.
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 756-772
-
-
Hilser, V.J.1
Freire, E.2
-
32
-
-
0027730340
-
Guanidinium chloride induction of partial unfolding in amide proton exchange in RNase A
-
Mayo, S., and Baldwin, R. L. (1993) Guanidinium chloride induction of partial unfolding in amide proton exchange in RNase A, Science 262, 873-876.
-
(1993)
Science
, vol.262
, pp. 873-876
-
-
Mayo, S.1
Baldwin, R.L.2
-
33
-
-
0029746061
-
Detection of rare partially folded molecules in equilibrium with the native conformation of RNaseH
-
Chamberlain, A. K., Handel, T. M., and Marqusee, S. (1996) Detection of rare partially folded molecules in equilibrium with the native conformation of RNaseH, Nat. Struct. Biol. 3, 782-787.
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 782-787
-
-
Chamberlain, A.K.1
Handel, T.M.2
Marqusee, S.3
-
34
-
-
0030047378
-
Temperature and pH dependence of hydrogen exchange and global stability for ovomucoid third domain
-
Swint-Kruse, L., and Robertson, A. D. (1996) Temperature and pH dependence of hydrogen exchange and global stability for ovomucoid third domain, Biochemistry 35, 171-180.
-
(1996)
Biochemistry
, vol.35
, pp. 171-180
-
-
Swint-Kruse, L.1
Robertson, A.D.2
-
35
-
-
3342993181
-
Hydrogen exchange methods to study protein folding
-
Krishna, M. M., Hoang, L., Lin, Y., and Englander, S. W. (2004) Hydrogen exchange methods to study protein folding, Methods 54, 51-64.
-
(2004)
Methods
, vol.54
, pp. 51-64
-
-
Krishna, M.M.1
Hoang, L.2
Lin, Y.3
Englander, S.W.4
-
36
-
-
0029911695
-
Mechanisms and uses of hydrogen exchange
-
Englander, S. W., Sosnick, T. R., Englander, J. J., and Mayne, L. (1996) Mechanisms and uses of hydrogen exchange, Curr. Opin. Struct. Biol. 6, 18-23.
-
(1996)
Curr. Opin. Struct. Biol.
, vol.6
, pp. 18-23
-
-
Englander, S.W.1
Sosnick, T.R.2
Englander, J.J.3
Mayne, L.4
-
37
-
-
0013994339
-
Hydrogen exchange in proteins
-
Hvidt, A., and Nielsen, S. O. (1966) Hydrogen exchange in proteins, Adv. Protein Chem. 21, 287-386.
-
(1966)
Adv. Protein Chem.
, vol.21
, pp. 287-386
-
-
Hvidt, A.1
Nielsen, S.O.2
-
38
-
-
0022396038
-
Individual amide proton exchange rates in thermally unfolded basic pancreatic trypsin inhibitor
-
Roder, H., Wagner, G., and Wüthrich, K. (1985) Individual amide proton exchange rates in thermally unfolded basic pancreatic trypsin inhibitor, Biochemistry 24, 7407-7411.
-
(1985)
Biochemistry
, vol.24
, pp. 7407-7411
-
-
Roder, H.1
Wagner, G.2
Wüthrich, K.3
-
39
-
-
0034581352
-
Kinetics and thermodynamics of conformational equilibria in native proteins by hydrogen exchange
-
Arrington, C. B., and Robertson, A. D. (2000) Kinetics and thermodynamics of conformational equilibria in native proteins by hydrogen exchange, Methods Enzymol. 323, 104-124.
-
(2000)
Methods Enzymol.
, vol.323
, pp. 104-124
-
-
Arrington, C.B.1
Robertson, A.D.2
-
40
-
-
0028541866
-
15N resonance assignments of the N-terminal SH3 domain of drk in folded and unfolded states using enhanced-sensitivity pulsed field gradient NMR techniques
-
15N resonance assignments of the N-terminal SH3 domain of drk in folded and unfolded states using enhanced-sensitivity pulsed field gradient NMR techniques, J. Biomol. NMR 4, 845-858.
