-
1
-
-
0037155206
-
Constitutive mutations of the OccR regulatory protein affect DNA bending in response to metabolites released from plant tumors
-
Akakura, R., and Winans, S.C. (2002a) Constitutive mutations of the OccR regulatory protein affect DNA bending in response to metabolites released from plant tumors. J Biol Chem 277: 5866-5874.
-
(2002)
J Biol Chem
, vol.277
, pp. 5866-5874
-
-
Akakura, R.1
Winans, S.C.2
-
2
-
-
0037013257
-
Mutations in the occQ operator that decrease OccR-induced DNA bending do not cause constitutive promoter activity
-
Akakura, R., and Winans, S.C. (2002b) Mutations in the occQ operator that decrease OccR-induced DNA bending do not cause constitutive promoter activity. J Biol Chem 277: 15773-15780.
-
(2002)
J Biol Chem
, vol.277
, pp. 15773-15780
-
-
Akakura, R.1
Winans, S.C.2
-
3
-
-
0025834140
-
Purification and mutant analysis of Citrobacter freundii AmpR, the regulator for chromosomal AmpC beta-lactamase
-
Bartowsky, E., and Normark, S. (1991) Purification and mutant analysis of Citrobacter freundii AmpR, the regulator for chromosomal AmpC beta-lactamase. Mol Microbiol 5: 1715-1725.
-
(1991)
Mol Microbiol
, vol.5
, pp. 1715-1725
-
-
Bartowsky, E.1
Normark, S.2
-
4
-
-
0031039345
-
Altered transcription activation specificity of a mutant form of Bacillus subtilis GltR, a LysR family member
-
Belitsky, B.R., and Sonenshein, A.L. (1997) Altered transcription activation specificity of a mutant form of Bacillus subtilis GltR, a LysR family member. J Bacteriol 179: 1035-1043.
-
(1997)
J Bacteriol
, vol.179
, pp. 1035-1043
-
-
Belitsky, B.R.1
Sonenshein, A.L.2
-
6
-
-
0037188489
-
Synergistic transcriptional activation by one regulatory protein in response to two metabolites
-
Bundy, B.M., Collier, L.S., Hoover, T.R., and Neidle, E.L. (2002) Synergistic transcriptional activation by one regulatory protein in response to two metabolites. Proc Natl Acad Sci USA 99: 7693-7698.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 7693-7698
-
-
Bundy, B.M.1
Collier, L.S.2
Hoover, T.R.3
Neidle, E.L.4
-
7
-
-
0036230993
-
The switch from inorganic to organic sulphur assimilation in Escherichia coli: Adenosine 5′-phosphosulphate (APS) as a signalling molecule for sulphate excess
-
Bykowski, T., van der Ploeg, J.R., Iwanicka-Nowicka, R., and Hryniewicz, M.M. (2002) The switch from inorganic to organic sulphur assimilation in Escherichia coli: adenosine 5′-phosphosulphate (APS) as a signalling molecule for sulphate excess. Mol Microbiol 43: 1347-1358.
-
(2002)
Mol Microbiol
, vol.43
, pp. 1347-1358
-
-
Bykowski, T.1
Van Der Ploeg, J.R.2
Iwanicka-Nowicka, R.3
Hryniewicz, M.M.4
-
8
-
-
0031041234
-
Effector specificitiy mutants of the transcriptional activator NahR of naphthalene degrading Pseudomonas define protein sites involved in binding of aromatic inducers
-
Cebolla, A., Sousa, C., and de Lorenzo, V. (1997) Effector specificitiy mutants of the transcriptional activator NahR of naphthalene degrading Pseudomonas define protein sites involved in binding of aromatic inducers. J Biol Chem 272: 3986-3992.
-
(1997)
J Biol Chem
, vol.272
, pp. 3986-3992
-
-
Cebolla, A.1
Sousa, C.2
De Lorenzo, V.3
-
9
-
-
0035815274
-
Structural basis of the redox switch in the OxyR transcription factor
-
Choi, H., Kim, S., Mukhopadhyay, P., Cho, S., Woo, J., Storz, G., and Ryu, S. (2001) Structural basis of the redox switch in the OxyR transcription factor. Cell 105: 103-113.
