X-ray reflectivity studies of cPLA2α-C2 domains adsorbed onto langmuir monolayers of SOPC

Biophysical Journal

Volumn 89, Issue 3, 2005, Pages 1861-1873

  Málková, Šárka ^a   Long, Fei ^a   Stahelin, Robert V ^a   Pingali, Sai V ^a   Murray, Diana ^b   Cho, Wonhwa ^a   Schlossman, Mark L ^a  

^a UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

^b WEILL CORNELL MEDICAL COLLEGE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

1 STEAROYL 2 OLEOYLGLYCERO 3 PHOSPHOCHOLINE; CALCIUM ION; GLYCEROPHOSPHORYLCHOLINE DERIVATIVE; PHOSPHOLIPASE A2; UNCLASSIFIED DRUG;

AQUEOUS SOLUTION; ARTICLE; CRYSTALLOGRAPHY; ELECTRICITY; ENTROPY; LIPID MONOLAYER; MEMBRANE BINDING; X RAY ANALYSIS;

EID: 24144438168     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.105.061515     Document Type: Article

References (60)

1. Cho, W. 2001. Membrane targeting by C1 and C2 domains. J. Biol. Chem. 276:32407-32410.
2. Yang, C., and M. G. Kazanietz. 2003. Divergence and complexities in DAG signaling: looking beyond PKC. Trends Pharmacol. Sci. 24:602-608.
3. Nalefski, E. A., and J. J. Falke. 1996. The C2 domain calcium-binding motif: structural and functional diversity. Protein Sci. 5:2375-2390.
4. 2+ binding domain. J. Biol. Chem. 273:15879-15882.
5. Ferguson, K. M., J. M. Kavran, V. G. Sankaran, E. Fournier, S. J. Isakoff, E. Y. Skolnik, and M. A. Lemmon. 2000. Structural basis for discrimination of 3-phosphoinositides by pleckstrin homology domains. Mol. Cell. 6:373-384.
6. Lemmon, M. A., and K. M. Ferguson. 2000. Signal-dependent membrane targeting by pleckstrin homology (PH) domains. Biochem. J. 350:1-18.
7. Stenmark, H., R. Aasland, and P. C. Driscoll. 2002. The phosphatidylinositol 3-phosphate-binding FYVE finger. FEBS Lett. 513:77-84.
8. Xu, Y., L. F. Seet, B. Hanson, and W. Hong. 2001. The Phox homology (PX) domain, a new player in phosphoinositide signaling. Biochem. J. 360:513-530.
9. De Camilli, P., H. Chen, J. Hyman, E. Panepucci, A. Bateman, and A. T. Brunger. 2002. The ENTH domain. FEBS Lett. 513:11-18.
10. Habermann, B. 2004. The BAR-domain family of proteins: a case of bending and binding? EMBO Rep. 5:250-255.
11. Bretscher, A., K. Edwards, and R. G. Fehon. 2002. ERM proteins and Merlin: integrators at the cell cortex. Nat. Rev. Mol. Cell Biol. 3:586-599.
12. Carroll, K., C. Gomez, and L. Shapiro. 2004. Tubby proteins: the plot thickens. Nat. Rev. Mol. Cell Biol. 5:55-63.
13. Essen, L. O., O. Perisic, D. E. Lynch, M. Katan, and R. L. Williams. 1997. A ternary metal binding site in the C2 domain of phosphoinositide-specific phospholipase C-δ1. Biochemistry. 36:2753-2762.
14. 2. J. Biol. Chem. 273:1596-1604.
15. 2+/phospholipid-binding fold. Cell. 80:929-938.
16. 2+. Structure. 6:1395-1405.
17. 2. J. Mol. Biol. 280:485-500.
18. 2. Biochemistry. 37:17642-17650.
19. Frazier, A. A., M. A, Wisner, N. J, Malmberg, K. G. Victor, G. E. Fanucci, E. A. Nalefski, J. J. Falke, and D. S. Cafiso. 2002. Membrane orientation and position of the C2 domain from cPLA2 by site-directed spin labeling. Biochemistry. 41:6282-6292.
20. Malmberg, N. J., D. R. Van Buskirk, and J, J. Falke. 2003. Membrane-docking loops of the cPLA2 C2 domain: detailed structural analysis of the protein-membrane interface via site-directed spin-labeling. Biochemistry. 42:13227-13240.
