-
1
-
-
24644478868
-
-
Carbohydrate-Active Enzymes server
-
Coutinho PM, Henrissat B. Carbohydrate-Active Enzymes server; 1999. http://afmb.cnrs-mrs.fr/CAZY/.
-
(1999)
-
-
Coutinho, P.M.1
Henrissat, B.2
-
2
-
-
0027968302
-
The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei
-
Divne C, Ståhlberg J, Reinikainen T, Ruohonen L, Pettersson G, Knowles JK, Teeri TT, Jones TA. The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei. Science 1994;265:524-528.
-
(1994)
Science
, vol.265
, pp. 524-528
-
-
Divne, C.1
Ståhlberg, J.2
Reinikainen, T.3
Ruohonen, L.4
Pettersson, G.5
Knowles, J.K.6
Teeri, T.T.7
Jones, T.A.8
-
3
-
-
0345676498
-
High-resolution crystal structures reveal how a cellulose chain is bound in the 50 Å long tunnel of cellobiohydrolase I from Trichoderma reesei
-
Divne C, Ståhlberg J, Teeri TT, Jones TA. High-resolution crystal structures reveal how a cellulose chain is bound in the 50 Å long tunnel of cellobiohydrolase I from Trichoderma reesei. J Mol Biol 1998;275:309-325.
-
(1998)
J Mol Biol
, vol.275
, pp. 309-325
-
-
Divne, C.1
Ståhlberg, J.2
Teeri, T.T.3
Jones, T.A.4
-
4
-
-
0024962351
-
Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei: A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing
-
Kraulis J, Clore GM, Nilges M, Jones TA, Pettersson G, Knowles J, Gronenborn AM. Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei: a study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing. Biochemistry 1989;28:7241-7257.
-
(1989)
Biochemistry
, vol.28
, pp. 7241-7257
-
-
Kraulis, J.1
Clore, G.M.2
Nilges, M.3
Jones, T.A.4
Pettersson, G.5
Knowles, J.6
Gronenborn, A.M.7
-
5
-
-
0031059284
-
Three-dimensional structures of three engineered cellulose-binding domains of cellobiohydrolase I from Trichoderma reesei
-
Mattinen ML, Kontteli M, Kerovuo J, Linder M, Annila A, Lindeberg G, Reinikainen T, Drakenberg T. Three-dimensional structures of three engineered cellulose-binding domains of cellobiohydrolase I from Trichoderma reesei. Protein Sci 1997;6:294-303.
-
(1997)
Protein Sci
, vol.6
, pp. 294-303
-
-
Mattinen, M.L.1
Kontteli, M.2
Kerovuo, J.3
Linder, M.4
Annila, A.5
Lindeberg, G.6
Reinikainen, T.7
Drakenberg, T.8
-
6
-
-
0030606294
-
Activity studies and crystal structures of catalytically deficient mutants of cellobiohydrolase I from Trichoderma reesei
-
Ståhlberg J, Divne C, Koivula A, Piens K, Claeyssens M, Teeri TT, Jones TA. Activity studies and crystal structures of catalytically deficient mutants of cellobiohydrolase I from Trichoderma reesei. J Mol Biol 1996;264:337-349.
-
(1996)
J Mol Biol
, vol.264
, pp. 337-349
-
-
Ståhlberg, J.1
Divne, C.2
Koivula, A.3
Piens, K.4
Claeyssens, M.5
Teeri, T.T.6
Jones, T.A.7
-
7
-
-
0343247806
-
The roles and function of cellulose-binding domains
-
Linder M, Teeri TT. The roles and function of cellulose-binding domains. J Biotechnol 1997;57:15-28.
-
(1997)
J Biotechnol
, vol.57
, pp. 15-28
-
-
Linder, M.1
Teeri, T.T.2
-
8
-
-
0033563990
-
Widely different off rates of two closely related cellulose-binding domains from Trichoderma reesei
-
Carrard G, Linder M. Widely different off rates of two closely related cellulose-binding domains from Trichoderma reesei. Eur J Biochem 1999;262:637-643.
-
(1999)
Eur J Biochem
, vol.262
, pp. 637-643
-
-
Carrard, G.1
Linder, M.2
-
9
-
-
0034641715
-
Cellulose-binding domains promote hydrolysis of different sites on crystalline cellulose
-
Carrard G, Koivula A, Söderlund H, Béguin P. Cellulose-binding domains promote hydrolysis of different sites on crystalline cellulose. Proc Natl Acad Sci USA 2000;97:10342-10347.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 10342-10347
-
-
Carrard, G.1
Koivula, A.2
Söderlund, H.3
Béguin, P.4
-
10
-
-
14744278342
-
A new model for enzymatic hydrolysis of cellulose based on the two-domain structure of cellobiohydrolase I
-
Ståhlberg J, Johansson G, Pettersson G. A new model for enzymatic hydrolysis of cellulose based on the two-domain structure of cellobiohydrolase I. Bio/Technology 1991;9:286-290.
