-
1
-
-
0030823001
-
Exceptional convergent evolution in a virus
-
Bull, J.J., Badgett, M.R., Wichman, H.A., Huelsenbeck, J.P., Hillis, D.M., Gulati, A., Ho, C., Molineux, I.J., 1997. Exceptional convergent evolution in a virus. Genetics 147, 1497-1507.
-
(1997)
Genetics
, vol.147
, pp. 1497-1507
-
-
Bull, J.J.1
Badgett, M.R.2
Wichman, H.A.3
Huelsenbeck, J.P.4
Hillis, D.M.5
Gulati, A.6
Ho, C.7
Molineux, I.J.8
-
2
-
-
2942571539
-
The comparative RNA web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
-
Cannone, J.J., Subramanian, S., Schnare, M.N., Collett, J.R., D'Souza, L.M., Du, Y., Feng, B., Lin, N., Madabusi, L.V., Muller, K.M., Pande, N., Shang, Z., Yu, N., Gutell, R.R., 2002. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BioMed. Central Bioinformat. 3, 2.
-
(2002)
BioMed. Central Bioinformat.
, vol.3
, pp. 2
-
-
Cannone, J.J.1
Subramanian, S.2
Schnare, M.N.3
Collett, J.R.4
D'Souza, L.M.5
Du, Y.6
Feng, B.7
Lin, N.8
Madabusi, L.V.9
Muller, K.M.10
Pande, N.11
Shang, Z.12
Yu, N.13
Gutell, R.R.14
-
3
-
-
0001026458
-
Descripción del primer bagre anoftalmo y depigmentado encontrado en aguas Mexicanas
-
México
-
Carranza, J., 1954. Descripción del primer bagre anoftalmo y depigmentado encontrado en aguas Mexicanas. Ciéncia, México 14, 129-136.
-
(1954)
Ciéncia
, vol.14
, pp. 129-136
-
-
Carranza, J.1
-
4
-
-
0001489328
-
Convergence and parallelism in cave entomobryinae
-
Christiansen, K., 1961. Convergence and parallelism in cave entomobryinae. Evolution 15 (3), 288-301.
-
(1961)
Evolution
, vol.15
, Issue.3
, pp. 288-301
-
-
Christiansen, K.1
-
5
-
-
85041154191
-
-
Harvard University Press, Cambridge, MA
-
Culver, D.C., Kane, T.C., Fong, D.W., 1995. Adaptation and Natural Selection in Caves - the Evolution of Gammarus Minimus. Harvard University Press, Cambridge, MA.
-
(1995)
Adaptation and Natural Selection in Caves - The Evolution of Gammarus Minimus
-
-
Culver, D.C.1
Kane, T.C.2
Fong, D.W.3
-
6
-
-
0027983037
-
Covergent evolution: The need to be explicit
-
Doolittle, R.F., 1994. Covergent evolution: the need to be explicit. Trends Biochem. Sci. 19, 15-18.
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 15-18
-
-
Doolittle, R.F.1
-
7
-
-
0036214944
-
Evidence for multiple genetic forms with similar eyeless phenotypes in the blind cavefish, Astyanax mexicanus
-
Dowling, T.E., Martasian, D.P., Jeffery, W.R., 2002. Evidence for multiple genetic forms with similar eyeless phenotypes in the blind cavefish, Astyanax mexicanus. Mol. Biol. Evol. 19, 446-455.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 446-455
-
-
Dowling, T.E.1
Martasian, D.P.2
Jeffery, W.R.3
-
8
-
-
0034754387
-
Origins and relationship of cave populations of the blind Mexican tetra, Astyanax fasciatus, in the Sierra de El Abra
-
Espinasa, L., Borowsky, R., 2001. Origins and relationship of cave populations of the blind Mexican tetra, Astyanax fasciatus, in the Sierra de El Abra. Environ. Biol. Fishes 62, 233-237.
-
(2001)
Environ. Biol. Fishes
, vol.62
, pp. 233-237
-
-
Espinasa, L.1
Borowsky, R.2
-
9
-
-
84959798530
-
Cases in which parsimony or compatibilty methods will be positively misleading
-
Felsenstein, J., 1978. Cases in which parsimony or compatibilty methods will be positively misleading. Syst. Zool. 27, 401-410.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
10
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J., 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
11
-
-
0038785934
-
Combined support for wholesale taxic atavism in gavialine crocodylians
-
Gatesy, J.G., Amato, M., Norell, R.D., Heyashi, C., 2003. Combined support for wholesale taxic atavism in gavialine crocodylians. Syst. Biol. 52, 403-422.