-
(2001)
Cell
, vol.105
, pp. 103-113
-
-
Choi, H.1
Kim, S.2
Mukhopadhyay, P.3
Cho, S.4
Woo, J.5
Storz, G.6
Ryu, S.7
-
10
-
-
0027931218
-
Residue threonine-149 of the Salmonella typhimurium CysB transcription activator: Mutations causing constitutive expression of positively regulated genes of the cysteine regulon
-
Colyer, I.E., and Kredich, N.M. (1994) Residue threonine-149 of the Salmonella typhimurium CysB transcription activator: mutations causing constitutive expression of positively regulated genes of the cysteine regulon. Mol Microbiol 13: 797-805.
-
(1994)
Mol Microbiol
, vol.13
, pp. 797-805
-
-
Colyer, I.E.1
Kredich, N.M.2
-
11
-
-
3843085215
-
Analysis in vitro and in vivo of the transcriptional regulator CrgA of Neisseria meningitidis upon contact with target cells
-
Deghmane, A.E., Giorgini, D., Maigre, L., and Taha, M.K. (2004) Analysis in vitro and in vivo of the transcriptional regulator CrgA of Neisseria meningitidis upon contact with target cells. Mol Microbiol 53: 917-927.
-
(2004)
Mol Microbiol
, vol.53
, pp. 917-927
-
-
Deghmane, A.E.1
Giorgini, D.2
Maigre, L.3
Taha, M.K.4
-
12
-
-
0031682152
-
Two functionally distinct regions upstream of the cbb, operon of Rhodobacter sphaeroides regulate gene expression
-
Dubbs, J.M., and Tabita, F.R. (1998) Two functionally distinct regions upstream of the cbb, operon of Rhodobacter sphaeroides regulate gene expression. J Bacteriol 180: 4903-4911.
-
(1998)
J Bacteriol
, vol.180
, pp. 4903-4911
-
-
Dubbs, J.M.1
Tabita, F.R.2
-
13
-
-
0038182517
-
II promoter-operator region with CbbR and RegA (PrrA) regulators indicate distinct mechanisms to control expression of the two cbb operons of Rhodobacter sphaeroides
-
II promoter-operator region with CbbR and RegA (PrrA) regulators indicate distinct mechanisms to control expression of the two cbb operons of Rhodobacter sphaeroides. J Biol Chem 278: 16443-16450.
-
(2003)
J Biol Chem
, vol.278
, pp. 16443-16450
-
-
Dubbs, J.M.1
Tabita, F.R.2
-
14
-
-
0034705569
-
Interaction of CbbR and RegA* transcription regulators with the Rhodobacter sphaeroides cbb, promoter-operator region
-
Dubbs, J.M., Bird, T.H., Bauer, C.E., and Tabita, F.R. (2000) Interaction of CbbR and RegA* transcription regulators with the Rhodobacter sphaeroides cbb, promoter-operator region. J Biol Chem 275: 19224-19230.
-
(2000)
J Biol Chem
, vol.275
, pp. 19224-19230
-
-
Dubbs, J.M.1
Bird, T.H.2
Bauer, C.E.3
Tabita, F.R.4
-
15
-
-
9244265525
-
Effector-mediated interaction of CbbRI and CbbRII regulators with target sequences in Rhodobacter capsulatus
-
Dubbs, P., Dubbs, J.M., and Tabita, F.R. (2004) Effector-mediated interaction of CbbRI and CbbRII regulators with target sequences in Rhodobacter capsulatus. J Bacteriol 186: 8026-8035.
-
(2004)
J Bacteriol
, vol.186
, pp. 8026-8035
-
-
Dubbs, P.1
Dubbs, J.M.2
Tabita, F.R.3
-
16
-
-
0026090458
-
Expression of endogenous and foreign ribulose 1,5-bisphosphate carboxylase-oxygenase (RubisCO) genes in a RubisCO deletion mutant of Rhodobacter sphaeroides
-
Falcone, D.L., and Tabita, F.R. (1991) Expression of endogenous and foreign ribulose 1,5-bisphosphate carboxylase-oxygenase (RubisCO) genes in a RubisCO deletion mutant of Rhodobacter sphaeroides. J Bacteriol 173: 2099-2108.
-
(1991)
J Bacteriol
, vol.173
, pp. 2099-2108
-
-
Falcone, D.L.1
Tabita, F.R.2
-
17
-
-
0023807795
-
Transposon mutagenesis and physiological analysis of strains containing inactivated form I and form II ribulose bisphosphate carboxylase/oxygenase genes in Rhodobacter sphaeroides
-
Falcone, D.L., Quivey, R.G., Jr, and Tabita, F.R. (1988) Transposon mutagenesis and physiological analysis of strains containing inactivated form I and form II ribulose bisphosphate carboxylase/oxygenase genes in Rhodobacter sphaeroides. J Bacteriol 170: 5-11.
