-
1
-
-
0022443291
-
Sequence similarities among the family of aminoacyl-tRNA synthetases
-
C. Hountondji, P. Dessen, and S. Blanquet Sequence similarities among the family of aminoacyl-tRNA synthetases Biochimie 68 1986 1071 1078
-
(1986)
Biochimie
, vol.68
, pp. 1071-1078
-
-
Hountondji, C.1
Dessen, P.2
Blanquet, S.3
-
2
-
-
0023061339
-
Aminoacyl-tRNA synthetases: General scheme of structure-function relationships in the polypeptides and recognition of transfer RNAs
-
P. Schimmel Aminoacyl-tRNA synthetases: general scheme of structure-function relationships in the polypeptides and recognition of transfer RNAs Annu. Rev. Biochem. 56 1987 125 158
-
(1987)
Annu. Rev. Biochem.
, vol.56
, pp. 125-158
-
-
Schimmel, P.1
-
3
-
-
0026591001
-
Structural and functional relationships between aminoacyl-tRNA synthetases
-
D. Moras Structural and functional relationships between aminoacyl-tRNA synthetases Trends Biochem. Sci. 17 1992 159 164
-
(1992)
Trends Biochem. Sci.
, vol.17
, pp. 159-164
-
-
Moras, D.1
-
4
-
-
0025043116
-
A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 Å
-
S. Cusack, C. Berthet-Colominas, M. Härtlein, N. Nassar, and R. Leberman A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 Å Nature 347 1990 249 255
-
(1990)
Nature
, vol.347
, pp. 249-255
-
-
Cusack, S.1
Berthet-Colominas, C.2
Härtlein, M.3
Nassar, N.4
Leberman, R.5
-
5
-
-
0025158208
-
Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs
-
G. Eriani, M. Delarue, O. Poch, J. Gangloff, and D. Moras Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs Nature 347 1990 203 206
-
(1990)
Nature
, vol.347
, pp. 203-206
-
-
Eriani, G.1
Delarue, M.2
Poch, O.3
Gangloff, J.4
Moras, D.5
-
6
-
-
0031456444
-
Aminoacyl-tRNA synthetases
-
S. Cusack Aminoacyl-tRNA synthetases Curr. Opin. Struct. Biol. 7 1997 881 889
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 881-889
-
-
Cusack, S.1
-
7
-
-
2342637052
-
Amino acid biogenesis, evolution of the genetic code and aminoacyl-tRNA synthetases
-
L. Klipcan, and M. Safro Amino acid biogenesis, evolution of the genetic code and aminoacyl-tRNA synthetases J. Theor. Biol. 228 2004 389 396
-
(2004)
J. Theor. Biol.
, vol.228
, pp. 389-396
-
-
Klipcan, L.1
Safro, M.2
-
8
-
-
0027436686
-
An operational RNA code for amino acids and possible relationship to genetic code
-
P. Schimmel, R. Gieǵ, D. Moras, and S. Yokoyama An operational RNA code for amino acids and possible relationship to genetic code Proc. Natl. Acad. Sci. USA 90 1993 8763 8768
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 8763-8768
-
-
Schimmel, P.1
Gieǵ, R.2
Moras, D.3
Yokoyama, S.4
-
9
-
-
3643114575
-
Universal rules and idiosyncratic features in tRNA identity
-
R. Gieǵ, M. Sissler, and C. Florentz Universal rules and idiosyncratic features in tRNA identity Nucleic Acids Res. 26 1998 5017 5035
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 5017-5035
-
-
Gieǵ, R.1
Sissler, M.2
Florentz, C.3
-
10
-
-
0003695480
-
Transfer RNA recognition by aminoacyl-tRNA synthetases
-
P.J. Beuning, and K. Musier-Forsyth Transfer RNA recognition by aminoacyl-tRNA synthetases Biopolymers 52 1999 1 28
-
(1999)
Biopolymers
, vol.52
, pp. 1-28
-
-
Beuning, P.J.1
Musier-Forsyth, K.2
-
11
-
-
15444373171
-
Tyrosyl-tRNA Synthetases
-
M. Ibba C. Francklyn S. Cusack Landes Biosciences Georgetown, TX
-
H. Bedouelle Tyrosyl-tRNA Synthetases M. Ibba C. Francklyn S. Cusack Aminoacyl-tRNA Synthetases 2004 Landes Biosciences Georgetown, TX 111 124 Chapter 12)
-
(2004)
Aminoacyl-tRNA Synthetases
, pp. 111-124
-
-
Bedouelle, H.1
-
12
-
-
13444288185
-
Compilation of tRNA sequences and sequences of tRNA genes
-
M. Sprinzl, and K.S. Vassilenko Compilation of tRNA sequences and sequences of tRNA genes Nucleic Acids Res. 33 2005 D139 D140
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Sprinzl, M.1
Vassilenko, K.S.2
-
13
-
-
0015866043
-
Mutant tyrosine transfer RNA that can be charged with glutamine
-
J.D. Smith, and J.E. Celis Mutant tyrosine transfer RNA that can be charged with glutamine Nat. New Biol. 243 1973 66 71
-
(1973)
Nat. New Biol.