-
(2003)
Syst. Biol.
, vol.52
, pp. 403-422
-
-
Gatesy, J.G.1
Amato, M.2
Norell, R.D.3
Heyashi, C.4
-
12
-
-
0034351387
-
Likelihood-based tests of topologies in phylogenetics
-
Goldman, N., Anderson, J.P., Rodrigo, A.G., 2000. Likelihood-based tests of topologies in phylogenetics. Syst Biol. 49, 652-670.
-
(2000)
Syst. Biol.
, vol.49
, pp. 652-670
-
-
Goldman, N.1
Anderson, J.P.2
Rodrigo, A.G.3
-
14
-
-
0037467091
-
Phylogenetic relationships among bullhead catfishes of the genus Ameiurus (Siluriformes: Ictaluridae)
-
Hardman, M., Page, L.M., 2003. Phylogenetic relationships among bullhead catfishes of the genus Ameiurus (Siluriformes: Ictaluridae). Copeia 2003, 20-33.
-
(2003)
Copeia
, vol.2003
, pp. 20-33
-
-
Hardman, M.1
Page, L.M.2
-
15
-
-
0034752676
-
Mexican blindcats, genus Prietella (Ictaluridae): Review and status based on recent explorations
-
Hendrickson, D.A., Krejca, J.K., Rodriguez, J.M., 2001. Mexican blindcats, genus Prietella (Ictaluridae): review and status based on recent explorations. Environ. Biol. Fishes 62, 315-337.
-
(2001)
Environ. Biol. Fishes
, vol.62
, pp. 315-337
-
-
Hendrickson, D.A.1
Krejca, J.K.2
Rodriguez, J.M.3
-
16
-
-
0000704795
-
Applications of molecular systematics and the future of the field
-
Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Sinauer Associates, Sunderland, MA
-
Hillis, D.M., Mable, B.K., Moritz, C., 1996. Applications of molecular systematics and the future of the field. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics. Sinauer Associates, Sunderland, MA, pp. 515-543.
-
(1996)
Molecular Systematics
, pp. 515-543
-
-
Hillis, D.M.1
Mable, B.K.2
Moritz, C.3
-
17
-
-
0034847112
-
A new cave crayfish of the genus Orconectes, subgenus Orconectes, from southcentral Missouri, USA with a key to the stygobitic species of the genus (Decapoda, Cambaridae)
-
Hobbs III, H.H., 2001. A new cave crayfish of the genus Orconectes, subgenus Orconectes, from southcentral Missouri, USA with a key to the stygobitic species of the genus (Decapoda, Cambaridae). Crustaceana 74, 635-646.
-
(2001)
Crustaceana
, vol.74
, pp. 635-646
-
-
Hobbs III, H.H.1
-
18
-
-
0002476633
-
Systematics, speciation, and distribution of the subterranean amphipod genus Stygonectes (Gammaridae)
-
Holsinger, J.R., 1967. Systematics, speciation, and distribution of the subterranean amphipod genus Stygonectes (Gammaridae). US Nat. Mus. Bull. 259, 1-176.
-
(1967)
US Nat. Mus. Bull.
, vol.259
, pp. 1-176
-
-
Holsinger, J.R.1
-
19
-
-
0031084114
-
Is the Felsenstein zone a fly trap?
-
Huelsenbeck, J.P., 1997. Is the Felsenstein zone a fly trap? Syst. Biol. 46, 69-74.
-
(1997)
Syst. Biol.
, vol.46
, pp. 69-74
-
-
Huelsenbeck, J.P.1
-
20
-
-
12044255023
-
Success of phylogenetic methods in the four-taxon case
-
Huelsenbeck, J.P., Hillis, D.M., 1993. Success of phylogenetic methods in the four-taxon case. Syst. Biol. 42, 247-264.
-
(1993)
Syst. Biol.
