Solution structure of the SH3 domain from Bruton's tyrosine kinase

Biochemistry

Volumn 37, Issue 9, 1998, Pages 2912-2924

  Hansson, Henrik ^a   Mattsson, Pekka T ^b,c,d   Allard, Peter ^a   Haapaniemi, Pekka ^b,c   Vihinen, Mauno ^e   Smith, C I Edvard ^c,d   Härd, Torleif ^a  

^a ROYAL INSTITUTE OF TECHNOLOGY   (Sweden)

^b UNIVERSITY OF TURKU   (Finland)

^c KAROLINSKA INSTITUTE   (Sweden)

^d KAROLINSKA UNIVERSITY HOSPITAL   (Sweden)

^e UNIVERSITY OF HELSINKI   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN TYROSINE KINASE;

AGAMMAGLOBULINEMIA; AMINO TERMINAL SEQUENCE; ARTICLE; AUTOPHOSPHORYLATION; BINDING SITE; CARBOXY TERMINAL SEQUENCE; ENZYME ANALYSIS; ENZYME CONFORMATION; ENZYME STRUCTURE; GENE MUTATION; IMMUNE DEFICIENCY; LIGAND BINDING; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN FOLDING; PROTON NUCLEAR MAGNETIC RESONANCE; X CHROMOSOME LINKAGE;

AGAMMAGLOBULINEMIA; AMINO ACID SEQUENCE; HUMANS; LINKAGE (GENETICS); MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; PROTEIN-TYROSINE KINASES; SEQUENCE ALIGNMENT; SOLUTIONS; SRC HOMOLOGY DOMAINS; STRUCTURE-ACTIVITY RELATIONSHIP; X CHROMOSOME;

EID: 0032478131     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi972409f     Document Type: Article

References (57)