-
(1994)
J. Biomol. NMR
, vol.4
, pp. 845-858
-
-
Zhang, O.1
Kay, L.E.2
Olivier, J.P.3
Forman-Kay, J.D.4
-
41
-
-
0033777462
-
The acid-induced folded state of Sac7d is the native state
-
Bedell, J. L., McCrary, B. S., Edmondson, S. P., and Shriver, J. W. (2000) The acid-induced folded state of Sac7d is the native state, Protein Sci. 9, 1878-1888.
-
(2000)
Protein Sci.
, vol.9
, pp. 1878-1888
-
-
Bedell, J.L.1
McCrary, B.S.2
Edmondson, S.P.3
Shriver, J.W.4
-
42
-
-
0027250665
-
Primary structure effects on peptide group hydrogen exchange
-
Bai, Y., Milne, J. S., Mayne, L., and Englander, S. W. (1993) Primary structure effects on peptide group hydrogen exchange, Proteins 17, 75-86.
-
(1993)
Proteins
, vol.17
, pp. 75-86
-
-
Bai, Y.1
Milne, J.S.2
Mayne, L.3
Englander, S.W.4
-
44
-
-
0028282555
-
15N NMR relaxation
-
15N NMR relaxation, Biochemistry 33, 5984-6003.
-
(1994)
Biochemistry
, vol.33
, pp. 5984-6003
-
-
Farrow, N.A.1
Muhandiram, R.2
Singer, A.U.3
Pascal, S.M.4
Kay, C.M.5
Gish, G.6
Shoelson, S.E.7
Pawson, T.8
Forman-Kay, J.D.9
Kay, L.E.10
-
45
-
-
0037063506
-
An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates
-
Korzhnev, D. M., Skrynnikov, N. R., Millet, O., Torchia, D. A., and Kay, L. E. (2002) An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates, J. Am. Chem. Soc. 124, 10743-10753.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 10743-10753
-
-
Korzhnev, D.M.1
Skrynnikov, N.R.2
Millet, O.3
Torchia, D.A.4
Kay, L.E.5
-
46
-
-
0028941877
-
Backbone dynamics of Escherichia coli ribonuclease HI: Correlations with structure and function in an active enzyme
-
Mandel, A. M., Akke, M., and Palmer, A. G., III (1995) Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme, J. Mol. Biol. 246, 144-163.
-
(1995)
J. Mol. Biol.
, vol.246
, pp. 144-163
-
-
Mandel, A.M.1
Akke, M.2
Palmer III, A.G.3
-
47
-
-
0024449503
-
15N inverse detected heteronuclear NMR spectroscopy: Application to staphylococcal nuclease
-
15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease, Biochemistry 28, 8972-8979.
-
(1989)
Biochemistry
, vol.28
, pp. 8972-8979
-
-
Kay, L.E.1
Torchia, D.A.2
Bax, A.3
-
49
-
-
0028541223
-
A test of the model-free formulas. Effects of anisotropic rotational diffusion and dimerization
-
Schurr, J. M., Babcock, H. P., and Fujimoto, B. S. (1994) A test of the model-free formulas. Effects of anisotropic rotational diffusion and dimerization, J. Magn. Reson., Ser. B 105, 211-224.
-
(1994)
J. Magn. Reson., Ser. B
, vol.105
, pp. 211-224
-
-
Schurr, J.M.1
Babcock, H.P.2
Fujimoto, B.S.3
-
50
-
-
33646719091
-
Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules
-
Lipari, G., and Szabo, A. (1982) Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules, J. Am. Chem. Soc. 104, 4546-4559.
-
(1982)
J. Am. Chem. Soc.
, vol.104
, pp. 4546-4559
-
-
Lipari, G.1
Szabo, A.2
-
51
-
-
0025046144
-
Deviations from the simple two-parameter model-free approach to the interpretation of nitrogen-15 nuclear magnetic relaxation in proteins
-
Clore, G. M., Driscoll, P. C., Wingfield, P. T., and Gronenborn, A. M. (1990) Deviations from the simple two-parameter model-free approach to the interpretation of nitrogen-15 nuclear magnetic relaxation in proteins, J. Am. Chem. Soc. 112, 4989-4991.