-
(1991)
Bio/Technology
, vol.9
, pp. 286-290
-
-
Ståhlberg, J.1
Johansson, G.2
Pettersson, G.3
-
11
-
-
0028172042
-
C1-Cx revisited: Intramolecular synergism in a cellulase
-
Din N, Damude HG, Gilkes NR, Miller RC, Warren RAJ, Kilburn DG. C1-Cx revisited: intramolecular synergism in a cellulase. Proc Natl Acad Sci USA 1994;91:11383-11387.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 11383-11387
-
-
Din, N.1
Damude, H.G.2
Gilkes, N.R.3
Miller, R.C.4
Warren, R.A.J.5
Kilburn, D.G.6
-
12
-
-
0032487130
-
Hydrolysis of microcrystalline cellulose by cellobiohydrolase I and endoglucanase II from Trichoderma reesei: Adsorption, sugar production pattern, and synergism of the enzymes
-
Medve J, Karlsson J, Lee D, Tjerneld F. Hydrolysis of microcrystalline cellulose by cellobiohydrolase I and endoglucanase II from Trichoderma reesei: adsorption, sugar production pattern, and synergism of the enzymes. Biotechnol Bioeng 1998;59:621-634.
-
(1998)
Biotechnol Bioeng
, vol.59
, pp. 621-634
-
-
Medve, J.1
Karlsson, J.2
Lee, D.3
Tjerneld, F.4
-
13
-
-
0031776810
-
The cellobiohydrolases of Trichoderma reesei: A review of indirect and direct evidence that their function is not just glycosidic bond hydrolysis
-
Sinnott ML. The cellobiohydrolases of Trichoderma reesei: a review of indirect and direct evidence that their function is not just glycosidic bond hydrolysis. Biochem Soc Trans 1998;26:160-164.
-
(1998)
Biochem Soc Trans
, vol.26
, pp. 160-164
-
-
Sinnott, M.L.1
-
14
-
-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE, Belew RK, Olson AJ. Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J Comput Chem 1998;19:1639-1662.
-
(1998)
J Comput Chem
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
-
15
-
-
0031058806
-
Automated docking of monosaccharide substrates and analogues and methyl α-acarviosinide in the glucoamylase active site
-
Coutinho PM, Dowd MK, Reilly PJ. Automated docking of monosaccharide substrates and analogues and methyl α-acarviosinide in the glucoamylase active site. Proteins 1997;27:235-248.
-
(1997)
Proteins
, vol.27
, pp. 235-248
-
-
Coutinho, P.M.1
Dowd, M.K.2
Reilly, P.J.3
-
16
-
-
0032716849
-
Automated docking of maltose, 2-deoxymaltose and maltotetraose into the soybean β-amylase active site
-
Laederach A, Dowd MK, Coutinho PM, Reilly PJ. Automated docking of maltose, 2-deoxymaltose and maltotetraose into the soybean β-amylase active site. Proteins 1999;37:166-175.
-
(1999)
Proteins
, vol.37
, pp. 166-175
-
-
Laederach, A.1
Dowd, M.K.2
Coutinho, P.M.3
Reilly, P.J.4
-
17
-
-
0036783337
-
Understanding protein structure-function relationships in Family 47 α-1,2-mannosidases through computational docking of ligands
-
Mulakala C, Reilly PJ. Understanding protein structure-function relationships in Family 47 α-1,2-mannosidases through computational docking of ligands. Proteins 2002;49:125-134.
-
(2002)
Proteins
, vol.49
, pp. 125-134
-
-
Mulakala, C.1
Reilly, P.J.2
-
18
-
-
4444357238
-
Arg343 in human surfactant protein D governs discrimination between glucose and N-acetylglucosamine ligands
-
Allen MJ, Laederach A, Reilly PJ, Mason RJ, Voelker DR. Arg343 in human surfactant protein D governs discrimination between glucose and N-acetylglucosamine ligands. Glycobiology 2004;14:693-700.