, vol.243
, pp. 66-71
-
-
Smith, J.D.1
Celis, J.E.2
-
15
-
-
0024397265
-
Modeling with in vitro kinetic parameters for the elaboration of transfer RNA identity in vivo
-
Y.M. Hou, and P. Schimmel Modeling with in vitro kinetic parameters for the elaboration of transfer RNA identity in vivo Biochem. 28 1989 4942 4947
-
(1989)
Biochem.
, vol.28
, pp. 4942-4947
-
-
Hou, Y.M.1
Schimmel, P.2
-
16
-
-
0025052308
-
Tyr by tyrosyl-tRNA synthetase
-
Tyr by tyrosyl-tRNA synthetase Biochimie 72 1990 589 598
-
(1990)
Biochimie
, vol.72
, pp. 589-598
-
-
Bedouelle, H.1
-
17
-
-
0027074048
-
Synthetase competition and tRNA context determine the in vivo identity of tRNA discriminator mutants
-
J.M. Sherman, K. Rogers, M.J. Rogers, and D. Söll Synthetase competition and tRNA context determine the in vivo identity of tRNA discriminator mutants J. Mol. Biol. 228 1992 1055 1062
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 1055-1062
-
-
Sherman, J.M.1
Rogers, K.2
Rogers, M.J.3
Söll, D.4
-
19
-
-
0028785741
-
Species-specific microhelix aminoacylation by a eukaryotic pathogen tRNA synthetase dependent on a single base pair
-
C.L. Quinn, N. Tao, and P. Schimmel Species-specific microhelix aminoacylation by a eukaryotic pathogen tRNA synthetase dependent on a single base pair Biochem. 34 1995 12489 12495
-
(1995)
Biochem.
, vol.34
, pp. 12489-12495
-
-
Quinn, C.L.1
Tao, N.2
Schimmel, P.3
-
20
-
-
0021804220
-
Aminoacylation of anticodon loop substituted yeast tyrosine transfer RNA
-
L. Bare, and O.C. Uhlenbeck Aminoacylation of anticodon loop substituted yeast tyrosine transfer RNA Biochem. 24 1985 2354 2360
-
(1985)
Biochem.
, vol.24
, pp. 2354-2360
-
-
Bare, L.1
Uhlenbeck, O.C.2
-
21
-
-
0023055751
-
Specific substitution into the anticodon loop of yeast tyrosine transfer RNA
-
L.A. Bare, and O.C. Uhlenbeck Specific substitution into the anticodon loop of yeast tyrosine transfer RNA Biochem. 25 1986 5825 5830
-
(1986)
Biochem.
, vol.25
, pp. 5825-5830
-
-
Bare, L.A.1
Uhlenbeck, O.C.2
-
22
-
-
0000155236
-
Mutants of Escherichia coli initiator tRNA which suppress amber codons in Saccharomyces cerevisiae and are aminoacylated with tyrosine by yeast extracts
-
C.P. Lee, and U.L. RajBhandary Mutants of Escherichia coli initiator tRNA which suppress amber codons in Saccharomyces cerevisiae and are aminoacylated with tyrosine by yeast extracts Proc. Natl. Acad. Sci. USA 88 1991 11378 11382
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 11378-11382
-
-
Lee, C.P.1
Rajbhandary, U.L.2
-
23
-
-
0034701008
-
Identity of tRNA for yeast tyrosyl-tRNA synthetase: Tyrosylation is more sensitive to identity nucleotides than to structural features
-
P. Fechter, J. Rudinger-Thirion, A. Th́obald-Dietrich, and R. Gieǵ Identity of tRNA for yeast tyrosyl-tRNA synthetase: tyrosylation is more sensitive to identity nucleotides than to structural features Biochem. 39 2000 1725 1733
-
(2000)
Biochem.
, vol.39
, pp. 1725-1733
-
-
Fechter, P.1
Rudinger-Thirion, J.2
Th́obald-Dietrich, A.3
Gieǵ, R.4
-
25
-
-
0033544877
-
Major anticodon-binding region missing from an archaebacterial tRNA synthetase
-
B.A. Steer, and P. Schimmel Major anticodon-binding region missing from an archaebacterial tRNA synthetase J. Biol. Chem. 274 1999 35601 35606
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 35601-35606
-
-
Steer, B.A.1
Schimmel, P.2
-
26
-
-
0030945598
-
Human tyrosyl-tRNA synthetase shares amino acid sequence homology with a putative cytokine
-
T.A. Kleeman, D. Wei, K.L. Simpson, and E.A. First Human tyrosyl-tRNA synthetase shares amino acid sequence homology with a putative cytokine J. Biol. Chem. 272 1997 14420 14425
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 14420-14425
-
-
Kleeman, T.A.1
Wei, D.2
Simpson, K.L.3
First, E.A.4
-
27
-
-
0032472366
-
Genetic code in evolution: Switching species-specific aminoacylation with a peptide transplant
-
K. Wakasugi, C.L. Quinn, N. Tao, and P. Schimmel Genetic code in evolution: switching species-specific aminoacylation with a peptide transplant EMBO J. 17 1998 297 305
-
(1998)
EMBO J.
