AMP-forming acetyl-CoA synthetase from the extremely halophilic archaeon Haloarcula marismortui: Purification, identification and expression of the encoding gene, and phylogenetic affiliation

Extremophiles

Volumn 9, Issue 5, 2005, Pages 355-365

  Bräsen, Christopher ^a   Schönheit, Peter ^a  

^a UNIVERSITY OF KIEL   (Germany)

Author keywords

Acetate activation; ACS evolution; AMP forming acetyl CoA synthetase; Haloarcula marismortui; Halophilic archaea

Indexed keywords

ACETYL COENZYME A SYNTHETASE; ADENOSINE PHOSPHATE; POTASSIUM CHLORIDE; RECOMBINANT PROTEIN; SODIUM CHLORIDE;

AMINO ACID SEQUENCE; ARTICLE; CATALYSIS; CHEMISTRY; DRUG EFFECT; ENZYME SPECIFICITY; ENZYME STABILITY; ENZYMOLOGY; GENE EXPRESSION; GENETICS; HALOARCULA MARISMORTUI; HUMAN; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; MOLECULAR WEIGHT; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY;

ACETATE-COA LIGASE; ADENOSINE MONOPHOSPHATE; AMINO ACID SEQUENCE; CATALYSIS; ENZYME STABILITY; GENE EXPRESSION; HALOARCULA MARISMORTUI; HUMANS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PHYLOGENY; POTASSIUM CHLORIDE; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SODIUM CHLORIDE; SUBSTRATE SPECIFICITY;

ARCHAEA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA; HALOARCULA; HALOARCULA MARISMORTUI; METHANOSAETA;

EID: 26444522209     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-005-0449-0     Document Type: Article

References (45)