-
(2004)
Glycobiology
, vol.14
, pp. 693-700
-
-
Allen, M.J.1
Laederach, A.2
Reilly, P.J.3
Mason, R.J.4
Voelker, D.R.5
-
19
-
-
4444258637
-
Automated docking of phospholipids to the phospholipase D active site: Insight into the catalytic mechanism
-
Aikens CL, Laederach A, Reilly PJ. Automated docking of phospholipids to the phospholipase D active site: insight into the catalytic mechanism. Proteins 2004;57:27-35.
-
(2004)
Proteins
, vol.57
, pp. 27-35
-
-
Aikens, C.L.1
Laederach, A.2
Reilly, P.J.3
-
20
-
-
0031718310
-
Homology modeling, model and software evaluation: Three related resources
-
Rodriguez R, Chinea G, Lopez N, Pons T, Vriend G. Homology modeling, model and software evaluation: three related resources. Bioinformatics 1998;14:523-528.
-
(1998)
Bioinformatics
, vol.14
, pp. 523-528
-
-
Rodriguez, R.1
Chinea, G.2
Lopez, N.3
Pons, T.4
Vriend, G.5
-
21
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell WD, Cieplak P, Bayly CI, Gould IR, Merz KM Jr, Ferguson DM, Spellmeyer DC, Fox T, Caldwell JW, Kollman PA. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J Am Chem Soc 1995;117:5179-5197.
-
(1995)
J Am Chem Soc
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz Jr., K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
22
-
-
24644455754
-
-
Department of Chemistry, University of Arizona, Tucson, AZ
-
Walters P, Stahl M. Department of Chemistry, University of Arizona, Tucson, AZ. http://smog.com/chem/babel/; 1992-1996.
-
(1992)
-
-
Walters, P.1
Stahl, M.2
-
23
-
-
0025390935
-
MOPAC: A semiempirical molecular-orbital program
-
Available online
-
Stewart JJP. MOPAC: a semiempirical molecular-orbital program. J Comput-Aided Mol Des 1990;4:1-105. Available online at http://www.webmo.net/ support/linux_binaries.html.
-
(1990)
J Comput-Aided Mol des
, vol.4
, pp. 1-105
-
-
Stewart, J.J.P.1
-
24
-
-
36048972648
-
Native cellulose - A composite of two distinct crystalline forms
-
Atalla RH, Vanderhart DL. Native cellulose - a composite of two distinct crystalline forms. Science 1984;223:283-285.
-
(1984)
Science
, vol.223
, pp. 283-285
-
-
Atalla, R.H.1
Vanderhart, D.L.2
-
25
-
-
0036017874
-
Conformational features of crystal-surface cellulose from higher plants
-
Viëtor RJ, Newman RH, Ha MA, Apperley DC, Jarvis MC. Conformational features of crystal-surface cellulose from higher plants. Plant J 2002;30:721-731.
-
(2002)
Plant J
, vol.30
, pp. 721-731
-
-
Viëtor, R.J.1
Newman, R.H.2
Ha, M.A.3
Apperley, D.C.4
Jarvis, M.C.5
-
26
-
-
1642570259
-
Molecular conformations at the cellulose-water interface
-
Newman RH, Davidson TC. Molecular conformations at the cellulose-water interface. Cellulose 2004;11:23-32.
-
(2004)
Cellulose
, vol.11
, pp. 23-32
-
-
Newman, R.H.1
Davidson, T.C.2
-
27
-
-
0029856409
-
Structure of the Fusarium oxysporum endoglucanase I with a nonhydrolyzable substrate analogue: Substrate distortion gives rise to the preferred axial orientation for the leaving group
-
Sulzenbacher G, Driguez H, Henrissat B, Schülein M, Davies GJ. Structure of the Fusarium oxysporum endoglucanase I with a nonhydrolyzable substrate analogue: substrate distortion gives rise to the preferred axial orientation for the leaving group. Biochemistry 1996;35:15280-15287.
-
(1996)
Biochemistry
, vol.35
, pp. 15280-15287
-
-
Sulzenbacher, G.1
Driguez, H.2
Henrissat, B.3
Schülein, M.4
Davies, G.J.5
-
28
-
-
0028533340
-
Modeling of aldopyranosyl ring puckering with MM3(92)
-
Dowd MK, French AD, Reilly PJ. Modeling of aldopyranosyl ring puckering with MM3(92). Carbohyd Res 1994;264:1-19.