-
(1988)
J Bacteriol
, vol.170
, pp. 5-11
-
-
Falcone, D.L.1
Quivey Jr., R.G.2
Tabita, F.R.3
-
18
-
-
0035888972
-
Expression and purification of recombinant human c-Fos/c-Jun that is highly active in DNA binding and transcriptional activation in vitro
-
Ferguson, H.A., and Goodrich, J.A. (2001) Expression and purification of recombinant human c-Fos/c-Jun that is highly active in DNA binding and transcriptional activation in vitro. Nucleic Acids Res 29: E98.
-
(2001)
Nucleic Acids Res
, vol.29
-
-
Ferguson, H.A.1
Goodrich, J.A.2
-
19
-
-
0000527903
-
Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans
-
Figurski, D.H., and Helinski, D.R. (1979) Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc Natl Acad Sci USA 76: 1648-1652.
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 1648-1652
-
-
Figurski, D.H.1
Helinski, D.R.2
-
20
-
-
0033694693
-
Activation of the Anabaena nir operon promoter requires both NtcA (CAP family) and NtcB (LysR family) transcription factors
-
Frias, J.E., Flores, E., and Herrero, A. (2000) Activation of the Anabaena nir operon promoter requires both NtcA (CAP family) and NtcB (LysR family) transcription factors. Mol Microbiol 38: 613-625.
-
(2000)
Mol Microbiol
, vol.38
, pp. 613-625
-
-
Frias, J.E.1
Flores, E.2
Herrero, A.3
-
21
-
-
0029161078
-
Characterization of the Escherichia coli gcvR gene encoding a negative regulator of gcv expression
-
Ghrist, A.C., and Stauffer, G.V. (1995) Characterization of the Escherichia coli gcvR gene encoding a negative regulator of gcv expression. J Bacteriol 177: 4980-4984.
-
(1995)
J Bacteriol
, vol.177
, pp. 4980-4984
-
-
Ghrist, A.C.1
Stauffer, G.V.2
-
22
-
-
0027165454
-
Nucleotide sequence and functional analysis of CbbR, a positive regulator of the Calvin cycle operons of Rhodobacter sphaeroides
-
Gibson, J.L., and Tabita, F.R. (1993) Nucleotide sequence and functional analysis of CbbR, a positive regulator of the Calvin cycle operons of Rhodobacter sphaeroides. J Bacteriol 175: 5778-5784.
-
(1993)
J Bacteriol
, vol.175
, pp. 5778-5784
-
-
Gibson, J.L.1
Tabita, F.R.2
-
23
-
-
0036882111
-
2 fixation operons of Rhodobacter sphaeroides by the Prr/Reg two-component system during chemoautotrophic growth
-
2 fixation operons of Rhodobacter sphaeroides by the Prr/Reg two-component system during chemoautotrophic growth. J Bacteriol 184: 6654-6664.
-
(2002)
J Bacteriol
, vol.184
, pp. 6654-6664
-
-
Gibson, J.L.1
Dubbs, J.M.2
Tabita, F.R.3
-
25
-
-
0031473847
-
SWISS-MODEL and the Swiss-Pdb Viewer: An environment for comparative protein modeling
-
Guex, N., and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-Pdb Viewer: an environment for comparative protein modeling. Electrophoresis 18: 2714-2723.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
26
-
-
0025992172
-
The cysP promoter of Salmonella typhimurium: Characterization of two binding sites for CysB protein, studies of in vivo transcription initiation, and demonstration of the anti-inducer effects of thiosulfate
-
Hryniewicz, M.M., and Kredich, N.M. (1991) The cysP promoter of Salmonella typhimurium: characterization of two binding sites for CysB protein, studies of in vivo transcription initiation, and demonstration of the anti-inducer effects of thiosulfate. J Bacteriol 173: 5876-5886.
-
(1991)
J Bacteriol
, vol.173
, pp. 5876-5886
-
-
Hryniewicz, M.M.1
Kredich, N.M.2
-
27
-
-
0028247111
-
Stoichiometry of binding of CysB to the cysJIH, cysK, and cysP promoter regions of Salmonella typhimurium
-
Hryniewicz, M.M., and Kredich, N.M. (1994) Stoichiometry of binding of CysB to the cysJIH, cysK, and cysP promoter regions of Salmonella typhimurium. J Bacteriol 176: 3673-3682.