1. Sideras, P., and Smith, C. I. E. (1995) Adv. Immunol. 59, 135-223.
2. Tsukada, S., Saffran, D. C., Rawlings, D. J., Parolini, O., Allen, R. C., Klisak, I., Sparkes, R. S., Kubagawa, H., Mohandas, T., Quan, S., Belmont, J. W., Cooper, M. D., Conley, M. E., and Witte, O. N. (1993) Cell 72, 279-290.
3. Vetrie, D., Vorechovsky, I., Sideras, P., Holland, J., Davies, A., Flinter, F., Hammarström, L., Kinnon, C., Levinsky, R., Bobrow, M., Smith, C. I. E., and Bentley, D. R. (1993) Nature 361, 226-233.
4. de Weers, M., Verschuren, M. C. M., Kraakman, M. E. M., Mensink, R. G. J., Schuurman, R. K. B., van Dongen, J. J. M., and Hendriks, R. W. (1993) Eur. J. Immunol. 23, 3109-3114.
5. Smith, C. I. E., Baskin, B., Humire-Greiff, P., Zhou, J.-N., Olsson, P. G., Maniar, H. S., Kjellén, P., Lambris, J. D., Christensson, B., Hammarström, L., Bentley, D., Vetrie, D., Islam, K. B., Vorechovsky, I., and Sideras, P. (1994) J. Immunol. 152, 557-565.
6. Smith, C. I. E., Islam, K. B., Vorechovsky, I., Olerup, O., Wallin, E., Rabbani, H., Baskin, B., and Hammarström, L. (1994) Immunol. Rev. 138, 159-183.
7. Shaw, G. (1993) Biochem. Biophys. Res. Commun. 195, 1145-1151.
8. Salim, K., Bottomley, M. J., Querfurth, E., Zvelebil, M. J., Gout, I., Scaife, R., Margolis, R. L., Gigg, R., Smith, C. I. E., Driscoll, P. C., Waterfield, M. D., and Panayotou, G. (1996) EMBO J. 15, 6241-6250.
9. Vihinen, M., Nilsson, L., and Smith, C. I. E. (1994) FEBS Lett. 350, 263-265.
10. Vihinen, M., Belohradsky, B. H., Haire, R. N., Holinski-Feder, E., Kwan, S.-P., Lappalainen, I., Lehväslaiho, H., Lester, T., Meindl, A., Ochs, H. D., Ollila, J., Vorechovsky, I., Weiss, M., and Smith, C. I. E. (1997) Nucleic Acids Res. 25, 166-171.
11. Zhu, Q., Zhang, M., Rawlings, D. J., Vihinen, M., Hagemann, T., Saffran, D. C., Kwan, S.-P., Nilsson, L., Smith, C. I. E., Witte, O. N., Chen, S.-H., and Ochs, H. D. (1994) J. Exp. Med. 180, 461-470.
12. Chen, Y.-J., Lin, S.-C., Tzeng, S.-R., Patel, H. V., Lyu, P.-C., and Cheng, J.-W. (1996) Proteins 26, 465-471.
13. Ren, R., Mayer, B. J., Cicchetti, P., and Baltimore, D. (1993) Science 259, 1157-1161.
14. Yu, H., Chen, J. K., Feng, S., Dalgarno, D. C., Brauer, A. W., and Schreiber, S. L. (1994) Cell 76, 933-945.
15. Cheng, G., Ye, Z.-S., and Baltimore, D. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 8152-8155.
16. Bunnell, S. C., Henry, P. A., Kolluri, R., Kirchhausen, T., Rickles, R. J., and Berg, L. J. (1996) J. Biol. Chem. 271, 25646-25656.
17. Andreotti, A. H., Bunnell, S. C., Feng, S., Berg, L. J., and Schreiber, S. L. (1997) Nature 385, 93-97.
18. Sicheri, F., Moarefi, I., and Kuriyan, J. (1997) Nature 385, 602-609.
19. Xu, W., Harrison, S. C., and Eck, M. J. (1997) Nature 385, 595-602.
20. Moarefi, I., LaFevre-Bernt, M., Sichert, F., Huse, M., Lee, C.-H., Kuriyan, J., and Miller, W. T. (1997) Nature 385, 650-653.
21. Rawlings, D. J., Scharenberg, A. M., Park, H., Wahl, M. I., Lin, S., Kato, R. M., Fluckiger, A.-C., Witte, O. N., and Kinet, J.-P. (1996) Science 271, 822-825.
22. Park, H., Wahl, M. I., Afar, D. E. H., Turck, C. W., Rawlings, D. J., Tam, C., Scharenberg, A. M., Kinet, J.-P., and Witte, O. N. (1996) Immunity 4, 515-525.
23. Bullock, W. O., Fernandez, J. M., and Short, J. M. (1987) BioTechniques 5, 376-378.
24. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254.
25. Levy, G. C., and Lichter, R. L. (1979) in Nitrogen-15 Nuclear Magnetic Resonance Spectroscopy (Levy, G. C., and Lichter, R. L., Ed.) pp 59, Wiley, New York.
26. Rance, M., Sørensen, O. W., Bodenhausen, G., Wagner, G., Ernst, R. R., and Wüthrich, K. (1983) Biochem. Biophys. Res. Commun. 117, 479-485.
27. Macura, S., and Ernst, R. R. (1980) Mol. Phys. 41, 95-117.
28. Griesinger, C., Otting, G., Wüthrich, K., and Ernst, R. R. (1988) J. Am. Chem. Soc. 110, 7870-7872.
29. Lippens, G., Dhalluin, C., and Wieruszeski, J.-M. (1995) J. Biomol. NMR 5, 327-331.
30. Marion, D., Ikura, M., Tschudin, R., and Bax, A. (1989) J. Magn. Reson. 85, 393-399.
31. Kay, L. E., Keifer, P., and Saarinen, T. (1992) J. Am. Chem. Soc. 114, 10663-10665.
32. Zhang, O., Kay, L. E., Olivier, J. P., and Forman-Kay, J. D. (1994) J. Biomol. NMR 4, 845-858.
33. Kuboniwa, H., Grzesiek, S., Delaglio, F., and Bax, A. (1994) J. Biomol. NMR 4, 871-878.
34. Archer, S. J., Ikura, M., Torchia, D. A., and Bax, A. (1991) J. Magn. Reson. 95, 636-641.
35. Farrow, N. A., Muhandiram, R., Singer, A. U., Pascal, S. M., Kay, C. M., Gish, G., Shoelson, S. E., Pawson, T., Forman-Kay, J. D., and Kay, L. E. (1994) Biochemistry 33, 5984-6003.
36. Kraulis, P. J. (1989) J. Magn. Reson. 84, 627-633.
37. Kraulis, P. J., Domaille, P. J., Campbell-Burke, S. L., van Aken, T., and Laue, E. D. (1994) Biochemistry 33, 3515-3531.
38. Palmer, A. G., III, Rance, M., and Wright, P. E. (1991) J. Am. Chem. Soc. 113, 4371-4380.
39. Peng, J. W., and Wagner, G. (1994) Methods Enzymol. 239, 563-596.
40. Lipari, G., and Szabo, A. (1982) J. Am. Chem. Soc. 104, 4546-4559.
41. Lipari, G., and Szabo, A. (1982) J. Am. Chem. Soc. 104, 4559-4570.
42. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids, John Wiley & Sons: New York.
43. Fletcher, C. M., Jones, D. N. M., Diamond, R., and Neuhaus, D. (1996) J. Biomol. NMR 8, 292-310.
44. Vuister, G. W., and Bax, A. (1993) J. Am. Chem. Soc. 115, 7772-7777.
45. Wagner, G., Hyberts, S. G., and Havel, T. F. (1992) Annu. Rev. Biophys. Biomol. Struct. 21, 167-198.
46. Brünger, A. T. (1992) X.-PLOR version 3.1. A System for X-ray Crystallography and NMR, 3.1 ed., Yale University Press: New Haven, CT.
47. Laskowski, R. A., Rullmann, J. A. C., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) J. Biomol. NMR 8, 477-486.
48. Hyberts, S. G., Goldberg, M. S., Havel, T. F., and Wagner, G. (1992) Protein Sci. 1, 736-751.
49. Yu, H., Rosen, M. K., Shin, T. B., Seidel-Dugan, C., Brugge, J. S., and Schreiber, S. L. (1992) Science 258, 1665-1668.
50. Morton, C. J., Pugh, D. J. R., Brown, E. L. J., Kahmann, J. D., Renzoni, D. A. C., and Campbell, I. D. (1996) Structure 4, 705-714.
51. Kohda, D., Terasawa, H., Ichikawa, S., Ogura, K., Hatanaka, H., Mandiyan, V., Ullrich, A., Schlessinger, J., and Inagaki, F. (1994) Structure 2, 1029-1040.
52. Flocco, M. M., and Mowbray, S. L. (1995) Protein Sci. 4, 2118-2122.
53. Marion, D., Driscoll, P. C., Kay, L. E., Wingfield, P. T., Bax, A., Gronenborn, A. M., and Clore, G. M. (1989) Biochemistry 28, 6150-6156.
54. Lim, W. A., Richards, F. M., and Fox, R. O. (1994) Nature 372, 375-379.
55. Chazin, W. J., Kördel, J., Drakenberg, T., Thulin, E., Brodin, P., and Grundström, T. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 2195-2198.
56. Dahl Sørensen, M., Kristensen, S. M., Bjørn, S., Norris, K., Olsen, O., and Led, J. J. (1996) J. Biomol. NMR 8, 391-403.
57. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.