-
(1994)
Carbohyd Res
, vol.264
, pp. 1-19
-
-
Dowd, M.K.1
French, A.D.2
Reilly, P.J.3
-
29
-
-
0142106377
-
Engineering the exo-loop of Trichoderma reesei cellobiohydrolase, Cel7A: A comparison with Phanerochaete chrysosporium Cel7D
-
von Ossowski I, Ståhlberg J, Koivula A, Piens K, Becker D, Boer H, Harle R, Harris M, Divne C, Mahdi S, Zhao YX, Driguez H, Claeyssens M, Sinnott ML, Teeri TT. Engineering the exo-loop of Trichoderma reesei cellobiohydrolase, Cel7A: a comparison with Phanerochaete chrysosporium Cel7D. J Mol Biol 2003;333:817-829.
-
(2003)
J Mol Biol
, vol.333
, pp. 817-829
-
-
Von Ossowski, I.1
Ståhlberg, J.2
Koivula, A.3
Piens, K.4
Becker, D.5
Boer, H.6
Harle, R.7
Harris, M.8
Divne, C.9
Mahdi, S.10
Zhao, Y.X.11
Driguez, H.12
Claeyssens, M.13
Sinnott, M.L.14
Teeri, T.T.15
-
30
-
-
12944260514
-
Atomic features of protein-carbohydrate interactions
-
Vyas N. Atomic features of protein-carbohydrate interactions. Curr Opin Struct Biol 1991;1:732-740.
-
(1991)
Curr Opin Struct Biol
, vol.1
, pp. 732-740
-
-
Vyas, N.1
-
31
-
-
0026487856
-
Investigation of the function of mutated cellulose-binding domains of Trichoderma reesei cellobiohydrolase I
-
Reinikainen T, Ruohonen L, Nevanen T, Laaksonen L, Kraulis P, Jones TA, Knowles JK, Teeri TT. Investigation of the function of mutated cellulose-binding domains of Trichoderma reesei cellobiohydrolase I. Proteins 1992;14:475-482.
-
(1992)
Proteins
, vol.14
, pp. 475-482
-
-
Reinikainen, T.1
Ruohonen, L.2
Nevanen, T.3
Laaksonen, L.4
Kraulis, P.5
Jones, T.A.6
Knowles, J.K.7
Teeri, T.T.8
-
32
-
-
0029023464
-
Identification of functionally important amino acids in the cellulose-binding domain of Trichoderma reesei cellobiohydrolase I
-
Linder M, Mattinen ML, Kontteli M, Lindeberg G, Ståhlberg J, Drakenberg T, Reinikainen T, Pettersson G, Annila A. Identification of functionally important amino acids in the cellulose-binding domain of Trichoderma reesei cellobiohydrolase I. Protein Sci 1995;4:1056-1064.
-
(1995)
Protein Sci
, vol.4
, pp. 1056-1064
-
-
Linder, M.1
Mattinen, M.L.2
Kontteli, M.3
Lindeberg, G.4
Ståhlberg, J.5
Drakenberg, T.6
Reinikainen, T.7
Pettersson, G.8
Annila, A.9
-
33
-
-
0033979485
-
The mechanism of cellulase action on cotton fibers: Evidence from atomic force microscopy
-
Lee I, Evans BR, Woodward J. The mechanism of cellulase action on cotton fibers: evidence from atomic force microscopy. Ultramicroscopy 2000;82:213-221.
-
(2000)
Ultramicroscopy
, vol.82
, pp. 213-221
-
-
Lee, I.1
Evans, B.R.2
Woodward, J.3
-
34
-
-
0030825785
-
Surface diffusion of cellulases and their isolated binding domains on cellulose
-
Jervis EJ, Haynes CA, Kilburn DG. Surface diffusion of cellulases and their isolated binding domains on cellulose. J Biol Chem 1997;272:24016-24023.
-
(1997)
J Biol Chem
, vol.272
, pp. 24016-24023
-
-
Jervis, E.J.1
Haynes, C.A.2
Kilburn, D.G.3
-
35
-
-
0042099120
-
Non-hydrolytic disruption of crystalline structure of cellulose by cellulose binding domain and linker sequence of cellobiohydrolase I from Penicillium janthinellum
-
Gao PJ, Chen GJ, Wang TH, Zhang YS, Liu J. Non-hydrolytic disruption of crystalline structure of cellulose by cellulose binding domain and linker sequence of cellobiohydrolase I from Penicillium janthinellum. Acta Biochim Biophys Sinica 2001;33:13-18.
-
(2001)
Acta Biochim Biophys Sinica
, vol.33
, pp. 13-18
-
-
Gao, P.J.1
Chen, G.J.2
Wang, T.H.3
Zhang, Y.S.4
Liu, J.5
-
36
-
-
1442309235
-
Brownian motion, molecular motors and ratchets
-
Gabrys BJ, Pesz K, Bartkiewicz SJ. Brownian motion, molecular motors and ratchets. Physica A 2004;336:112-122.