-
(1994)
J Bacteriol
, vol.176
, pp. 3673-3682
-
-
Hryniewicz, M.M.1
Kredich, N.M.2
-
28
-
-
0032808781
-
Isolation and characterization of mutations in the Escherichia coli regulatory protein XapR
-
Jorgensen, C., and Dandanell, G. (1999) Isolation and characterization of mutations in the Escherichia coli regulatory protein XapR. J Bacteriol 181: 4397-4403.
-
(1999)
J Bacteriol
, vol.181
, pp. 4397-4403
-
-
Jorgensen, C.1
Dandanell, G.2
-
29
-
-
0022479426
-
Independent regulation of synthesis of form I and form II ribulose bisphosphate carboxylase-oxygenase in Rhodopseudomonas sphaeroides
-
Jouanneau, Y., and Tabita, F.R. (1986) Independent regulation of synthesis of form I and form II ribulose bisphosphate carboxylase-oxygenase in Rhodopseudomonas sphaeroides. J Bacteriol 165: 620.
-
(1986)
J Bacteriol
, vol.165
, pp. 620
-
-
Jouanneau, Y.1
Tabita, F.R.2
-
30
-
-
0034723136
-
CcpC, a novel regulator of the LysR family required for glucose repression of the citB gene in Bacillus subtilis
-
Jourlin-Castelli, C., Mani, N., Nakano, M.M., and Sonenshein, A.L. (2000) CcpC, a novel regulator of the LysR family required for glucose repression of the citB gene in Bacillus subtilis. J Mol Biol 295: 865-878.
-
(2000)
J Mol Biol
, vol.295
, pp. 865-878
-
-
Jourlin-Castelli, C.1
Mani, N.2
Nakano, M.M.3
Sonenshein, A.L.4
-
32
-
-
0037013155
-
OxyR: A molecular code for redox-related signaling
-
Kim, S.O., Merchant, K., Nudelman, R., Beyer, W.F., Jr, Keng, T., DeAngelo, J., et al. (2002) OxyR: a molecular code for redox-related signaling. Cell 109: 383-396.
-
(2002)
Cell
, vol.109
, pp. 383-396
-
-
Kim, S.O.1
Merchant, K.2
Nudelman, R.3
Beyer Jr., W.F.4
Keng, T.5
DeAngelo, J.6
-
33
-
-
0242720660
-
Mechanism of repression by Bacillus subtilis CcpC, a LysR family regulator
-
Kim, S.I., Jourlin-Castelli, C., Wellington, S.R., and Sonenshein, A.L. (2003) Mechanism of repression by Bacillus subtilis CcpC, a LysR family regulator. J Mol Biol 334: 609-624.
-
(2003)
J Mol Biol
, vol.334
, pp. 609-624
-
-
Kim, S.I.1
Jourlin-Castelli, C.2
Wellington, S.R.3
Sonenshein, A.L.4
-
34
-
-
0019904249
-
Wide host range cloning vectors: A cosmid clone bank of an Agrobacterium Ti plasmid
-
Knauf, V.C., and Nester, E.W. (1982) Wide host range cloning vectors: a cosmid clone bank of an Agrobacterium Ti plasmid. Plasmid 8: 45-54.
-
(1982)
Plasmid
, vol.8
, pp. 45-54
-
-
Knauf, V.C.1
Nester, E.W.2
-
35
-
-
0028965108
-
Mutational analysis of the redox-sensitive transcriptional regulator OxyR: Regions important for oxidation and transcriptional activation
-
Kullik, I., Toledano, M.B., Tartaglia, L.A., and Storz, G. (1995a) Mutational analysis of the redox-sensitive transcriptional regulator OxyR: regions important for oxidation and transcriptional activation. J Bacteriol 177: 1275-1284.
-
(1995)
J Bacteriol
, vol.177
, pp. 1275-1284
-
-
Kullik, I.1
Toledano, M.B.2
Tartaglia, L.A.3
Storz, G.4
-
36
-
-
0028930138
-
Mutational analysis of the redox-sensitive transcriptional regulator OxyR: Regions important for DNA binding and multimerization
-
Kullik, I., Stevens, J., Toledano, M.B., and Storz, G. (1995b) Mutational analysis of the redox-sensitive transcriptional regulator OxyR: regions important for DNA binding and multimerization. J Bacteriol 177: 1285-1291.