-
(1990)
J. Am. Chem. Soc.
, vol.112
, pp. 4989-4991
-
-
Clore, G.M.1
Driscoll, P.C.2
Wingfield, P.T.3
Gronenborn, A.M.4
-
52
-
-
0032438190
-
The stability of proteins in extreme environments
-
Jaenicke, R., and Böhm, G. (1998) The stability of proteins in extreme environments, Curr. Opin. Struct. Biol. 8, 738-748.
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 738-748
-
-
Jaenicke, R.1
Böhm, G.2
-
53
-
-
0034724271
-
Do ultrastable proteins from hyperthermophiles have high or low conformational rigidity?
-
Jaenicke, R. (2000) Do ultrastable proteins from hyperthermophiles have high or low conformational rigidity?, Proc. Natl. Acad. Sci. U.S.A. 97, 2962-2964.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 2962-2964
-
-
Jaenicke, R.1
-
54
-
-
0026347331
-
Determinants of protein hyperthermostability. 1. Purification, amino acid sequence, and secondary structure from NMR of the rubredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus
-
Blake, P., Park, J., Bryant, F., Aono, A., and Magnuson, J. K. (1991) Determinants of protein hyperthermostability. 1. Purification, amino acid sequence, and secondary structure from NMR of the rubredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus, Biochemistry 30, 10885-10895.
-
(1991)
Biochemistry
, vol.30
, pp. 10885-10895
-
-
Blake, P.1
Park, J.2
Bryant, F.3
Aono, A.4
Magnuson, J.K.5
-
55
-
-
0028994307
-
2.0 Å structure of indole-3-glycerol phosphate synthase from the hyperthermophile Sulfolobus solfataricus: Possible determinants of protein stability
-
Henning, M., Darimont, B., Sterner, R., Kirschner, K., and Jansonius, J. N. (1995) 2.0 Å structure of indole-3-glycerol phosphate synthase from the hyperthermophile Sulfolobus solfataricus: possible determinants of protein stability, Structure 3, 1295-1306.
-
(1995)
Structure
, vol.3
, pp. 1295-1306
-
-
Henning, M.1
Darimont, B.2
Sterner, R.3
Kirschner, K.4
Jansonius, J.N.5
-
56
-
-
0035980242
-
Thermodynamic basis for the increased thermostability of CheY from the hyperthermophile Thermotoga maritima
-
Deutschman, W. A., and Dahlquist, F. W. (2001) Thermodynamic basis for the increased thermostability of CheY from the hyperthermophile Thermotoga maritima, Biochemistry 40, 13107-13113.
-
(2001)
Biochemistry
, vol.40
, pp. 13107-13113
-
-
Deutschman, W.A.1
Dahlquist, F.W.2
-
57
-
-
0033551438
-
Stability and folding of dihydrofolate reductase from the hyperthermophilic bacterium Thermotoga maritima
-
Dams, T., and Jaenicke, R. (1999) Stability and folding of dihydrofolate reductase from the hyperthermophilic bacterium Thermotoga maritima, Biochemistry 38, 9169-9178.
-
(1999)
Biochemistry
, vol.38
, pp. 9169-9178
-
-
Dams, T.1
Jaenicke, R.2
-
58
-
-
2142764458
-
Thermodynamic analysis of the unfolding and stability of the dimeric DNA-binding protein HU from the hyperthermophilic eubacterium Thermotoga maritima and its E34D mutant
-
Ruiz-Sanz, J., Filimonov, V. V., Christodoulou, E., Vorgias, C. E., and Mateo, P. L. (2004) Thermodynamic analysis of the unfolding and stability of the dimeric DNA-binding protein HU from the hyperthermophilic eubacterium Thermotoga maritima and its E34D mutant, Eur. J. Biochem. 271, 1497-1507.
-
(2004)
Eur. J. Biochem.
, vol.271
, pp. 1497-1507
-
-
Ruiz-Sanz, J.1
Filimonov, V.V.2
Christodoulou, E.3
Vorgias, C.E.4
Mateo, P.L.5
-
59
-
-
0037207103
-
Structural and thermodynamic studies on a salt-bridge triad in the NADP-binding domain of glutamate dehydrogenase from Thermotoga maritima: Cooperativity and electrostatic contribution to stability
-
Lebbink, J. H., Consalvi, V., Chiaraluce, R., Berndt, K. D., and Ladenstein, R. (2002) Structural and thermodynamic studies on a salt-bridge triad in the NADP-binding domain of glutamate dehydrogenase from Thermotoga maritima: cooperativity and electrostatic contribution to stability, Biochemistry 41, 15524-15535.