1. Aceti DJ, Ferry JG (1988) Purification and characterization of acetate kinase from acetate-grown Methanosarcina thermophila. Evidence for regulation of synthesis. J Biol Chem 263:15444-15448
2. Bonete MJ, Pire C, Llorca FI, Camacho ML (1996) Glucose dehydrogenase from the halophilic Archaeon Haloferax mediterranei: enzyme purification, characterisation and N-terminal sequence. FEBS Lett 383:227-229
3. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
4. Bräsen C, Schönheit P (2001) Mechanisms of acetate formation and acetate activation in halophilic archaea. Arch Microbiol 175:360-368 (Erratum, 180:504, 2003)
5. Bräsen C, Schönheit P (2004) Unusual ADP-forming acetyl-coenzyme A synthetases from the mesophilic halophilic euryarchaeon Haloarcula marismortui and from the hyperthermophilic crenarchaeon Pyrobaculum aerophilum. Arch Microbiol 182:277-287
6. Connaris H, Chaudhuri JB, Danson MJ, Hough DW (1999) Expression, reactivation, and purification of enzymes from Haloferax volcanii in Escherichia coli. Biotechnol Bioeng 64:38-45
7. Ferrer J, Perez-Pomares F, Bonete MJ (1996) NADP-glutamate dehydrogenase from the halophilic archaeon Haloferax mediterranei: enzyme purification, N-terminal sequence and stability. FEMS Microbiol Lett 141:59-63
8. Fujino T, Kondo J, Ishikawa M, Morikawa K, Yamamoto TT (2001) Acetyl-CoA synthetase 2, a mitochondrial matrix enzyme involved in the oxidation of acetate. J Biol Chem 276:11420-11426
9. Gerstmeir R, Wendisch VF, Schnicke S, Ruan H, Farwick M, Reinscheid D, Eikmanns BJ (2003) Acetate metabolism and its regulation in Corynebacterium glutamicum. J Biotechnol 104:99-122
10. Gulick AM, Starai VJ, Horswill AR, Homick KM, Escalante-Semerena JC (2003) The 1.75 Å crystal structure of acetyl-CoA synthetase bound to adenosine-5′-propylphosphate and coenzyme A. Biochemistry 42:2866-2873
11. Ikeda Y, Yamamoto J, Okamura M, Fujino T, Takahashi S, Takeuchi K, Osborne TF, Yamamoto TT, Ito S, Sakai J (2001) Transcriptional regulation of the murine acetyl-CoA synthetase 1 gene through multiple clustered binding sites for sterol regulatory element-binding proteins and a single neighboring site for Sp1. J Biol Chem 276:34259-34269
12. Ishikawa M, Fujino T, Sakashita H, Morikawa K, Yamamoto T (1995) Kinetic properties and structural characterization of highly purified acetyl-CoA synthetase from bovine heart and tissue distribution of the enzyme in rat tissues. Tohoku J Exp Med 175:55-67
13. Jetten MSM, Stams AJM, Zehnder AJB (1992) Methanogenesis from acetate: a comparasion in Methanothrix soehngenii and Methanosarcina spp. FEMS Microbiol Rev 88:181-198
14. Jogl G, Tong L (2004) Crystal structure of yeast acetyl-coenzyme A synthetase in complex with AMP. Biochemistry 43:1425-1431
15. Johnsen U, Schönheit P (2004) Novel xylose dehydrogenase in the halophilic archaeon Haloarcula marismortui. J Bacteriol 186:6198-6207
16. Karan D, David JR, Capy P (2001) Molecular evolution of the AMP-forming acetyl-CoA synthetase. Gene 265:95-101
17. Kumari S, Tishel R, Eisenbach M, Wolfe AJ (1995) Cloning, characterization, and functional expression of acs, the gene which encodes acetyl coenzyme A synthetase in Escherichia coli. J Bacteriol 177:2878-2886
18. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685
19. Luong A, Hannah VC, Brown MS, Goldstein JL (2000) Molecular characterization of human acetyl-CoA synthetase, an enzyme regulated by sterol regulatory element-binding proteins. J Biol Chem 275:26458-26466
20. Madern D, Ebel C, Zaccai G (2000) Halophilic adaptation of enzymes. Extremophiles 4:91-98
21. Martinez-Blanco H, Reglero A, Fernandez-Valverde M, Ferrero MA, Moreno MA, Penalva MA, Luengo JM (1992) Isolation and characterization of the acetyl-CoA synthetase from Penicillium chrysogenum. Involvement of this enzyme in the biosynthesis of penicillins. J Biol Chem 267:5474-5481
22. Meyer C, Schmid R, Scriba PC, Wehling M (1996) Purification and partial sequencing of high-affinity progesterone-binding site(s) from porcine liver membranes. Eur J Biochem 239:726-731
23. Oberlies G, Fuchs G, Thauer RK (1980) Acetate thiokinase and the assimilation of acetate in Methanobacterium thermoautotrophicum. Arch Microbiol 128:248-252
24. Oren A (1995) Uptake and turnover of acetate in hypersaline environments. FEMS Microbiol Ecol 18:75-85
25. Oren A, Ginzburg M, Ginzburg BZ, Hochstein LI, Volcani BE (1990) Haloarcula marismortui (Volcani) sp. nov., nom. rev., an extremely halophilic bacterium from the Dead Sea. Int J Syst Bacteriol 40:209-210
26. O'Sullivan J, Ettlinger L (1976) Characterization of the acetyl-CoA synthetase of Acetobacter aceti. Biochim Biophys Acta 450:410-417
27. Sanchez LB, Galperin MY, Müller M (2000) Acetyl-CoA synthetase from the amitochondriate eukaryote Giardia lamblia belongs to the newly recognized superfamily of acyl-CoA synthetases (nucleoside diphosphate-forming). J Biol Chem 275:5794-5803
28. Schaegger H, von Jagow G (1987) Tricine-sodium-dodecylsulfate- polyacrylamide gel electrophoresis for the separations of proteins in the range from 1-100 kDa. Anal Biochem 166:368-379
29. Schmidt HA, Strimmer K, Vingron M, von Haeseler A (2002) TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18:502-504
30. Serrano JA, Bonete MJ (2001) Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii. Biochim Biophys Acta 1520:154-162
31. Serrano JA, Camacho M, Bonete MJ (1998) Operation of glyoxylate cycle in halophilic archaea: presence of malate synthase and isocitrate lyase in Haloferax volcanii. FEBS Lett 434:13-16
32. +-dependent protein deacetylase activity in the Sir2 protein family. Proc Natl Acad Sci USA 97:6658-6663
33. Srere PA, Brazil H, Gonen L (1963) The citrate condensing enzyme of pigeon breast muscle and moth flight muscle. Acta Chem Scand 17:129-134
34. Starai VJ, Escalante-Semerena JC (2004a) Acetyl-coenzyme A synthetase (AMP forming). Cell Mol Life Sci 61:2020-2030
35. Starai VJ, Escalante-Semerena JC (2004b) Identification of the protein acetyltransferase (Pat) enzyme that acetylates acetyl-CoA synthetase in Salmonella enterica. J Mol Biol 340:1005-1012
36. Starai VJ, Celic I, Cole RN, Boeke JD, Escalante-Semerena JC (2002) Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active lysine. Science 298:2390-2392
37. Starai VJ, Takahashi H, Boeke JD, Escalante-Semerena JC (2003) Short-Chain fatty acid activation by acyl-coenzyme A synthetases requires SIR2 protein function in Salmonella enterica and Saccharomyces cerevisiae. Genetics 163:545-555
38. Sterner DE, Berger SL (2000) Acetylation of histones and transcription-related factors. Microbiol Mol Biol Rev 64:435-459
39. Thauer RK (1988) Citric-acid cycle, 50 years on. Modifications and an alternative pathway in anaerobic bacteria. Eur J Biochem 176:497-508
40. Thauer RK, Möller-Zinkhan D, Spormann AM (1989) Biochemistry of acetate catabolism in anaerobic chemotrophic bacteria. Annu Rev Microbiol 43:43-67
41. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
42. Uhrigshardt H, Walden M, John H, Petersen A, Anemüller S (2002) Evidence for an operative glyoxylate cycle in the thermoacidophilic crenarchaeon Sulfolobus acidocaldarius. FEBS Lett 513:223-229
43. Yamamoto J, Ikeda Y, Iguchi H, Fujino T, Tanaka T, Asaba H, Iwasaki S, Ioka RX, Kaneko IW, Magoori K, Takahashi S, Mori T, Sakaue H, Kodama T, Yanagisawa M, Yamamoto TT, Ito S, Sakai J (2004) A Krüppel-like factor KLF15 contributes fasting-induced transcriptional activation of mitochondrial acetyl-CoA synthetase gene AceCS2. J Biol Chem 279:16954-16962
44. Zeiher CA, Randall DD (1991) Spinach leaf acetyl-coenzyme A syntehtase: Purification and characterization. Plant Physiol 96:382-389
45. Zhang P, Ng WV, DasSarma S (2003) Personal communication. http://zdna2.umbi.umd.edu, NSF grant reference (MCB-0135595)