Dissection of Arp2/3 complex actin nucleation mechanism and distinct roles for its nucleation-promoting factors in Saccharomyces cerevisiae

Genetics

Volumn 171, Issue 1, 2005, Pages 35-47

  D'Agostino, Jessica L ^a   Goode, Bruce L ^a  

^a BRANDEIS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; ACTIN RELATED PROTEIN 2; ACTIN RELATED PROTEIN 3;

ACTIN FILAMENT; ALLELE; ARTICLE; MUTANT; NONHUMAN; PLASMID; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN PURIFICATION; SACCHAROMYCES CEREVISIAE; STRAIN DIFFERENCE; YEAST;

ACTIN-RELATED PROTEIN 2; ACTIN-RELATED PROTEIN 2-3 COMPLEX; ACTINS; ALLELES; CYTOSKELETAL PROTEINS; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; GENOTYPE; MUTATION; MYOSIN HEAVY CHAINS; MYOSIN TYPE I; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; WISKOTT-ALDRICH SYNDROME PROTEIN;

SACCHAROMYCES CEREVISIAE;

EID: 26444593474     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.105.040634     Document Type: Article

References (46)

1. BELTZNER, C. C., and T. D. POLLARD, 2004 Identification of functionally important residues of Arp2/3 complex by analysis of homology models from diverse species. J. Mol. Biol. 336: 551-565.
2. DUNCAN, M. C., M. J. COPE, B. L. GOODE, B. WENDLAND and D. G. DRUBIN, 2001 Yeast Epsl5-like endocytic protein, Pan1p, activates the Arp2/3 complex. Nat. Cell Biol. 3: 687-690.
3. EVANGELISTA, M., B. M. KLEBL, A. H. TONG, B. A. WEBB, T. LEEUW et al., 2000 A role for myosin-1 in actin assembly through interactions with Vrp1p, Bee1p, and the Arp2/3 complex. J. Cell Biol. 148: 353-362.
4. GOLEY, E. D., S. E. RODENBUSCH, A. C. MARTIN and M. D. WELCH, 2004 Critical conformational changes in the Arp2/3 complex are induced by nucleotide and nucleation promoting factor. Mol. Cell 16: 269-279.
5. GOODE, B. L., 2002 Purification of yeast actin and actin-associated proteins. Methods Enzymol. 351: 433-441.
6. GOODE, B. L., and A. A. RODAL, 2001 Modular complexes that regulate actin assembly in budding yeast. Curr. Opin. Microbiol 4: 703-712.
7. GOODE, B. L., A. A. RODAL, G. BARNES and D. G. DRUBIN, 2001 Activation of the Arp2/3 complex by the actin filament binding protein Abplp. J. Cell Biol. 153: 627-634.
8. GOURLAY, C. W., H. DEWAR, D. T. WARREN, R. COSTA, N. SATISH et al., 2003 An interaction between Sla1p and Sla2p plays a role in regulating actin dynamics and endocytosis in budding yeast. J. Cell Sci. 116: 2551-2564.
9. GUTHRIE, C., and R. FINK, 1991 Guide to Yeast Genetics and Molecular Biology (Methods in Enzymology, Vol. 194). Academic Press, San Diego.
10. HIGGS, H. N., L. BLANCHOIN and T. D. POLLARDI 1999 Influence of the C terminus of Wiskott-Aldrich syndrome protein (WASp) and the Arp2/3 complex on actin polymerization. Biochemistry 38: 15212-15222.
11. HUANG, S., Y. Q. AN, J. M. MCDOWELL, E. C. MCKINNEY and R. B. MEAGHER, 1996 The Arabidopsis thaliana ACT4/ACT12 actin gene subclass is strongly expressed throughout pollen development. Plant J. 10: 189-202.
12. HUCKABA, T. M., A. C. GAY, L. F. PANTALENA, H. C. YANG and L. A. PON, 2004 Live cell imaging of the assembly, disassembly, and actin cable-dependent movement of endosomes and actin patches in the budding yeast, Saccharomyces cerevisiae. J. Cell Biol. 167: 519-530.