-
(2004)
Physica A
, vol.336
, pp. 112-122
-
-
Gabrys, B.J.1
Pesz, K.2
Bartkiewicz, S.J.3
-
37
-
-
0027372765
-
Role of the interdomain linker peptide of Trichoderma reesei cellobiohydrolase I in its interaction with crystalline cellulose
-
Srisodsuk M, Reinikainen T, Penttila M, Teeri TT. Role of the interdomain linker peptide of Trichoderma reesei cellobiohydrolase I in its interaction with crystalline cellulose. J Biol Chem 1993;268:20756-20761.
-
(1993)
J Biol Chem
, vol.268
, pp. 20756-20761
-
-
Srisodsuk, M.1
Reinikainen, T.2
Penttila, M.3
Teeri, T.T.4
-
38
-
-
0001188346
-
Structural and functional domains of cellobiohydrolase I from Trichoderma reesei: A small-angle X-ray scattering study of the intact enzyme and its core
-
Abuja PM, Schmuck M, Pilz I, Tomme P, Claeyssens M, Esterbauer H. Structural and functional domains of cellobiohydrolase I from Trichoderma reesei: a small-angle X-ray scattering study of the intact enzyme and its core. Eur Biophys J Biophys Lett 1988;15:339-342.
-
(1988)
Eur Biophys J Biophys Lett
, vol.15
, pp. 339-342
-
-
Abuja, P.M.1
Schmuck, M.2
Pilz, I.3
Tomme, P.4
Claeyssens, M.5
Esterbauer, H.6
-
39
-
-
0025923034
-
Deletion of the linker connecting the catalytic and cellulose-binding domains of endoglucanase a (CenA) of Cellulomonas fimi alters its conformation and catalytic activity
-
Shen H, Schmuck M, Pilz I, Gilkes NR, Kilburn DG, Miller RC, Warren RAJ. Deletion of the linker connecting the catalytic and cellulose-binding domains of endoglucanase A (CenA) of Cellulomonas fimi alters its conformation and catalytic activity. J Biol Chem 1991;266:11335-11340.
-
(1991)
J Biol Chem
, vol.266
, pp. 11335-11340
-
-
Shen, H.1
Schmuck, M.2
Pilz, I.3
Gilkes, N.R.4
Kilburn, D.G.5
Miller, R.C.6
Raj, W.7
-
40
-
-
0024603248
-
Thermodynamics of hydrolysis of disaccharides-cellobiose, gentiobiose, isomaltose, and maltose
-
Tewari YB, Goldberg RN. Thermodynamics of hydrolysis of disaccharides-cellobiose, gentiobiose, isomaltose, and maltose. J Biol Chem 1989;264:3966-3971.
-
(1989)
J Biol Chem
, vol.264
, pp. 3966-3971
-
-
Tewari, Y.B.1
Goldberg, R.N.2
-
41
-
-
0027716645
-
Meaning of energetic parameters
-
Kammermeier H. Meaning of energetic parameters. Basic Res Cardiol 1993;88:380-384.
-
(1993)
Basic Res Cardiol
, vol.88
, pp. 380-384
-
-
Kammermeier, H.1
-
42
-
-
0028152402
-
Cellulose hydrolysis by the cellulases from Trichoderma reesei: Adsorptions of two cellobiohydrolases, two endocellulases and their core proteins on filter-paper and their relation to hydrolysis
-
Nidetzky B, Steiner W, Claeyssens M. Cellulose hydrolysis by the cellulases from Trichoderma reesei: adsorptions of two cellobiohydrolases, two endocellulases and their core proteins on filter-paper and their relation to hydrolysis. Biochem J 1994;303:817-823.
-
(1994)
Biochem J
, vol.303
, pp. 817-823
-
-
Nidetzky, B.1
Steiner, W.2
Claeyssens, M.3
-
43
-
-
0036880196
-
Helicase mechanisms and the coupling of helicases within macromolecular machines: Part I. Structures and properties of isolated helicases
-
Delagoutte E, von Hippel PH. Helicase mechanisms and the coupling of helicases within macromolecular machines: Part I. Structures and properties of isolated helicases. Quart Rev Biophys 2002;35:431-478.
-
(2002)
Quart Rev Biophys
, vol.35
, pp. 431-478
-
-
Delagoutte, E.1
Von Hippel, P.H.2
|