-
1
-
-
0031560777
-
Contact area difference (CAD): A robust measure to evaluate accuracy of protein models
-
Abagyan, R.A. and Totrov, M.M. (1997) Contact area difference (CAD): a robust measure to evaluate accuracy of protein models. J. Mol. Biol., 268, 678-685.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 678-685
-
-
Abagyan, R.A.1
Totrov, M.M.2
-
2
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein, F.C., Koetzle, T.F., Williams, G.J.B., Meyer, E.F., Jr, Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T. and Tasumi, M. (1977) The Protein Data Bank: a computer-based archival file for macromolecular structures. J. Mol Biol., 112, 535-542.
-
(1977)
J. Mol Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
Meyer Jr., E.F.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
3
-
-
0028863047
-
The use of position specific rotamers in model building by homology
-
Chinea, G., Padron, G., Hooft, R.W.W., Sander, C. and Vriend, G. (1995) The use of position specific rotamers in model building by homology. Proteins, 23, 415-421.
-
(1995)
Proteins
, vol.23
, pp. 415-421
-
-
Chinea, G.1
Padron, G.2
Hooft, R.W.W.3
Sander, C.4
Vriend, G.5
-
4
-
-
0028020684
-
Predicting local structural changes that result from point mutations
-
DeFilippis, V., Sander, C. and Vriend, G. (1994) Predicting local structural changes that result from point mutations. Protein Eng., 7, 1203-1208.
-
(1994)
Protein Eng.
, vol.7
, pp. 1203-1208
-
-
DeFilippis, V.1
Sander, C.2
Vriend, G.3
-
5
-
-
0030627637
-
The second meeting of the critical assessment of techniques for protein structure prediction (CASP2)
-
Dunbrack, R.L., Gerloff, D.L., Bower, M., Chen, X., Lichtarge, O. and Cohen, F.E. (1997) The second meeting of the critical assessment of techniques for protein structure prediction (CASP2). Fold. Des., 2, R27-R41.
-
(1997)
Fold. Des.
, vol.2
-
-
Dunbrack, R.L.1
Gerloff, D.L.2
Bower, M.3
Chen, X.4
Lichtarge, O.5
Cohen, F.E.6
-
6
-
-
0027092678
-
Selection of representative protein data sets
-
Hobohm, U., Scharf, M., Schneider, R. and Sander, C. (1992) Selection of representative protein data sets. Protein Sci., 1, 409-417.
-
(1992)
Protein Sci.
, vol.1
, pp. 409-417
-
-
Hobohm, U.1
Scharf, M.2
Schneider, R.3
Sander, C.4
-
7
-
-
0028746097
-
Reconstruction of symmetry-related molecules from protein data bank (PDB) files
-
Hooft, R.W.W., Sander, C. and Vriend, G. (1994) Reconstruction of symmetry-related molecules from protein data bank (PDB) files. J. Appl. Crystallogr., 27, 1006-1009.
-
(1994)
J. Appl. Crystallogr.
, vol.27
, pp. 1006-1009
-
-
Hooft, R.W.W.1
Sander, C.2
Vriend, G.3
-
8
-
-
0344186399
-
Errors in protein structures
-
Hooft, R.W.W., Sander, C., Vriend, G. and Abola, E. (1996a) Errors in protein structures. Nature, 381, 272.
-
(1996)
Nature
, vol.381
, pp. 272
-
-
Hooft, R.W.W.1
Sander, C.2
Vriend, G.3
Abola, E.4
-
9
-
-
2542554197
-
Verification of protein structures: Side-chain planarity
-
Hooft, R.W.W., Sander, C. and Vriend, G. (1996b) Verification of protein structures: Side-chain planarity. J. Appl. Crystallogr., 29, 714-716.
-
(1996)
J. Appl. Crystallogr.
, vol.29
, pp. 714-716
-
-
Hooft, R.W.W.1
Sander, C.2
Vriend, G.3
-
10
-
-
0030870075
-
Objectively judging the quality of a protein structure from a Ramachandran plot
-
Hooft, R.W.W., Sander, C. and Vriend, G. (1997) Objectively judging the quality of a protein structure from a Ramachandran plot. Comput. Applic. Biosci.
-
(1997)
Comput. Applic. Biosci.
-
-
Hooft, R.W.W.1
Sander, C.2
Vriend, G.3
-
11
-
-
0022701772
-
Using known substructures in protein model building and crystallography
-
Jones, T.A. and Thirup, S. (1986) Using known substructures in protein model building and crystallography. EMBO J., 5, 819-823.
-
(1986)
EMBO J.
, vol.5
, pp. 819-823
-
-
Jones, T.A.1
Thirup, S.2
-
12
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski, R.A., MasArthur, M.W., Moss, D.S. and Thornton, J.M. (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr., 26, 283-291.
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MasArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
13
-
-
0028864205
-
A critical assessment of comparative molecular modelling of tertiary structures of proteins
-
Mosimann, S., Meleshko, R. and James, M.N.G. (1995) A critical assessment of comparative molecular modelling of tertiary structures of proteins. Proteins, 23, 301-317.
-
(1995)
Proteins
, vol.23
, pp. 301-317
-
-
Mosimann, S.1
Meleshko, R.2
James, M.N.G.3
-
14
-
-
0030053370
-
ProMod and Swiss-Model: Internet based tools for automated comparative protein modelling
-
Peitsch, M.C. (1996) ProMod and Swiss-Model: Internet based tools for automated comparative protein modelling. Biochem. Soc. Trans., 24, 274-279.
-
(1996)
Biochem. Soc. Trans.
, vol.24
, pp. 274-279
-
-
Peitsch, M.C.1
-
15
-
-
0030598343
-
Deviations from standard atomic volumes as a quality measure for protein crystal structures
-
Pontius, J., Richelle, J. and Wodak, S. (1996) Deviations from standard atomic volumes as a quality measure for protein crystal structures. J. Mol. Biol., 264, 121-136.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 121-136
-
-
Pontius, J.1
Richelle, J.2
Wodak, S.3
-
16
-
-
7344224092
-
Professional gambling
-
Vergoten, G. and Theophanides, T. (eds), Kluwer Academic, Dordrecht
-
Rodriguez, R. and Vriend, G. (1997) Professional gambling. In Vergoten, G. and Theophanides, T. (eds), Biomolecular Structure and Dynamics. Kluwer Academic, Dordrecht.
-
(1997)
Biomolecular Structure and Dynamics
-
-
Rodriguez, R.1
Vriend, G.2
-
17
-
-
0030792657
-
The EMBL nucleotide sequence database
-
Stoesser, G., Sterk, P., Tuli, M.A., Stoehr, P.J. and Cameron, G.N. (1997) The EMBL nucleotide sequence database. Nucleic Acids Res., 25, 7-13.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 7-13
-
-
Stoesser, G.1
Sterk, P.2
Tuli, M.A.3
Stoehr, P.J.4
Cameron, G.N.5
-
18
-
-
0025398721
-
WHAT IF: A molecular modelling and drug design program
-
Vriend, G. (1990) WHAT IF: A molecular modelling and drug design program. J Mol. Graph., 8, 52-56.
-
(1990)
J Mol. Graph.
, vol.8
, pp. 52-56
-
-
Vriend, G.1
-
19
-
-
0027542118
-
Quality control of protein models: Directional atomic contact analysis
-
Vriend, G. and Sander, C. (1993) Quality control of protein models: Directional atomic contact analysis. J. Appl. Crystallogr., 26, 47-60.
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 47-60
-
-
Vriend, G.1
Sander, C.2
|