21. Frazier, A. A., C. R. Roller, J. J. Havelka, A. Hinderliter, and D. S. Cafiso. 2003. Membrane-bound orientation and position of the synaptotagmin I C2A domain by site-directed spin labeling. Biochemistry. 42:96-105.
22. Bitto, E., M. Li, A. M. Tikhonov, M. L. Schlossman, and W. Cho. 2000. Mechanism of annexin I-mediated membrane aggregation. Biochemistry. 39:13469-13477.
23. Lee, K. Y. C., J. Majewski, T. L. Kuhl, P. B. Howes, K. Kjaer, M. M. Lipp, A. J. Waring, J. A. Zasadzinski, and G. S. Smith. 2001. Synchrotron x-ray study of lung surfactant-specific protein SP-B in lipid monolayers. Biophys. J. 81:572-585.
24. Weygand, M., B. Wetzer, D. Pum, U. B. Sleytr, N. Cuvillier, K. Kjaer, P. B. Howes, and M. Lösche. 1999. Bacterial S-layer protein coupling to lipids: x-ray reflectivity and grazing incidence diffraction studies. Biophys. J. 76:458-468.
25. Möhwald, H., H. Baits, M. Schwendler, C. A. Helm, G. Brezesinski, and H. Haas. 1995. Phospholipid and protein monolayers. Jpn. J. Appl. Phys. 34:3906-3913.
26. Gidalevitz, D., Z. Huang, and S. A. Rice. 1999. Protein folding at the air-water interface studied with x-ray reflectivity. Proc. Natl. Acad. Sci. USA. 96:2608-2611.
27. Gidalevitz, D., Y. Ishitsuka, A. S. Muresan, O. Konovalov, A. J. Waring, R. I. Lehrer, and K. Y. C. Lee. 2003. Interaction of antimicrobial peptide protegrin with biomembranes. Proc. Natl. Acad. Sci. USA. 100:6302-6307.
28. Kohout, S. C., S. Corbalan-Garcia, J. C. Gomez-Fernandez, and J. J. Falke. 2003. C2 domain of protein kinase Cα: elucidation of the membrane docking surface by site-directed fluorescence and spin labeling. Biochemistry. 42:1254-1265.
29. Qin, Z., and D. S. Cafiso. 1996. Membrane structure of protein kinase C and calmodulin binding domain of myristoylated alanine rich C kinase substrate determined by site-directed spin labeling. Biochemistry. 35:2917-2925.
30. 2. J. Biol. Chem. 274:9665-9672.
31. Momsen, W. E., and H. L. Brockman. 1997. Recovery of monomolecular films in studies of lipolysis. Methods Enzymol. 286:292-305.
32. Stahelin, R. V., F. Long, K. Diraviyam, K. S. Bruzik, D. Murray, and W. Cho. 2002. Phosphatidylinositol 3-phosphate induces the membrane penetration of the FYVE domains of Vps27p and Hrs. J. Biol. Chem. 277:26379-26388.
33. Schlossman, M. L., D. Synal, Y. Guan, M. Meron, G. Shea-McGarthy, Z. Huang, A. Acero, S. M. Williams, S. A. Rice, and P. J. Viccaro. 1997. A synchrotron x-ray liquid surface spectrometer. Rev. Sci. Instrum. 68:4372-4384.
34. Born, M., and E. Wolf. 1980. Principles of Optics. Pergamon Press, Oxford, UK.
35. Parratt, L. G. 1954. Surface studies of solids by total reflection of x-rays. Phys. Rev. 95:359-369.
36. Nielsen, J., and D. McMorrow. 2000. Elements of Modern X-Ray Physics. John Wiley and Sons, Chichester, UK.
37. Buff, F. P., R. A. Lovett, and F. H. Stillinger. 1965. Interfacial density profile for fluids in the critical region. Phys. Rev. Lett. 15:621-623.
38. Mitrinović, D. M., A. M. Tikhonov, M. Li, Z. Huang, and M. L. Schlossman. 2000. Noncapillary-wave structure at the water-alkane interface. Phys. Rev. Lett. 85:582-585.
39. Niggemann, G., M. Kummrow, and W. Helfrich. 1995. The bending rigidity of phosphatidylcholine bilayers. Dependence on experimental methods, sample cell sealing and temperature. J. Phys. II. 5:413-425.