13. JONES, E. W., 2002 Vacuolar proteases and proteolytic artifacts in Saccharomyces cerevisiae. Methods Enzymol. 351: 127-150.
14. JONSDOTTIR, G. A., and R. LI, 2004 Dynamics of yeast Myosin I: evidence for a possible role in scission of endocytic vesicles. Curr. Biol. 14: 1604-1609.
15. KAKSONEN, M., Y. SUN and D. G. DRUBIN, 2003 A pathway for association of receptors, adaptors, and actin during endocytic internalization. Cell 115: 475-487.
16. KELLEHER, J. F., S. J. ATKINSON and T. D. POLLARD, 1995 Sequences, structural models, and cellular localization of the actin-related proteins Arp2 and Arp3 from Acanthamoeba. J. Cell Biol. 131: 385-397.
17. KOVAR, D. R., J. R. KUHN, A. L. TICHY and T. D. POLLARD, 2003 The fission yeast cytokinesis formin Cdc12p is a barbed end actin filament capping protein gated by profilin. J. Cell Biol. 161:875-887.
18. LECHLER, T., A. SHEVCHENKO and R. LI, 2000 Direct involvement of yeast type I myosins in Cdc42-dependent actin polymerization. J. Cell Biol. 148: 363-373.
19. LEES-MILLER, J. P., G. HENRY and D. M. HELFMAN, 1992 Identification of act2, an essential gene in the fission yeast Schizosaccharomyces pombe that encodes a protein related to actin. Proc. Natl. Acad. Sci. USA 89: 80-83.
20. Li, R., 1997 Bee1, a yeast protein with homology to Wiscott-Aldrich syndrome protein, is critical for the assembly of cortical actin cytoskeleton. J. Cell Biol. 136: 649-658.
21. LILA, T., and D. G. DRUBIN, 1997 Evidence for physical and functional interactions among two Saccharomyces cerevisiae SH3 domain proteins, an adenylyl cyclase-associated protein and the actin cytoskeleton. Mol. Biol. Cell 8: 367-385.
22. LONGTINE, M. S., A. MCKENZIE, III, D. J. DEMARINI, N. G. SHAH, A. WACH et al., 1998 Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14: 953-961.
23. MACHESKY, L. M., S. J. ATKINSON, C. AMPE, J. VANDEKERCKHOVE and T. D. POLLARD, 1994 Purification of a cortical complex containing two unconventional actins from Acanthamoeba by affinity chromatography on profilin-agarose. J. Cell Biol. 127: 107-115.
24. MADANIA, A., P. DUMOULIN, S. GRAVA, H. KITAMOTO, C. SCHARER-BRODBECK et al., 1999 The Saccharomyces cerevisiae homologue of human Wiskott-Aldrich syndrome protein Las17p interacts with the Arp2/3 complex. Mol. Biol. Cell 10: 3521-3538.
25. MOREAU, V., A. MADANIA, R. P. MARTIN and B. WINSOR, 1996 The Saccharomyces cerevisiae actin-related protein Arp2 is involved in the actin cytoskeleton. J. Cell Biol. 134: 117-132.
26. PAN, F., C. EGILE, T. LIPKIN and R. LI, 2004 ARPC1/Arc40 mediates the interaction of the actin-related protein 2 and 3 complex with Wiskott-Aldrich syndrome protein family activators. J. Biol. Chem. 279: 54629-54636.
27. POLLARD, T. D., 1984 Polymerization of ADP-actin. J. Cell Biol. 99: 769-777.
28. POLLARD, T. D., 1986 Rate constants for the reactions of ATP- and ADP-actin with the ends of actin filaments. J. Cell Biol. 103: 2747-2754.
29. QUINTERO-MONZON, O., A. A. RODAL, B. STROKOPYTOV, S. C. ALMO and B. L. GOODE, 2005 Structural and functional dissection of the Abp1 ADFH actin-binding domain reveals versatile in vivo adapter functions. Mol. Biol. Cell 16: 3128-3139.