-
(1995)
J Bacteriol
, vol.177
, pp. 1285-1291
-
-
Kullik, I.1
Stevens, J.2
Toledano, M.B.3
Storz, G.4
-
37
-
-
0028228427
-
The Alcaligenes eutrophus H16 hoxX gene participates in hydrogenase regulation
-
Lenz, O., Scwartz, E., Dernedde, J., Eitinger, M., and Friedrich, B. (1994) The Alcaligenes eutrophus H16 hoxX gene participates in hydrogenase regulation. J Bacteriol 176: 4385-4393.
-
(1994)
J Bacteriol
, vol.176
, pp. 4385-4393
-
-
Lenz, O.1
Scwartz, E.2
Dernedde, J.3
Eitinger, M.4
Friedrich, B.5
-
38
-
-
0035910541
-
Functional dissection of the LysR-type CysB transcriptional regulator. Regions important for DNA binding, inducer response, oligomerization, and positive control
-
Lochowska, A., Iwanicka-Nowicka, R., Plochocka, D., and Hryniewicz, M.M. (2001) Functional dissection of the LysR-type CysB transcriptional regulator. Regions important for DNA binding, inducer response, oligomerization, and positive control. J Biolchem 276: 2098-2107.
-
(2001)
J Biolchem
, vol.276
, pp. 2098-2107
-
-
Lochowska, A.1
Iwanicka-Nowicka, R.2
Plochocka, D.3
Hryniewicz, M.M.4
-
39
-
-
3843122191
-
Identification of activating region (AR) of Escherichia coli LysR-type transcription factor CysB and CysB contact site on RNA polymerase alpha subunit at the cysP promoter
-
Lochowska, A., Iwanicka-Nowicka, R., Zaim, J., Witkowska-Zimny, M., Bolewska, K., and Hryniewicz, M.M. (2004) Identification of activating region (AR) of Escherichia coli LysR-type transcription factor CysB and CysB contact site on RNA polymerase alpha subunit at the cysP promoter. Mol Microbiol 53: 791-806.
-
(2004)
Mol Microbiol
, vol.53
, pp. 791-806
-
-
Lochowska, A.1
Iwanicka-Nowicka, R.2
Zaim, J.3
Witkowska-Zimny, M.4
Bolewska, K.5
Hryniewicz, M.M.6
-
40
-
-
0030974367
-
2-Chloromuconate and ClcR-mediated activation of the clcABD operon: In vitro transcriptional and DNase I footprint analyses
-
McFall, S.M., Parsek, M.R., and Chakrabarty, A.M. (1997) 2-Chloromuconate and ClcR-mediated activation of the clcABD operon: in vitro transcriptional and DNase I footprint analyses. J Bacteriol 179: 3655-3663.
-
(1997)
J Bacteriol
, vol.179
, pp. 3655-3663
-
-
McFall, S.M.1
Parsek, M.R.2
Chakrabarty, A.M.3
-
41
-
-
0018178434
-
A modification of the Lowry procedure to simplify protein determination in membrane and lipoprotein samples
-
Markwell, M.A., Haas, S.M., Bieber, L.L., and Tolbert, N.E. (1978) A modification of the Lowry procedure to simplify protein determination in membrane and lipoprotein samples. Anal Biochem 87: 206-210.
-
(1978)
Anal Biochem
, vol.87
, pp. 206-210
-
-
Markwell, M.A.1
Haas, S.M.2
Bieber, L.L.3
Tolbert, N.E.4
-
42
-
-
0003842951
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Miller, J.H. (1992) A Short Course in Bacterial Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, pp. 143-149.
-
(1992)
A Short Course in Bacterial Genetics
, pp. 143-149
-
-
Miller, J.H.1
-
43
-
-
0344406163
-
Crystal structure of a full-length LysR-type transcriptional regulator, CbnR: Unusual combination of two subunit forms and molecular bases for causing and changing DNA bend
-
Muraoka, S., Okumura, R., Ogawa, N., Nonaka, T., Miyashita, K., and Senda, T. (2003) Crystal structure of a full-length LysR-type transcriptional regulator, CbnR: unusual combination of two subunit forms and molecular bases for causing and changing DNA bend. J Mol Biol 328: 555-566.
-
(2003)
J Mol Biol
, vol.328
, pp. 555-566
-
-
Muraoka, S.1
Okumura, R.2
Ogawa, N.3
Nonaka, T.4
Miyashita, K.5
Senda, T.6
-
44
-
-
50549188450
-
Light dependent utilization of organic compounds and photoproduction of hydrogen by photosynthetic bacteria: Relationship with nitrogen metabolism
-
Ormerod, J.G., Ormerod, K.D., and Gest, H. (1961) Light dependent utilization of organic compounds and photoproduction of hydrogen by photosynthetic bacteria: relationship with nitrogen metabolism. Arch Biochem Biophys 94: 449-463.