, vol.42
, pp. 247-264
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
-
21
-
-
0002410257
-
Parametric bootstrapping in molecular phylogenetics: Application and performance
-
Ferraris, J.D., Palumbi, S.R. (Eds.), Wiley-Liss, New York
-
Huelsenbeck, J.P., Hillis, D.M., Jones, R., 1996a. Parametric bootstrapping in molecular phylogenetics: application and performance. In: Ferraris, J.D., Palumbi, S.R. (Eds.), Molecular Zoology: Strategies and Protocols. Wiley-Liss, New York, pp. 19-45.
-
(1996)
Molecular Zoology: Strategies and Protocols
, pp. 19-45
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
Jones, R.3
-
22
-
-
0030311344
-
A likelihood ratio test of monophyly
-
Huelsenbeck, J.P., Hillis, D.M., Nielsen, R., 1996b. A likelihood ratio test of monophyly. Syst. Biol. 45, 546-558.
-
(1996)
Syst. Biol.
, vol.45
, pp. 546-558
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
Nielsen, R.3
-
23
-
-
0034849408
-
MrBayes: Bayesian inference of phylogeny
-
Huelsenbeck, J.P., Ronquist, F., 2001. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17, 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
24
-
-
0040864209
-
-
Bureau of Economic Geology, University of Texas, Austin, Texas
-
Humphrey, W.E., Díaz, T., 2003. Jurassic and Lower Cretaceous Stratigraphy and Tectonics of Northeast Mexico. Bureau of Economic Geology, University of Texas, Austin, Texas.
-
(2003)
Jurassic and Lower Cretaceous Stratigraphy and Tectonics of Northeast Mexico
-
-
Humphrey, W.E.1
Díaz, T.2
-
25
-
-
0027139128
-
Morphological adaptations of the Texas blind catfishes Trogloglanis pattersoni and Satan eurystomus (Siluriformes: Ictaluridae) to their underground environment
-
Langecker, T.G., Longley, G., 1993. Morphological adaptations of the Texas blind catfishes Trogloglanis pattersoni and Satan eurystomus (Siluriformes: Ictaluridae) to their underground environment. Copeia 1993, 976-986.
-
(1993)
Copeia
, vol.1993
, pp. 976-986
-
-
Langecker, T.G.1
Longley, G.2
-
26
-
-
0032976397
-
Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees
-
Larget, B., Simon, D., 1999. Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Mol. Biol. Evol. 16, 750-759.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 750-759
-
-
Larget, B.1
Simon, D.2
-
27
-
-
2442493278
-
Status of Satan eurystomus Hubbs and Bailey, the widemouth blindcat
-
Longley, G., Karnei Jr., H.S., 1979a. Status of Satan eurystomus Hubbs and Bailey, the widemouth blindcat. U.S. Fish Wildl. Serv. Endang. Sp. Rept. 5 (1), 1-48.
-
(1979)
U.S. Fish Wildl. Serv. Endang. Sp. Rept.
, vol.5
, Issue.1
, pp. 1-48
-
-
Longley, G.1
Karnei Jr., H.S.2
-
28
-
-
2442455845
-
Status of Trogloglanis pattersoni Eigenmann, the toothless blindcat
-
Longley, G., Karnei Jr., H.S., 1979b. Status of Trogloglanis pattersoni Eigenmann, the toothless blindcat. U.S. Fish Wildl. Serv. Endang. Sp. Rept. 5 (2), 1-54.
-
(1979)
U.S. Fish Wildl. Serv. Endang. Sp. Rept.
, vol.5
, Issue.2
, pp. 1-54
-
-
Longley, G.1
Karnei Jr., H.S.2
-
29
-
-
0002400778
-
The comparative anatomy of the toothless blindcat, Trogloglanis pattersoni Eigenmann, with a phylogenetic analysis of the ictalurid catfishes
-
Lundberg, J.G., 1982. The comparative anatomy of the toothless blindcat, Trogloglanis pattersoni Eigenmann, with a phylogenetic analysis of the ictalurid catfishes. Misc. Publ. Mus. Zool. Univ. Mich. 163, 1-85.
-
(1982)
Misc. Publ. Mus. Zool. Univ. Mich.