, vol.17
, pp. 297-305
-
-
Wakasugi, K.1
Quinn, C.L.2
Tao, N.3
Schimmel, P.4
-
28
-
-
0033735040
-
Search for characteristic structural features of mammalian mitochondrial tRNAs
-
M. Helm, H. Bruĺ, D. Friede, R. Gieǵ, J. Pütz, and C. Florentz Search for characteristic structural features of mammalian mitochondrial tRNAs RNA 6 2000 1356 1379
-
(2000)
RNA
, vol.6
, pp. 1356-1379
-
-
Helm, M.1
Bruĺ, H.2
Friede, D.3
Gieǵ, R.4
Pütz, J.5
Florentz, C.6
-
29
-
-
15444364536
-
Human mitochondrial TyrRS disobeys the tyrosine identity rules
-
L. Bonnefond, M. Frugier, R. Gieǵ, and J. Rudinger-Thirion Human mitochondrial TyrRS disobeys the tyrosine identity rules RNA 8 11 2005 (in press)
-
(2005)
RNA
, vol.8
, Issue.11
-
-
Bonnefond, L.1
Frugier, M.2
Gieǵ, R.3
Rudinger-Thirion, J.4
-
32
-
-
0015409667
-
Enzyme-mediated binding of tyrosine to brome-mosaic-virus ribonucleic acid
-
T.C. Hall, D.S. Shih, and P. Kaesberg Enzyme-mediated binding of tyrosine to brome-mosaic-virus ribonucleic acid Biochem. J. 129 1972 969 976
-
(1972)
Biochem. J.
, vol.129
, pp. 969-976
-
-
Hall, T.C.1
Shih, D.S.2
Kaesberg, P.3
-
33
-
-
0020655279
-
TRNA-like structures of plant viral RNAs: Conformational requirements for adenylation and aminoacylation
-
R.L. Joshi, S. Joshi, F. Chapeville, and A.L. Haenni tRNA-like structures of plant viral RNAs: conformational requirements for adenylation and aminoacylation EMBO J. 2 1983 1123 1127
-
(1983)
EMBO J.
, vol.2
, pp. 1123-1127
-
-
Joshi, R.L.1
Joshi, S.2
Chapeville, F.3
Haenni, A.L.4
-
35
-
-
0035366419
-
Specific tyrosylation of the bulky tRNA-like structure of Brome Mosaic Virus RNA relies solely on identity nucleotides present in its amino acid accepting domain
-
P. Fechter, R. Gieǵ, and J. Rudinger-Thirion Specific tyrosylation of the bulky tRNA-like structure of Brome Mosaic Virus RNA relies solely on identity nucleotides present in its amino acid accepting domain J. Mol. Biol. 309 2001 387 399
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 387-399
-
-
Fechter, P.1
Gieǵ, R.2
Rudinger-Thirion, J.3
-
36
-
-
0023669147
-
A protein required for splicing group I introns in Neurospora mitochondria is mitochondrial tyrosyl-tRNA synthetase or a derivative thereof
-
R.A. Akins, and A.M. Lambowitz A protein required for splicing group I introns in Neurospora mitochondria is mitochondrial tyrosyl-tRNA synthetase or a derivative thereof Cell 50 1987 331 345
-
(1987)
Cell
, vol.50
, pp. 331-345
-
-
Akins, R.A.1
Lambowitz, A.M.2
-
37
-
-
0029869019
-
A tyrosyl-tRNA synthetase protein induces tertiary folding of the group I intron catalytic core
-
M.G. Caprara, G. Mohr, and A.M. Lambowitz A tyrosyl-tRNA synthetase protein induces tertiary folding of the group I intron catalytic core J. Mol. Biol. 257 1996 512 531
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 512-531
-
-
Caprara, M.G.1
Mohr, G.2
Lambowitz, A.M.3
-
38
-
-
13244292332
-
A tyrosyl-tRNA synthetase adapted to function in group I intron splicing by acquiring a new RNA binding surface
-
P.J. Paukstelis, R. Coon, L. Madabusi, J. Nowakowski, A. Monzingo, J. Robertus, and A.M. Lambowitz A tyrosyl-tRNA synthetase adapted to function in group I intron splicing by acquiring a new RNA binding surface Mol. Cell 17 2005 417 428
-
(2005)
Mol. Cell
, vol.17
, pp. 417-428
-
-
Paukstelis, P.J.1
Coon, R.2
Madabusi, L.3
Nowakowski, J.4
Monzingo, A.5
Robertus, J.6
Lambowitz, A.M.7
-
39
-
-
0030582766
-
A tyrosyl-tRNA synthetase recognizes a conserved tRNA-like structural motif in the group I intron catalytic core
-
M.G. Caprara, V. Lehnert, A.M. Lambowitz, and E. Westhof A tyrosyl-tRNA synthetase recognizes a conserved tRNA-like structural motif in the group I intron catalytic core Cell 87 1996 1135 1145
-
(1996)
Cell
, vol.87
, pp. 1135-1145
-
-
Caprara, M.G.1
Lehnert, V.2
Lambowitz, A.M.3
Westhof, E.4
-
40
-
-
0036122414
-
Structure and dynamics of the anticodon arm binding domain of Bacillus stearothermophilus tyrosyl-tRNA synthetase
-
J.I. Guijarro, A. Pintar, A. Prochnicka-Chalufour, V. Guez, B. Gilquin, H. Bedouelle, and M. Delepierre Structure and dynamics of the anticodon arm binding domain of Bacillus stearothermophilus tyrosyl-tRNA synthetase Structure 10 2002 311 317
-
(2002)
Structure
, vol.10
, pp. 311-317
-
-
Guijarro, J.I.1
Pintar, A.2
Prochnicka-Chalufour, A.3
Guez, V.4
Gilquin, B.5
Bedouelle, H.6
Delepierre, M.7
-
41
-
-
0028341065
-
Thiobacillus ferrooxidans tyrosyl-tRNA synthetase functions in vivo in Escherichia coli
-
O. Salazar, B. Sagredo, E. Jedlicki, D. Söll, I. Weygand-Durasevic, and O. Orellana Thiobacillus ferrooxidans tyrosyl-tRNA synthetase functions in vivo in Escherichia coli J. Bacteriol. 176 1994 4409 4415
-
(1994)