-
(1961)
Arch Biochem Biophys
, vol.94
, pp. 449-463
-
-
Ormerod, J.G.1
Ormerod, K.D.2
Gest, H.3
-
45
-
-
0029614795
-
Expression of the cbbLcbbS and cbbM genes and distinct organization of the ebb Calvin cycle structural genes of Rhodobacter capsulatus
-
Paoli, G.C., Morgan, N.S., Tabita, F.R., and Shively, J.M. (1995) Expression of the cbbLcbbS and cbbM genes and distinct organization of the ebb Calvin cycle structural genes of Rhodobacter capsulatus. Arch Microbiol 164: 396-405.
-
(1995)
Arch Microbiol
, vol.164
, pp. 396-405
-
-
Paoli, G.C.1
Morgan, N.S.2
Tabita, F.R.3
Shively, J.M.4
-
46
-
-
0031876149
-
Physiological control and regulation of the Rhodobacter capsulatus cbb operons
-
Paoli, G.G., Vichivanives, P., and Tabita, F.R. (1998) Physiological control and regulation of the Rhodobacter capsulatus cbb operons. J Bacteriol 180: 4258-4269.
-
(1998)
J Bacteriol
, vol.180
, pp. 4258-4269
-
-
Paoli, G.G.1
Vichivanives, P.2
Tabita, F.R.3
-
47
-
-
0026495342
-
Roles of CatR and cis,cis-muconate in activation of the catBC operon, which is involved in benzoate degradation in Pseudomonas putida
-
Parsek, M.R., Shinabarger, D.L., Rothmel, R.K., and Chakrabarty, A.M. (1992) Roles of CatR and cis,cis-muconate in activation of the catBC operon, which is involved in benzoate degradation in Pseudomonas putida. J Bacteriol 174: 7798-7806.
-
(1992)
J Bacteriol
, vol.174
, pp. 7798-7806
-
-
Parsek, M.R.1
Shinabarger, D.L.2
Rothmel, R.K.3
Chakrabarty, A.M.4
-
48
-
-
0028565028
-
Interaction of two LysR-type regulatory proteins CatR and ClcR with heterologous promoters: Functional and evolutionary implications
-
Parsek, M.R., McFall, S.M., Shinabarger, D.L., and Chakrabarty, A.M. (1994) Interaction of two LysR-type regulatory proteins CatR and ClcR with heterologous promoters: functional and evolutionary implications. Proc Natl Acad Sci USA 91: 12393-12397.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12393-12397
-
-
Parsek, M.R.1
McFall, S.M.2
Shinabarger, D.L.3
Chakrabarty, A.M.4
-
49
-
-
0028969228
-
Differential DNA bending introduced by the Pseudomonas putida LysR-type regulator, CatR, at the plasmid-borne pheBA and chromosomal catBC promoters
-
Parsek, M.R., Kivisaar, M., and Chakrabarty, A.M. (1995) Differential DNA bending introduced by the Pseudomonas putida LysR-type regulator, CatR, at the plasmid-borne pheBA and chromosomal catBC promoters. Mol Microbiol 15: 819-828.
-
(1995)
Mol Microbiol
, vol.15
, pp. 819-828
-
-
Parsek, M.R.1
Kivisaar, M.2
Chakrabarty, A.M.3
-
50
-
-
0029004590
-
Protein modeling by E-mail
-
Pietsch, M.C. (1995) Protein modeling by E-mail. Biotechnology 13: 658-660.
-
(1995)
Biotechnology
, vol.13
, pp. 658-660
-
-
Pietsch, M.C.1
-
51
-
-
1842301086
-
DNA bending by the Trpl protein of Pseudomonas aeruginosa
-
Pineiro, S., Olekhnovich, I., and Gussin, G.N. (1997) DNA bending by the Trpl protein of Pseudomonas aeruginosa. J Bacteriol 179: 5407-5413.
-
(1997)
J Bacteriol
, vol.179
, pp. 5407-5413
-
-
Pineiro, S.1
Olekhnovich, I.2
Gussin, G.N.3
-
52
-
-
0021592032
-
In vitro insertional mutagenesis with a selectable DNA fragment
-
Prentki, P., and Krisch, H.M. (1984) In vitro insertional mutagenesis with a selectable DNA fragment. Gene 29: 303-313.