-
(2002)
Biochemistry
, vol.41
, pp. 15524-15535
-
-
Lebbink, J.H.1
Consalvi, V.2
Chiaraluce, R.3
Berndt, K.D.4
Ladenstein, R.5
-
60
-
-
0033858185
-
Thermal unfolding and conformational stability of the recombinant domain II of glutamate dehydrogenase from the hyperthermophile Thermotoga maritima
-
Consalvi, V., Chiaraluce, R., Giangiacomo, L., Scandurra, R., Christova, P., Karshikoff, A., Knapp, S., and Ladenstein, R. (2000) Thermal unfolding and conformational stability of the recombinant domain II of glutamate dehydrogenase from the hyperthermophile Thermotoga maritima, Protein Eng. 13, 501-507.
-
(2000)
Protein Eng.
, vol.13
, pp. 501-507
-
-
Consalvi, V.1
Chiaraluce, R.2
Giangiacomo, L.3
Scandurra, R.4
Christova, P.5
Karshikoff, A.6
Knapp, S.7
Ladenstein, R.8
-
61
-
-
0033528713
-
Thermodynamic study of phosphoglycerate kinase from Thermotoga maritima and its isolated domains: Reversible thermal unfolding monitored by differential scanning calorimetry and circular dichroism spectros-copy
-
Zaiss, K., and Jaenicke, R. (1999) Thermodynamic study of phosphoglycerate kinase from Thermotoga maritima and its isolated domains: reversible thermal unfolding monitored by differential scanning calorimetry and circular dichroism spectros-copy, Biochemistry 38, 4633-4639.
-
(1999)
Biochemistry
, vol.38
, pp. 4633-4639
-
-
Zaiss, K.1
Jaenicke, R.2
-
62
-
-
0032575295
-
Thermodynamic stability of archaeal histones
-
Li, W.-T., Grayling, R., Sandman, K., Edmondson, S., Shriver, J. W., and Reeve, J. N. (1998) Thermodynamic stability of archaeal histones, Biochemistry 37, 10563-10572.
-
(1998)
Biochemistry
, vol.37
, pp. 10563-10572
-
-
Li, W.-T.1
Grayling, R.2
Sandman, K.3
Edmondson, S.4
Shriver, J.W.5
Reeve, J.N.6
-
63
-
-
0034724392
-
Millisecond time scale conformational flexibility in a hyperthermophile protein at ambient temperature
-
Hernandez, G., Jenney, F. E., Jr., Adams, M. W., and LeMaster, D. M. (2000) Millisecond time scale conformational flexibility in a hyperthermophile protein at ambient temperature, Proc. Natl. Acad. Sci. U.S.A. 97, 3166-3170.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 3166-3170
-
-
Hernandez, G.1
Jenney Jr., F.E.2
Adams, M.W.3
Lemaster, D.M.4
-
64
-
-
4444337188
-
Absence of kinetic thermal stabilization in a hyperthermophile rubredoxin indicated by 40 microsecond folding in the presence of irreversible denaturation
-
LeMaster, D. M., Tang, J., and Hernandez, G. (2004) Absence of kinetic thermal stabilization in a hyperthermophile rubredoxin indicated by 40 microsecond folding in the presence of irreversible denaturation, Proteins 57, 118-127.
-
(2004)
Proteins
, vol.57
, pp. 118-127
-
-
Lemaster, D.M.1
Tang, J.2
Hernandez, G.3
-
65
-
-
0033596902
-
A thermodynamic comparison of mesophilic and thermophilic ribonucleases H
-
Hollien, J., and Marqusee, S. (1999) A thermodynamic comparison of mesophilic and thermophilic ribonucleases H, Biochemistry 38, 3831-3836.