40. Vogel, M., C. Münster, W. Fenzl, and T. Salditt. 1999. Thermal unbinding of highly oriented phospholipid membranes. Phys. Rev. Lett. 84:390-393.
41. Thoma, M., M. Schwendler, H. Baltes, C. A. Helm, T. Pfohl, H. Riegler, and H. Möhwald. 1996. Ellipsometry and x-ray reflectivity studies on monolayers of phosphatidylethanolamine and phosphatidylcholine in contact with n-dodecane, n-hexadecane, and bicyclohexyl. Langmuir. 12:1722-1728.
42. Petkova, V., J. J. Benattar, and M. Nedyalkov. 2002. How to control the molecular architecture of a monolayer of proteins supported by a lipid bilayer. Biophys. J. 82:541-548.
43. Liu, Y., and J. F. Nagle. 2004. Diffuse scattering provides material parameters and electron density profiles of biomembranes. Phys. Rev. E. 69:040901-1-040901-4.
44. Nagle, J. F., and S. Tristam-Nagle. 2000. Structure of lipid bilayers. Biochim. Biophys. Acta. 1469:159-195.
45. Pabst, G., M. Rappolt, H. Amenitsch, and P. Laggner. 2000. Structural information from multilamellar liposomes at full hydration: full q-range fitting with high quality x-ray data. Phys. Rev. E. 62:4000-4009.
46. Shi, J., T. J. Blundell, and K. Mizuguchi. 2001. FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. J. Mol. Biol. 310:243-257.
47. Kelley, L. A., R. M. MacCallum, and M. J. Sternberg. 2000. Enhanced genome annotation using structural profiles in the program 3D-PSSM. J. Membr. Biol. 299:499-520.
48. Yee, A., X. Chang, A. Pineda-Lucena, B. Wu, A. Semesi, B. Le, T. Ramelot, G. M. Lee, S. Bhattacharyya, P. Gutierrez, A. Denisov, C. H. Lee, J. R. Cort, G. Kozlov, J. Liao, G. Finak, L. Chen, D. Wishart, W. Lee, L. P. McIntosh, K. Gehring, M. A. Kennedy, A. M. Edwards, and C. H. Arrowsmith. 2002. An NMR approach to structural proteomics. Proc. Natl. Acad. Sci. USA. 99:1825-1830.
49. Berman, H. M., J. Westbrook, Z. Feng, G. Gilliland, T. N. Bhat, H. Weissig, I. N. Shindyalov, and P. E. Bourne. 2000. The Protein Data Bank. Nucleic Acids Res. 28:235-242.
50. Bystroff, C., V. Thorsson, and D. Baker. 2000. HMMSTR: a hidden Markov model for local sequence-structure correlations in proteins. J. Mol. Biol. 301:173-190.
51. Petrey, D., Z. Xiang, C. L. Tang, L. Xie, M. Gimpelev, T. Mitros, C. S. Soto, S. Goldsmith-Fischman, A. Kernytsky, A. Schlessinger, I. Y. Koh, E. Alexov, and B. Honig. 2003. Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling. Proteins. 6(Suppl.):430-435.
52. Wiener, M. C., and S. H. White. 1992. Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. III. Complete structure. Biophys. J. 61:434-447.
53. 2+-independent catalytic domain. J. Biol. Chem. 269:18239-18249.
54. 2+-dependent translocation domain with homology to PKC and GAP. Cell. 65:1043-1051.
55. 2. J. Cell Biol. 145:1219-1232.
56. 2 whereas the C2A domain of synaptotagmin binds membranes electrostatically. J. Biol. Chem. 273:19093-19096.
57. 2 is necessary for its interfacial catalysis and arachidonate specificity. Biochemistry. 37:14128-14136.
58. 2. J. Biol. Chem. 274:14979-14987.
59. 2 translocation to internal membranes. J. Biol. Chem. 276:30150-30160.
60. Murray, D., and B. Honig. 2002. Electrostatic control of the membrane targeting of C2 domains. Mol. Cell. 9:145-154.