-
(1984)
Gene
, vol.29
, pp. 303-313
-
-
Prentki, P.1
Krisch, H.M.2
-
53
-
-
1542275267
-
Effects of oxygen and light intensity on transcriptome expression in Rhodobacter sphaeroides 2.4.1. Redox active gene expression profile
-
Roh, J.H., Smith, W.E., and Kaplan, S. (2004) Effects of oxygen and light intensity on transcriptome expression in Rhodobacter sphaeroides 2.4.1. Redox active gene expression profile. J Biol Chem 279: 9146-9155.
-
(2004)
J Biol Chem
, vol.279
, pp. 9146-9155
-
-
Roh, J.H.1
Smith, W.E.2
Kaplan, S.3
-
54
-
-
0027446708
-
Molecular biology of the LysR family of transcriptional regulators
-
Schell, M.A. (1993) Molecular biology of the LysR family of transcriptional regulators. Ann Rev Microbiol 47: 597-626.
-
(1993)
Ann Rev Microbiol
, vol.47
, pp. 597-626
-
-
Schell, M.A.1
-
55
-
-
0025214239
-
Use of saturation mutagenesis to localize probably functional domains in the NahR protein, a lysR-type transcription activator
-
Schell, M.A., Brown, P.M., and Raju, S. (1990) Use of saturation mutagenesis to localize probably functional domains in the NahR protein, a lysR-type transcription activator. J Biol Chem 265: 3844-3850.
-
(1990)
J Biol Chem
, vol.265
, pp. 3844-3850
-
-
Schell, M.A.1
Brown, P.M.2
Raju, S.3
-
56
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
Schwede, T., Kopp, J., Guex, N., and Peitsch, M.C. (2003) SWISS-MODEL: An automated protein homology-modeling server. Nucleic Acids Res 31: 3381-3385.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
57
-
-
0021064523
-
New versatile plasmid vectors for expression of hybrid proteins coded by a cloned gene fused to lacZ gene sequences encoding an enzymatically active carboxy-terminal portion of beta-galactosidase
-
Shapira, S.K., Chou, J., Richaud, F.V., and Casadaban, M.J. (1983) New versatile plasmid vectors for expression of hybrid proteins coded by a cloned gene fused to lacZ gene sequences encoding an enzymatically active carboxy-terminal portion of beta-galactosidase. Gene 25: 71-82.
-
(1983)
Gene
, vol.25
, pp. 71-82
-
-
Shapira, S.K.1
Chou, J.2
Richaud, F.V.3
Casadaban, M.J.4
-
58
-
-
2942741120
-
Development of a bacterial biosensor for nitrotoluenes: The crystal structure of the transcriptional regulator DntR
-
Smirnova, I.A., Dian, C., Leonard, G.A., McSweeney, S., Birse, D., and Brzezinski, P. (2004) Development of a bacterial biosensor for nitrotoluenes: the crystal structure of the transcriptional regulator DntR. J Mol Biol 340: 405-418.
-
(2004)
J Mol Biol
, vol.340
, pp. 405-418
-
-
Smirnova, I.A.1
Dian, C.2
Leonard, G.A.3
McSweeney, S.4
Birse, D.5
Brzezinski, P.6
-
59
-
-
0036888988
-
II operons during photoheterotrophic growth of a ribulose 1,5-bisphosphate carboxylase-oxygenase deletion mutant of Rhodobacter sphaeroides
-
II operons during photoheterotrophic growth of a ribulose 1,5-bisphosphate carboxylase-oxygenase deletion mutant of Rhodobacter sphaeroides. J Bacteriol 184: 6721-6724.
-
(2002)
J Bacteriol
, vol.184
, pp. 6721-6724
-
-
Smith, S.A.1
Tabita, F.R.2
-
60
-
-
0025283867
-
Use of T7 RNA polymerase to direct expression of cloned genes
-
Studier, F.W., Rosenberg, A.H., Dunn, J.J., and Dubendorff, J.W. (1990) Use of T7 RNA polymerase to direct expression of cloned genes. Methods Enzymol 185: 60-89.
-
(1990)
Methods Enzymol
, vol.185
, pp. 60-89
-
-
Studier, F.W.1
Rosenberg, A.H.2
Dunn, J.J.3
Dubendorff, J.W.4
-
61
-
-
0024419123
-
Physical and genetic mapping of the Rhodobacter sphaeroides 2.4.1 genome: Genome size, fragment identification, and gene localization
-
Suwanto, A., and Kaplan, S. (1989) Physical and genetic mapping of the Rhodobacter sphaeroides 2.4.1 genome: genome size, fragment identification, and gene localization. J Bacteriol 171: 5840-5849.