, vol.163
, pp. 1-85
-
-
Lundberg, J.G.1
-
30
-
-
0001892397
-
The phylogeny of ictalurid catfishes: A synthesis of recent work
-
Mayden, R.L. (Ed.), Stanford University Press, Stanford, California
-
Lundberg, J.G., 1992. The phylogeny of ictalurid catfishes: A synthesis of recent work. In: Mayden, R.L. (Ed.), Systematics, Historical Ecology, and North American Freshwater Fishes. Stanford University Press, Stanford, California, pp. 392-420.
-
(1992)
Systematics, Historical Ecology, and North American Freshwater Fishes
, pp. 392-420
-
-
Lundberg, J.G.1
-
31
-
-
0002006063
-
Bathycetopsis oliveirai, gen. et sp. nov., a blind and depigmented catfish (Siluriformes: Cetopsidae) from the Brazilian Amazon
-
Lundberg, J.G., PyDaniel, L.R., 1994. Bathycetopsis oliveirai, gen. et sp. nov., a blind and depigmented catfish (Siluriformes: Cetopsidae) from the Brazilian Amazon. Copeia 1994, 381-389.
-
(1994)
Copeia
, vol.1994
, pp. 381-389
-
-
Lundberg, J.G.1
PyDaniel, L.R.2
-
32
-
-
0002683706
-
The native freshwater fishes of North America
-
Mayden, R.L. (Ed.), Stanford University Press, Stanford, California
-
Mayden, R.L., Burr, B.M., Page, L.M., Miller, R.R., 1992. The native freshwater fishes of North America. In: Mayden, R.L. (Ed.), Systematics, Historical Ecology, and North American Freshwater Fishes. Stanford University Press, Stanford, California, pp. 827-863.
-
(1992)
Systematics, Historical Ecology, and North American Freshwater Fishes
, pp. 827-863
-
-
Mayden, R.L.1
Burr, B.M.2
Page, L.M.3
Miller, R.R.4
-
33
-
-
0000786945
-
Origin and geography of the fishes of central Mexico
-
Hocutt, C.H., Wiley, E.O. (Eds.), Wiley, New York
-
Miller, R.R., Smith, M.L., 1986. Origin and geography of the fishes of central Mexico. In: Hocutt, C.H., Wiley, E.O. (Eds.), The Zoogeography of North American Freshwater Fishes. Wiley, New York, pp. 487-517.
-
(1986)
The Zoogeography of North American Freshwater Fishes
, pp. 487-517
-
-
Miller, R.R.1
Smith, M.L.2
-
34
-
-
0004052645
-
-
Texas Tech University, Lubbock
-
Mitchell, R.W., Russell, W.H., Elliott, W.R., 1977. Mexican eyeless characin fishes of the genus Astyanax: environment, distribution and evolution. Texas Tech University, Lubbock.
-
(1977)
Mexican Eyeless Characin Fishes of the Genus Astyanax: Environment, Distribution and Evolution
-
-
Mitchell, R.W.1
Russell, W.H.2
Elliott, W.R.3
-
35
-
-
85041146049
-
-
American Association of Petroleum Geologists, Tulsa, Oklahoma
-
Morán-Zenteno, D., 1994. Geology of the Mexican Republic. American Association of Petroleum Geologists, Tulsa, Oklahoma.
-
(1994)
Geology of the Mexican Republic
-
-
Morán-Zenteno, D.1
-
36
-
-
0001829453
-
Nucleic acids II: The polymerase chain reaction
-
Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Sinauer, Sunderland, MA
-
Palumbi, S.R., 1996. Nucleic acids II: the polymerase chain reaction. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics. Sinauer, Sunderland, MA, pp. 205-248.
-
(1996)
Molecular Systematics
, pp. 205-248
-
-
Palumbi, S.R.1
-
37
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada, D., Crandall, K.A., 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14, 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
38
-
-
0034761938
-
Adaptations of cave fishes with some comparisons to deep-sea fishes
-
Poulson, T.L., 2001. Adaptations of cave fishes with some comparisons to deep-sea fishes. Environ. Biol. Fishes 62, 345-364.