-
(1999)
Biochemistry
, vol.38
, pp. 3831-3836
-
-
Hollien, J.1
Marqusee, S.2
-
66
-
-
0033598719
-
Structural distribution of stability in a thermophilic enzyme
-
Hollien, J., and Marqusee, S. (1999) Structural distribution of stability in a thermophilic enzyme, Proc. Natl. Acad. Sci. U.S.A. 96, 13674-13678.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 13674-13678
-
-
Hollien, J.1
Marqusee, S.2
-
67
-
-
2542487312
-
Multiple time scale backbone dynamics of homologous thermophilic and mesophilic ribonuclease HI enzymes
-
Butterwick, J. A., Patrick Loria, J., Astrof, N. S., Kroenke, C. D., Cole, R., Rance, M., and Palmer, A. G., III (2004) Multiple time scale backbone dynamics of homologous thermophilic and mesophilic ribonuclease HI enzymes, J. Mol. Biol. 339, 855-871.
-
(2004)
J. Mol. Biol.
, vol.339
, pp. 855-871
-
-
Butterwick, J.A.1
Patrick Loria, J.2
Astrof, N.S.3
Kroenke, C.D.4
Cole, R.5
Rance, M.6
Palmer III, A.G.7
-
68
-
-
0032478131
-
Solution structure of the SH3 domain from Bruton's tyrosine kinase
-
Hansson, H., Mattsson, P. T., Allard, P., Haapaniemi, P., Vihinen, M., Smith, C. I., and Hard, T. (1998) Solution structure of the SH3 domain from Bruton's tyrosine kinase, Biochemistry 37, 2912-2924.
-
(1998)
Biochemistry
, vol.37
, pp. 2912-2924
-
-
Hansson, H.1
Mattsson, P.T.2
Allard, P.3
Haapaniemi, P.4
Vihinen, M.5
Smith, C.I.6
Hard, T.7
-
69
-
-
0013298211
-
Solution structure, dynamics, and thermodynamics of the native state ensemble of the Sem-5 C-terminal SH3 domain
-
Ferreon, J. C., Volk, D. E., Luxon, B. A., Gorenstein, D. G., and Hilser, V. J. (2003) Solution structure, dynamics, and thermodynamics of the native state ensemble of the Sem-5 C-terminal SH3 domain, Biochemistry 42, 5582-5591.
-
(2003)
Biochemistry
, vol.42
, pp. 5582-5591
-
-
Ferreon, J.C.1
Volk, D.E.2
Luxon, B.A.3
Gorenstein, D.G.4
Hilser, V.J.5
-
70
-
-
0035798419
-
The role of backbone motions in ligand binding to the c-Src SH3 domain
-
Wang, C., Pawley, N. H., and Nicholson, L. K. (2001) The role of backbone motions in ligand binding to the c-Src SH3 domain, J. Mol. Biol. 313, 873-887.
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 873-887
-
-
Wang, C.1
Pawley, N.H.2
Nicholson, L.K.3
-
71
-
-
0033979148
-
Dynamics of the Hck-SH3 domain: Comparison of experiment with multiple molecular dynamics simulations
-
Horita, D. A., Zhang, W., Smithgall, T. E., Gmeiner, W. H., and Byrd, R. A. (2000) Dynamics of the Hck-SH3 domain: comparison of experiment with multiple molecular dynamics simulations, Protein Sci. 9, 95-103.
-
(2000)
Protein Sci.
, vol.9
, pp. 95-103
-
-
Horita, D.A.1
Zhang, W.2
Smithgall, T.E.3
Gmeiner, W.H.4
Byrd, R.A.5
-
72
-
-
1842559316
-
The response of internal dynamics to hydrophobic core mutations in the SH3 domain from the Fyn tyrosine kinase
-
Mittermaier, A., and Kay, L. E. (2004) The response of internal dynamics to hydrophobic core mutations in the SH3 domain from the Fyn tyrosine kinase, Protein Sci. 13, 1088-1099.
-
(2004)
Protein Sci.
, vol.13
, pp. 1088-1099
-
-
Mittermaier, A.1
Kay, L.E.2
-
73
-
-
0026711032
-
Fast internal main-chain dynamics of human ubiquitin
-
Schneider, D., Dellwo, M., and Wand, A. J. (1992) Fast internal main-chain dynamics of human ubiquitin, Biochemistry 31, 3645-3652.