J. Bacteriol.
, vol.176
, pp. 4409-4415
-
-
Salazar, O.1
Sagredo, B.2
Jedlicki, E.3
Söll, D.4
Weygand-Durasevic, I.5
Orellana, O.6
-
42
-
-
0032830481
-
Evolution of aminoacyl-tRNA synthetases-analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events
-
Y.I. Wolf, L. Aravind, N.V. Grishin, and E.V. Koonin Evolution of aminoacyl-tRNA synthetases-analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events Genome Res. 9 1999 689 710
-
(1999)
Genome Res.
, vol.9
, pp. 689-710
-
-
Wolf, Y.I.1
Aravind, L.2
Grishin, N.V.3
Koonin, E.V.4
-
43
-
-
0024428798
-
Origin and evolution of mitochondrial DNA
-
M.W. Gray Origin and evolution of mitochondrial DNA Annu. Rev. Cell Biol. 5 1989 25 50
-
(1989)
Annu. Rev. Cell Biol.
, vol.5
, pp. 25-50
-
-
Gray, M.W.1
-
44
-
-
15444367104
-
Toward the full set of human mitochondrial aminoacyl-tRNA synthetases: Characterization of AspRS and TyrRS
-
L. Bonnefond, A. Fender, J. Rudinger-Thirion, R. Gieǵ, C. Florentz, and M. Sissler Toward the full set of human mitochondrial aminoacyl-tRNA synthetases: characterization of AspRS and TyrRS Biochemistry 44 2005 4805 4816
-
(2005)
Biochemistry
, vol.44
, pp. 4805-4816
-
-
Bonnefond, L.1
Fender, A.2
Rudinger-Thirion, J.3
Gieǵ, R.4
Florentz, C.5
Sissler, M.6
-
45
-
-
0019953944
-
Tyrosyl-tRNA synthetase forms a mononucleotide-binding fold
-
T.N. Bhat, D.M. Blow, P. Brick, and J. Nyborg Tyrosyl-tRNA synthetase forms a mononucleotide-binding fold J. Mol. Biol. 158 1982 699 709
-
(1982)
J. Mol. Biol.
, vol.158
, pp. 699-709
-
-
Bhat, T.N.1
Blow, D.M.2
Brick, P.3
Nyborg, J.4
-
46
-
-
0023110653
-
Crystal structure of a deletion mutant of a tyrosyl-tRNA synthetase complexed with tyrosine
-
P. Brick, and D.M. Blow Crystal structure of a deletion mutant of a tyrosyl-tRNA synthetase complexed with tyrosine J. Mol. Biol. 194 1987 287 297
-
(1987)
J. Mol. Biol.
, vol.194
, pp. 287-297
-
-
Brick, P.1
Blow, D.M.2
-
47
-
-
0024406896
-
Structure of tyrosyl-tRNA synthetase refined at 2.3 Å Resolution. Interaction of the enzyme with tyrosyl adenylate intermediate
-
P. Brick, T.N. Bhat, and D.M. Blow Structure of tyrosyl-tRNA synthetase refined at 2.3 Å resolution. Interaction of the enzyme with tyrosyl adenylate intermediate J. Mol. Biol. 208 1989 83 98
-
(1989)
J. Mol. Biol.
, vol.208
, pp. 83-98
-
-
Brick, P.1
Bhat, T.N.2
Blow, D.M.3
-
48
-
-
0034815817
-
Crystal structure of Staphylococcus aureus tyrosyl-tRNA synthetase in complex with a class of potent and specific inhibitors
-
X. Qiu, C.A. Janson, W.W. Smith, S.M. Green, P. McDevitt, K. Johanson, P. Carter, M. Hibbs, C. Lewis, A. Chalker, A. Fosberry, J. Lalonde, J. Berge, P. Brown, C.S.V. Houge-Frydrych, and R.L. Jarvest Crystal structure of Staphylococcus aureus tyrosyl-tRNA synthetase in complex with a class of potent and specific inhibitors Protein Sci. 10 2001 2008 2016
-
(2001)
Protein Sci.