-
(2001)
Environ. Biol. Fishes
, vol.62
, pp. 345-364
-
-
Poulson, T.L.1
-
39
-
-
0008927515
-
The evolution of the Rio Grande basin as inferred from its fish fauna
-
Hocutt, C.H., Wiley, E.O. (Eds.), Wiley, New York
-
Smith, M.L., Miller, R.R., 1986. The evolution of the Rio Grande basin as inferred from its fish fauna. In: Hocutt, C.H., Wiley, E.O. (Eds.), The Zoogeography of North American Freshwater Fishes. Wiley, New York, pp. 457-485.
-
(1986)
The Zoogeography of North American Freshwater Fishes
, pp. 457-485
-
-
Smith, M.L.1
Miller, R.R.2
-
40
-
-
0037348691
-
Genetic divergence between cave and surface populations of Astyanax in Mexico (Characidae; Teleostei)
-
Strecker, U., Bernatchez, L., Wilkens, H., 2003. Genetic divergence between cave and surface populations of Astyanax in Mexico (Characidae; Teleostei). Mol. Ecol. 2003, 699-710.
-
(2003)
Mol. Ecol.
, vol.2003
, pp. 699-710
-
-
Strecker, U.1
Bernatchez, L.2
Wilkens, H.3
-
41
-
-
0024298687
-
Convergent evolution of lysozymes?
-
Stewart, C.-B., Schilling, J.W., Wilson, A.C., 1988. Convergent evolution of lysozymes? Nature 332, 787-788.
-
(1988)
Nature
, vol.332
, pp. 787-788
-
-
Stewart, C.-B.1
Schilling, J.W.2
Wilson, A.C.3
-
43
-
-
0001336205
-
Phylogenetic Inference
-
Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Sinauer Associates, Sunderland, MA
-
Swofford, D.L., Olsen, G.J., Addel, P.J., Hillis, D.M., 1996. Phylogenetic Inference. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics. Sinauer Associates, Sunderland, MA, pp. 407-514.
-
(1996)
Molecular Systematics
, pp. 407-514
-
-
Swofford, D.L.1
Olsen, G.J.2
Addel, P.J.3
Hillis, D.M.4
-
44
-
-
0027453388
-
Simple methods for testing the molecular evolutionary clock hypothesis
-
Tajima, F., 1993. Simple methods for testing the molecular evolutionary clock hypothesis. Genetics 135, 599-607.
-
(1993)
Genetics
, vol.135
, pp. 599-607
-
-
Tajima, F.1
-
45
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson, J.D., Higgins, D.G., Gibson, T.J., 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
46
-
-
0000667481
-
New species of troglobitic catfish of the genus Prietella (Siluriformes: Ictaluridae) from northeastern México
-
Walsh, S.J., Gilbert, C.R., 1995. New species of troglobitic catfish of the genus Prietella (Siluriformes: Ictaluridae) from northeastern México. Copeia 1995, 850-860.
-
(1995)
Copeia
, vol.1995
, pp. 850-860
-
-
Walsh, S.J.1
Gilbert, C.R.2
-
47
-
-
0041568326
-
When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders
-
Wiens, J.J., Chippindale, P.T., Hillis, D.M., 2003. When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders. Syst. Biol. 52, 501-514.
-
(2003)
Syst. Biol.
, vol.52
, pp. 501-514
-
-
Wiens, J.J.1
Chippindale, P.T.2
Hillis, D.M.3
-
48
-
-
0036431235
-
Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support
-
Wilcox, T.P., Zwickl, D.J., Heath, T.A., Hillis, D.M., 2002. Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support. Mol. Phylogenet. Evol. 25, 361-371.
-
(2002)
Mol. Phylogenet. Evol.
, vol.25
, pp. 361-371
-
-
Wilcox, T.P.1
Zwickl, D.J.2
Heath, T.A.3
Hillis, D.M.4
-
49
-
-
0000378875
-
Evidence for higher rates of nucleotide substitution in rodents than in man
-
Wu, C.I., Li, W.H., 1985. Evidence for higher rates of nucleotide substitution in rodents than in man. Proc. Natl. Acad. Sci. USA 82, 1741-1745.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 1741-1745
-
-
Wu, C.I.1
Li, W.H.2
-
50
-
-
0242571576
-
Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species
-
Yang, Z., Yoder, A.D., 2003. Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Syst. Biol. 52, 705-716.
-
(2003)
Syst. Biol.
, vol.52
, pp. 705-716
-
-
Yang, Z.1
Yoder, A.D.2
|