-
(1992)
Biochemistry
, vol.31
, pp. 3645-3652
-
-
Schneider, D.1
Dellwo, M.2
Wand, A.J.3
-
75
-
-
0000760810
-
Flexibility of an arginine side chain at a DNA-protein interface
-
Berglund, H., Baumann, H., Knapp, S., Ladenstein, R., and Hard, T. (1995) Flexibility of an arginine side chain at a DNA-protein interface, J. Am. Chem. Soc. 117, 12883-12884.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 12883-12884
-
-
Berglund, H.1
Baumann, H.2
Knapp, S.3
Ladenstein, R.4
Hard, T.5
-
76
-
-
0033607209
-
Relationship between the native-state hydrogen exchange and the folding pathways of barnase
-
Chu, R. A., Takei, J., Barchi, J. J., Jr., and Bai, Y. (1999) Relationship between the native-state hydrogen exchange and the folding pathways of barnase, Biochemistry 38, 14119-14124.
-
(1999)
Biochemistry
, vol.38
, pp. 14119-14124
-
-
Chu, R.A.1
Takei, J.2
Barchi Jr., J.J.3
Bai, Y.4
-
77
-
-
0017706821
-
Reversible thermal unfolding of thermostable phosphoglycerate kinase. Thermostability associated with mean zero enthalpy change
-
Nojima, H., Ikai, A., Oshima, T., and Noda, H. (1977) Reversible thermal unfolding of thermostable phosphoglycerate kinase. Thermostability associated with mean zero enthalpy change, J. Mol. Biol. 116, 429-442.
-
(1977)
J. Mol. Biol.
, vol.116
, pp. 429-442
-
-
Nojima, H.1
Ikai, A.2
Oshima, T.3
Noda, H.4
-
78
-
-
0035000257
-
Some thermodynamic implications for the thermostability of proteins
-
Rees, D. C., and Robertson, A. D. (2001) Some thermodynamic implications for the thermostability of proteins, Protein Sci. 10, 1187-1194.
-
(2001)
Protein Sci.
, vol.10
, pp. 1187-1194
-
-
Rees, D.C.1
Robertson, A.D.2
-
79
-
-
1042298814
-
Mechanism of thermostabilization in a designed cold shock protein with optimized surface electrostatic interactions
-
Makhatadze, G. I., Loladze, V. V., Gribenko, A. V., and Lopez, M. M. (2004) Mechanism of thermostabilization in a designed cold shock protein with optimized surface electrostatic interactions, J. Mol. Biol. 336, 929-942.
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 929-942
-
-
Makhatadze, G.I.1
Loladze, V.V.2
Gribenko, A.V.3
Lopez, M.M.4
-
80
-
-
0033612222
-
Thermodynamics of the unfolding of the cold-shock protein from Thermotoga maritima
-
Wassenberg, D., Welker, C., and Jaenicke, R. (1999) Thermodynamics of the unfolding of the cold-shock protein from Thermotoga maritima, J. Mol. Biol. 289, 187-193.
-
(1999)
J. Mol. Biol.
, vol.289
, pp. 187-193
-
-
Wassenberg, D.1
Welker, C.2
Jaenicke, R.3
-
81
-
-
0033596744
-
Comparing the thermodynamic stabilities of a related thermophilic and mesophilic enzyme
-
Beadle, B. M., Baase, W. A., Wilson, D. B., Gilkes, N. R., and Shoichet, B. K. (1999) Comparing the thermodynamic stabilities of a related thermophilic and mesophilic enzyme, Biochemistry 38, 2570-2576.
-
(1999)
Biochemistry
, vol.38
, pp. 2570-2576
-
-
Beadle, B.M.1
Baase, W.A.2
Wilson, D.B.3
Gilkes, N.R.4
Shoichet, B.K.5
-
82
-
-
0030822593
-
Stability and dynamics in a hyperthermophile protein with melting temperature close to 200 °C
-
Hiller, R., Zhou, Z., Adams, M. W. W., and Englander, S. W. (1997) Stability and dynamics in a hyperthermophile protein with melting temperature close to 200 °C, Proc. Natl. Acad. Sci. U.S.A. 94, 11329-11332.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 11329-11332
-
-
Hiller, R.1
Zhou, Z.2
Adams, M.W.W.3
Englander, S.W.4
|