, vol.10
, pp. 2008-2016
-
-
Qiu, X.1
Janson, C.A.2
Smith, W.W.3
Green, S.M.4
McDevitt, P.5
Johanson, K.6
Carter, P.7
Hibbs, M.8
Lewis, C.9
Chalker, A.10
Fosberry, A.11
Lalonde, J.12
Berge, J.13
Brown, P.14
Houge-Frydrych, C.S.V.15
Jarvest, R.L.16
-
49
-
-
12344283963
-
Structural snapshots of the KMSKS loop rearrangement for amino acid activation by bacterial tyrosyl-tRNA synthetase
-
T. Kobayashi, T. Takimura, R. Sekine, K. Vincent, K. Kamata, K. Sakamoto, S. Nishimura, and S. Yokoyama Structural snapshots of the KMSKS loop rearrangement for amino acid activation by bacterial tyrosyl-tRNA synthetase J. Mol. Biol. 346 2005 105 117
-
(2005)
J. Mol. Biol.
, vol.346
, pp. 105-117
-
-
Kobayashi, T.1
Takimura, T.2
Sekine, R.3
Vincent, K.4
Kamata, K.5
Sakamoto, K.6
Nishimura, S.7
Yokoyama, S.8
-
50
-
-
0032541335
-
The solution structure of ribosomal protein S4 Δ41 reveals two subdomains and a positively charged surface that may interact with RNA
-
M.A. Markus, R.B. Gerstner, D.E. Draper, and D.A. Torchia The solution structure of ribosomal protein S4 Δ41 reveals two subdomains and a positively charged surface that may interact with RNA EMBO J. 17 1998 4559 4571
-
(1998)
EMBO J.
, vol.17
, pp. 4559-4571
-
-
Markus, M.A.1
Gerstner, R.B.2
Draper, D.E.3
Torchia, D.A.4
-
51
-
-
0029854940
-
Aminoacylation error correction
-
L. Lin, S.P. Hale, and P. Schimmel Aminoacylation error correction Nature 384 1996 33 34
-
(1996)
Nature
, vol.384
, pp. 33-34
-
-
Lin, L.1
Hale, S.P.2
Schimmel, P.3
-
52
-
-
0037099498
-
Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition
-
A. Yaremchuk, I. Kriklivyi, M. Tukalo, and S. Cusack Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition EMBO J. 21 2002 3829 3840
-
(2002)
EMBO J.
, vol.21
, pp. 3829-3840
-
-
Yaremchuk, A.1
Kriklivyi, I.2
Tukalo, M.3
Cusack, S.4
-
53
-
-
0020992450
-
Deletion mutagenesis using an 'M13 splint': The N-terminal structural domain of tyrosyl-tRNA synthetase (B. stearothermophilus) catalyses the formation of tyrosyl adenylate
-
M.M.Y. Waye, G. Winter, A.J. Wilkinson, and A.R. Fersht Deletion mutagenesis using an 'M13 splint': the N-terminal structural domain of tyrosyl-tRNA synthetase (B. stearothermophilus) catalyses the formation of tyrosyl adenylate EMBO J. 2 1983 1827 1829
-
(1983)
EMBO J.
, vol.2
, pp. 1827-1829
-
-
Waye, M.M.Y.1
Winter, G.2
Wilkinson, A.J.3
Fersht, A.R.4
-
55
-
-
0022447254
-
A model of synthetase/transfer RNA interaction as deduced by protein engineering
-
H. Bedouelle, and G. Winter A model of synthetase/transfer RNA interaction as deduced by protein engineering Nature 320 1986 371 373
-
(1986)
Nature
, vol.320
, pp. 371-373
-
-
Bedouelle, H.1
Winter, G.2
-
57
-
-
0034692907
-
Correlating amino acid conservation with function in tyrosyl-tRNA synthetase
-
Y. Xin, W. Li, D.S. Dwyer, and E.A. First Correlating amino acid conservation with function in tyrosyl-tRNA synthetase J. Mol. Biol. 303 2000 287 298
-
(2000)
J. Mol. Biol.
, vol.303
, pp. 287-298
-
-
Xin, Y.1
Li, W.2
Dwyer, D.S.3
First, E.A.4
-
59
-
-
0033622155
-
2.9 Å Crystal structure of ligand-free tryptophanyl-tRNA synthetase: Domain movements fragment the adenine nucleotide binding site
-
V.A. Ilyin, B. Temple, M. Hu, G. Li, Y. Yin, P. Vachette, and C.W. Carter Jr. 2.9 Å crystal structure of ligand-free tryptophanyl-tRNA synthetase: domain movements fragment the adenine nucleotide binding site Protein Sci. 9 2000 218 231
-
(2000)
Protein Sci.