30. ROBINSON, R. C., K. TURBEDSKY, D. A. KAISER, J. B. MARCHAND, H. N. HIGGS et al., 2001 Crystal structure of Arp2/3 complex. Science 294: 1679-1684.
31. RODAL, A. A., M. DUNCAN and D. DRUBIN, 2002 Purification of glutathione S-transferase fusion proteins from yeast. Methods Enzymol. 351: 168-172.
32. RODAL, A. A., A. L. MANNING, B. L. GOODE and D. G. DRUBIN, 2003 Negative regulation of yeast WASp by two SH3 domain-containing proteins. Curr. Biol. 13: 1000-1008.
33. RODAL, A. A., O. SOKOLOVA, D. B. ROBINS, K. M. DAUGHERTY, S. HIPPENMEYER et al., 2005a Conformational changes in the Arp2/3 complex leading to actin nucleation. Nat. Struct. Mol. Biol. 12: 26-31.
34. RODAL, A. A., L. KOZUBOWSKI, B. L. GOODE, D. G. DRUBIN and J. H. HARTWIG, 2005b Actin and septin ultrastructures at the budding yeast cell cortex. Mol. Biol. Cell 16: 372-384.
35. SCHWOB, E., and R. P. MARTIN, 1992 New yeast actin-like gene required late in the cell cycle. Nature 355: 179-182.
36. TANG, H. Y., J. Xu and M. CAI, 2000 Pan1p, End3p, and Sla1p, three yeast proteins required for normal cortical actin cytoskeleton organization, associate with each other and play essential roles in cell wall morphogenesis. Mol. Cell Biol. 20: 12-25.
37. TOSHIMA, J., J. Y. TOSHIMA, A. C. MARTIN and D. G. DRUBIN, 2005 Phosphoregulation of Arp2/3 dependent actin assembly during receptor-mediated endocytosis. Nat. Cell Biol. 7: 246-254.
38. URUNO, T., J. LIU, P. ZHANG, Y. FAN, C. EGILE et al., 2001 Activation of Arp2/3 complex-mediated actin polymerization by cortactin. Nat. Cell Biol. 3: 259-266.
39. URUNO, T., J. LIU, Y. LI, N. SMITH and X. ZHAN, 2003 Sequential interaction of actin-related proteins 2 and 3 (Arp2/3) complex with neural Wiscott-Aldrich syndrome protein (N-WASP) and cortactin during branched actin filament network formation. J. Biol. Chem. 278: 26086-26093.
40. WALLAR, B. J., and A. S. ALBERTS, 2003 The formins: active scaffolds that remodel the cytoskeleton. Trends Cell Biol. 13: 435-446.
41. WEAVER, A. M., A. V. KARGINOV, A. W. KINLEY, S. A. WEED, Y. LI et al., 2001 Cortactin promotes and stabilizes Arp2/3-induced actin filament network formation. Curr. Biol. 11: 370-374.
42. WEAVER, A. M., J. E. HEUSER, A. V. KARGINOV, W. L. LEE, J. T. PARSONS et al., 2002 Interaction of cortactin and N-WASp with Arp2/3 complex. Curr. Biol. 12: 1270-1278.
43. WELCH, M. D., and R. D. MULLINS, 2002 Cellular control of actin nucleation. Annu. Rev. Cell Dev. Biol. 18: 247-288.
44. WESP, A., L. HICKE, J. PALECEK, R. LOMBARDI, T. AUST et al., 1997 End4p/Sla2p interacts with actin-associated proteins for endocytosis in Saccharomyces cerevisiae. Mol. Biol. Cell 8: 2291-2306.
45. WINTER, D. C., E. Y. CHOE and R. LI, 1999 Genetic dissection of the budding yeast Arp2/3 complex: a comparison of the in vivo and structural roles of individual subunits. Proc. Natl. Acad. Sci. USA 96: 7288-7293.
46. XU, Y. J. B. MOSELEY, I. SAGOT, F. POY, D. PELLMAN et al., 2004 Crystal structures of a formin homology-2 domain reveal a tethered dimer architecture. Cell 116: 711-723.