-
(1989)
J Bacteriol
, vol.171
, pp. 5840-5849
-
-
Suwanto, A.1
Kaplan, S.2
-
62
-
-
0035338153
-
CbbR, a LysR-type transcriptional regulator from Hydrogenophilus thermoluteolus, binds two cbb promoter regions
-
Terazono, K., Hayashi, N.R., and Igarashi, Y. (2001) CbbR, a LysR-type transcriptional regulator from Hydrogenophilus thermoluteolus, binds two cbb promoter regions. FEMS Microbiol Lett 198: 151-157.
-
(2001)
FEMS Microbiol Lett
, vol.198
, pp. 151-157
-
-
Terazono, K.1
Hayashi, N.R.2
Igarashi, Y.3
-
63
-
-
0036211185
-
Metabolic signals that lead to control of cbb gene expression in Rhodobacter capsulatus
-
Tichi, M.A., and Tabita, F.R. (2002) Metabolic signals that lead to control of cbb gene expression in Rhodobacter capsulatus. J Bacteriol 184: 1905-1915.
-
(2002)
J Bacteriol
, vol.184
, pp. 1905-1915
-
-
Tichi, M.A.1
Tabita, F.R.2
-
64
-
-
0028023175
-
Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: A mechanism for differential promoter selection
-
Toledano, M.B., Kullik, I., Trinh, F., Baird, P.T., Schneider, T.D., and Storz, G. (1994) Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: a mechanism for differential promoter selection. Cell 78: 897-909.
-
(1994)
Cell
, vol.78
, pp. 897-909
-
-
Toledano, M.B.1
Kullik, I.2
Trinh, F.3
Baird, P.T.4
Schneider, T.D.5
Storz, G.6
-
65
-
-
0031571642
-
The structure of the cofactor-binding fragment of the LysR family member, CysB: A familiar fold with a surprising subunit arrangement
-
Tyrrell, R., Verschueren, K.H., Dodson, E.J., Murshudov, G.N., Addy, C., and Wilkinson, A.J. (1997) The structure of the cofactor-binding fragment of the LysR family member, CysB: a familiar fold with a surprising subunit arrangement. Structures: 1017-1032.
-
(1997)
Structures
, pp. 1017-1032
-
-
Tyrrell, R.1
Verschueren, K.H.2
Dodson, E.J.3
Murshudov, G.N.4
Addy, C.5
Wilkinson, A.J.6
-
66
-
-
0034725524
-
Multiple regulators and their interactions in vivo and in vitro with the ebb regulons of Rhodobacter capsulatus
-
Vichivanives, P., Bird, T.H., Bauer, C.E., and Robert, T.F. (2000) Multiple regulators and their interactions in vivo and in vitro with the ebb regulons of Rhodobacter capsulatus. J Mol Biol 300: 1079-1099.
-
(2000)
J Mol Biol
, vol.300
, pp. 1079-1099
-
-
Vichivanives, P.1
Bird, T.H.2
Bauer, C.E.3
Robert, T.F.4
-
67
-
-
0026694444
-
The A. tumefaciens transcriptional activator OccR causes a bend at a target promoter, which is partially relaxed by a plant tumor metabolite
-
Wang, L., Helmann, J.D., and Winans, S.C. (1992) The A. tumefaciens transcriptional activator OccR causes a bend at a target promoter, which is partially relaxed by a plant tumor metabolite. Cell 69: 659-667.
-
(1992)
Cell
, vol.69
, pp. 659-667
-
-
Wang, L.1
Helmann, J.D.2
Winans, S.C.3
-
68
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
-
Yanish-Perron, C., Vieira, J., and Messing, J. (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33: 103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanish-Perron, C.1
Vieira, J.2
Messing, J.3
-
69
-
-
0017111944
-
Map of genes for carotenoid and bacteriochlorophyll biosynthesis in Rhodopseudomonas capsulata
-
Yen, H.C., and Marrs, B. (1976) Map of genes for carotenoid and bacteriochlorophyll biosynthesis in Rhodopseudomonas capsulata. J Bacteriol 126: 619-629.
-
(1976)
J Bacteriol
, vol.126
, pp. 619-629
-
-
Yen, H.C.1
Marrs, B.2
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