, vol.9
, pp. 218-231
-
-
Ilyin, V.A.1
Temple, B.2
Hu, M.3
Li, G.4
Yin, Y.5
Vachette, P.6
Carter Jr., C.W.7
-
60
-
-
0037512360
-
Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion
-
T. Kobayashi, O. Nureki, R. Ishitani, A. Yaremchuk, M. Tukalo, S. Cusack, K. Sakamoto, and S. Yokoyama Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion Nat. Struct. Biol. 10 2003 425 432
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 425-432
-
-
Kobayashi, T.1
Nureki, O.2
Ishitani, R.3
Yaremchuk, A.4
Tukalo, M.5
Cusack, S.6
Sakamoto, K.7
Yokoyama, S.8
-
61
-
-
0031591387
-
Species-specific tRNA recognition in relation to tRNA synthetase contact residues
-
S. Nair, L. Ribas de Pouplana, F. Houman, A. Avruch, X. Shen, and P. Schimmel Species-specific tRNA recognition in relation to tRNA synthetase contact residues J. Mol. Biol. 269 1997 1 9
-
(1997)
J. Mol. Biol.
, vol.269
, pp. 1-9
-
-
Nair, S.1
Ribas De Pouplana, L.2
Houman, F.3
Avruch, A.4
Shen, X.5
Schimmel, P.6
-
62
-
-
0038780644
-
Genetic code expansion
-
R. Gieǵ Genetic code expansion Nat. Struct. Biol. 10 2003 414 416
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 414-416
-
-
Gieǵ, R.1
-
63
-
-
0023661276
-
An E. coli aminoacyl-tRNA synthetase can substitute for yeast mitochondrial enzyme function in vivo
-
H. Edwards, and P. Schimmel An E. coli aminoacyl-tRNA synthetase can substitute for yeast mitochondrial enzyme function in vivo Cell 51 1987 643 649
-
(1987)
Cell
, vol.51
, pp. 643-649
-
-
Edwards, H.1
Schimmel, P.2
-
64
-
-
0026586258
-
The mitochondrial tyrosyl-tRNA synthetase of Podospora anserina is a bifunctional enzyme active in protein synthesis and RNA splicing
-
U. Kamper, U. Kück, A.D. Cherniack, and A.M. Lambowitz The mitochondrial tyrosyl-tRNA synthetase of Podospora anserina is a bifunctional enzyme active in protein synthesis and RNA splicing Mol. Cell. Biol. 12 1992 499 511
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 499-511
-
-
Kamper, U.1
Kück, U.2
Cherniack, A.D.3
Lambowitz, A.M.4
-
65
-
-
0025874160
-
Sequence, structural and evolutionary relationships between class 2 aminoacyl-tRNA synthetases
-
S. Cusack, M. Härtlein, and R. Leberman Sequence, structural and evolutionary relationships between class 2 aminoacyl-tRNA synthetases Nucleic Acids Res. 19 1991 3489 3498
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 3489-3498
-
-
Cusack, S.1
Härtlein, M.2
Leberman, R.3
-
66
-
-
0029009371
-
RNA transfer, from minihelix to genetic code
-
P. Schimmel, and L. Ribas de Pouplana RNA transfer, from minihelix to genetic code Cell 81 1995 983 986
-
(1995)
Cell
, vol.81
, pp. 983-986
-
-
Schimmel, P.1
Ribas De Pouplana, L.2
-
67
-
-
0030053586
-
Evidence that two present-day components needed for the genetic code appeared after nucleated cells separated from eubacteria
-
L. Ribas de Pouplana, M. Frugier, C.L. Quinn, and P. Schimmel Evidence that two present-day components needed for the genetic code appeared after nucleated cells separated from eubacteria Proc. Natl. Acad. Sci. USA 93 1996 166 170
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 166-170
-
-
Ribas De Pouplana, L.1
Frugier, M.2
Quinn, C.L.3
Schimmel, P.4
-
68
-
-
0030788417
-
Evidence for the early divergence of tryptophanyl- and tyrosyl-tRNA synthetases
-
J.R. Brown, F.T. Robb, R. Weiss, and W.F. Doolittle Evidence for the early divergence of tryptophanyl- and tyrosyl-tRNA synthetases J. Mol. Evol. 45 1997 9 16
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 9-16
-
-
Brown, J.R.1
Robb, F.T.2
Weiss, R.3
Doolittle, W.F.4
-
69
-
-
0031789775
-
Evolution of genes, evolution of species: The case of aminoacyl-tRNA synthetases
-
Y. Diaz-Lazcoz, J.C. Aude, P. Nitschḱ, H. Chiapello, C. Land̀s-Devauchelle, and J.L. Risler Evolution of genes, evolution of species: the case of aminoacyl-tRNA synthetases Mol. Biol. Evol. 15 1998 1548 1561
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1548-1561
-
-
Diaz-Lazcoz, Y.1
Aude, J.C.2
Nitschḱ, P.3
Chiapello, H.4
Land̀s-Devauchelle, C.5
Risler, J.L.6
-
70
-
-
0033046425
-
Novel predicted RNA-binding domains associated with the translation machinery
-
L. Aravind, and E.V. Koonin Novel predicted RNA-binding domains associated with the translation machinery J. Mol. Evol. 48 1999 291 302
-
(1999)
J. Mol. Evol.
, vol.48
, pp. 291-302
-
-
Aravind, L.1
Koonin, E.V.2
-
71
-
-
0037016058
-
Mutational switching of a yeast tRNA synthetase into a mammalian-like synthetase cytokine
-
J. Liu, X.L. Yang, K.L. Ewalt, and P. Schimmel Mutational switching of a yeast tRNA synthetase into a mammalian-like synthetase cytokine Biochem. 41 2002 14232 14237
-
(2002)
Biochem.
, vol.41
, pp. 14232-14237
-
-
Liu, J.1
Yang, X.L.2
Ewalt, K.L.3
Schimmel, P.4
-
72
-
-
0026300096
-
A gene encoding a tyrosine tRNA synthetase is located near sacS in Bacillus subtilis
-
P. Glaser, F. Kunst, M. Debarbouille, A. Vertes, A. Danchin, and R. Dedonder A gene encoding a tyrosine tRNA synthetase is located near sacS in Bacillus subtilis DNA Seq. 1 1991 251 261
-
(1991)
DNA Seq.
, vol.1
, pp. 251-261
-
-
Glaser, P.1
Kunst, F.2
Debarbouille, M.3
Vertes, A.4
Danchin, A.5
Dedonder, R.6
-
73
-
-
0035793975
-
Conserved amino acids near the carboxy terminus of bacterial tyrosyl-tRNA synthetase are involved in tRNA and Tyr-AMP binding
-
J.C. Salazar, R. Zuniga, C. Lefimil, D. Söll, and O. Orellana Conserved amino acids near the carboxy terminus of bacterial tyrosyl-tRNA synthetase are involved in tRNA and Tyr-AMP binding FEBS Lett. 491 2001 257 260
-
(2001)
FEBS Lett.
, vol.491
, pp. 257-260
-
-
Salazar, J.C.1
Zuniga, R.2
Lefimil, C.3
Söll, D.4
Orellana, O.5
-
74
-
-
8844266097
-
The 1.2-mb genome sequence of Mimivirus
-
D. Raoult, S. Audic, C. Robert, C. Abergel, P. Renesto, H. Ogata, B. La Scola, M. Suzan, and J.M. Claverie The 1.2-mb genome sequence of Mimivirus Sci. 306 2004 1344 1350
-
(2004)
Sci.
, vol.306
, pp. 1344-1350
-
-
Raoult, D.1
Audic, S.2
Robert, C.3
Abergel, C.4
Renesto, P.5
Ogata, H.6
La Scola, B.7
Suzan, M.8
Claverie, J.M.9
-
75
-
-
0034671360
-
Macromolecular assemblage of aminoacyl-tRNA synthetases: Quantitative analysis of protein-protein interactions and mechanism of complex assembly
-
J.C. Robinson, P. Kerjean, and M. Mirande Macromolecular assemblage of aminoacyl-tRNA synthetases: quantitative analysis of protein-protein interactions and mechanism of complex assembly J. Mol. Biol. 304 2000 983 994
-
(2000)
J. Mol. Biol.
, vol.304
, pp. 983-994
-
-
Robinson, J.C.1
Kerjean, P.2
Mirande, M.3
-
76
-
-
0033515887
-
Two distinct cytokines released from a human aminoacyl-tRNA synthetase
-
K. Wakasugi, and P. Schimmel Two distinct cytokines released from a human aminoacyl-tRNA synthetase Sci. 284 1999 147 150
-
(1999)
Sci.
, vol.284
, pp. 147-150
-
-
Wakasugi, K.1
Schimmel, P.2
-
77
-
-
0024989581
-
Function of Neurospora mitochondrial tyrosyl-tRNA synthetase in RNA splicing requires an idiosyncratic domain not found in other synthetase
-
A.D. Cherniack, G. Garriga, J.D. Kittle Jr., R.A. Akins, and A.M. Lambowitz Function of Neurospora mitochondrial tyrosyl-tRNA synthetase in RNA splicing requires an idiosyncratic domain not found in other synthetase Cell 62 1990 745 755
-
(1990)
Cell
, vol.62
, pp. 745-755
-
-
Cherniack, A.D.1
Garriga, G.2
Kittle Jr., J.D.3
Akins, R.A.4
Lambowitz, A.M.5
-
78
-
-
0027315451
-
Purification of aminoacyl-tRNA synthetase kinase activities associated with threonyl- and tyrosyl-tRNA synthetases isolated from Bom:NMRI mouse liver
-
B.H. Berg Purification of aminoacyl-tRNA synthetase kinase activities associated with threonyl- and tyrosyl-tRNA synthetases isolated from Bom:NMRI mouse liver Biochem. Mol. Biol. Int. 29 1993 949 958
-
(1993)
Biochem. Mol. Biol. Int.
, vol.29
, pp. 949-958
-
-
Berg, B.H.1
-
79
-
-
0030748991
-
Cytoplasmic tyrosyl-tRNA synthetase rescues the defect in mitochondrial genome maintenance caused by the nuclear mutation mgm104-1 in the yeast Saccharomyces cerevisiae
-
M.X. Guan Cytoplasmic tyrosyl-tRNA synthetase rescues the defect in mitochondrial genome maintenance caused by the nuclear mutation mgm104-1 in the yeast Saccharomyces cerevisiae Mol. Gen. Genet. 255 1997 525 532
-
(1997)
Mol. Gen. Genet.
, vol.255
, pp. 525-532
-
-
Guan, M.X.1
-
82
-
-
0034696999
-
D-tyrosyl-tRNA(Tyr) metabolism in Saccharomyces cerevisiae
-
J. Soutourina, S. Blanquet, and P. Plateau D-tyrosyl-tRNA(Tyr) metabolism in Saccharomyces cerevisiae J. Biol. Chem. 275 2000 11626 11630
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 11626-11630
-
-
Soutourina, J.1
Blanquet, S.2
Plateau, P.3
-
83
-
-
0034833416
-
A general approach for the generation of orthogonal tRNAs
-
L. Wang, and P.G. Schultz A general approach for the generation of orthogonal tRNAs Chem. Biol. 8 2001 883 890
-
(2001)
Chem. Biol.
, vol.8
, pp. 883-890
-
-
Wang, L.1
Schultz, P.G.2
-
85
-
-
0035956903
-
Twenty-first aminoacyl-tRNA synthetase-suppressor tRNA pairs for possible use in site-specific incorporation of amino acid analogues into proteins in eukaryotes and in eubacteria
-
A.K. Kowal, C. Kohrer, and U.L. RajBhandary Twenty-first aminoacyl-tRNA synthetase-suppressor tRNA pairs for possible use in site-specific incorporation of amino acid analogues into proteins in eukaryotes and in eubacteria Proc. Natl. Acad. Sci. USA 98 2001 2268 2273
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 2268-2273
-
-
Kowal, A.K.1
Kohrer, C.2
Rajbhandary, U.L.3
-
86
-
-
0036168140
-
An unnatural base pair for incorporating amino acid analogs into proteins
-
I. Hirao, T. Ohtsuki, T. Fujiwara, T. Mitsui, T. Yokogawa, T. Okuni, H. Nakayama, K. Takio, T. Yabuki, T. Kigawa, K. Kodama, K. Nishikawa, and S. Yokoyama An unnatural base pair for incorporating amino acid analogs into proteins Nat. Biotechnol. 20 2002 177 182
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 177-182
-
-
Hirao, I.1
Ohtsuki, T.2
Fujiwara, T.3
Mitsui, T.4
Yokogawa, T.5
Okuni, T.6
Nakayama, H.7
Takio, K.8
Yabuki, T.9
Kigawa, T.10
Kodama, K.11
Nishikawa, K.12
Yokoyama, S.13
-
88
-
-
13444265892
-
Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion
-
T. Kobayashi, K. Sakamoto, T. Takimura, R. Sekine, K. Vincent, K. Kamata, S. Nishimura, and S. Yokoyama Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion Proc. Natl. Acad. Sci. USA 102 2005 1366 1371
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 1366-1371
-
-
Kobayashi, T.1
Sakamoto, K.2
Takimura, T.3
Sekine, R.4
Vincent, K.5
Kamata, K.6
Nishimura, S.7
Yokoyama, S.8
-
89
-
-
0036849244
-
Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells
-
K. Sakamoto, A. Hayashi, A. Sakamoto, D. Kiga, H. Nakayama, A. Soma, T. Kobayashi, M. Kitabatake, K. Takio, K. Saito, M. Shirouzu, I. Hirao, and S. Yokoyama Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells Nucleic Acids Res. 30 2002 4692 4699
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 4692-4699
-
-
Sakamoto, K.1
Hayashi, A.2
Sakamoto, A.3
Kiga, D.4
Nakayama, H.5
Soma, A.6
Kobayashi, T.7
Kitabatake, M.8
Takio, K.9
Saito, K.10
Shirouzu, M.11
Hirao, I.12
Yokoyama, S.13
-
90
-
-
0037162453
-
An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system
-
D. Kiga, K. Sakamoto, K. Kodama, T. Kigawa, T. Matsuda, T. Yabuki, M. Shirouzu, Y. Harada, H. Nakayama, K. Takio, Y. Hasegawa, Y. Endo, I. Hirao, and S. Yokoyama An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system Proc. Natl. Acad. Sci. USA 99 2002 9715 9720
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 9715-9720
-
-
Kiga, D.1
Sakamoto, K.2
Kodama, K.3
Kigawa, T.4
Matsuda, T.5
Yabuki, T.6
Shirouzu, M.7
Harada, Y.8
Nakayama, H.9
Takio, K.10
Hasegawa, Y.11
Endo, Y.12
Hirao, I.13
Yokoyama, S.14
-
92
-
-
3242878412
-
3DCoffee@igs: A web server for combining sequences and structures into multiple sequence alignment
-
O. Poirot, K. Suhre, C. Abergel, E. O'Toole, and C. Notredame 3DCoffee@igs: a web server for combining sequences and structures into multiple sequence alignment Nucleic Acids Res. 32 2004 W37 W40
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Poirot, O.1
Suhre, K.2
Abergel, C.3
O'Toole, E.4
Notredame, C.5
|