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Volumn 35, Issue 8, 2005, Pages 799-814

Comparative analysis of BAC and whole genome shotgun sequences from an Anopheles gambiae region related to Plasmodium encapsulation

Author keywords

Annotation; BAC end sequence; BEL; Genome; Indy; Pen 1

Indexed keywords

ANOPHELES GAMBIAE; BACTERIA (MICROORGANISMS); DROSOPHILA MELANOGASTER; INSECTA; VERTEBRATA;

EID: 23844455713     PISSN: 09651748     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ibmb.2005.02.020     Document Type: Article
Times cited : (4)

References (37)
  • 3
    • 0030267566 scopus 로고    scopus 로고
    • Pegasus, a small terminal inverted repeat transposable element found in the white gene of Anopheles gambiae
    • Besansky, N.J., Mukabayire, O., Bedell, J.A., Lusz, H., 1996. Pegasus, a small terminal inverted repeat transposable element found in the white gene of Anopheles gambiae. Genetica 98, 119-129.
    • (1996) Genetica , vol.98 , pp. 119-129
    • Besansky, N.J.1    Mukabayire, O.2    Bedell, J.A.3    Lusz, H.4
  • 4
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • Burge, C., Karlin, S., 1997. Prediction of complete gene structures in human genomic DNA. J. Mol. Biol. 268, 78-94.
    • (1997) J. Mol. Biol. , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 6
    • 0030755075 scopus 로고    scopus 로고
    • Progress in the map-based cloning of the Anopheles gambiae genes responsible for the encapsulation of malarial parasites
    • Collins, F.H., Zheng, L., Paskewitz, S.M., Kafatos, F.C., 1997. Progress in the map-based cloning of the Anopheles gambiae genes responsible for the encapsulation of malarial parasites. Ann. Trop. Med. Parasitol. 91, 517-521.
    • (1997) Ann. Trop. Med. Parasitol. , vol.91 , pp. 517-521
    • Collins, F.H.1    Zheng, L.2    Paskewitz, S.M.3    Kafatos, F.C.4
  • 8
    • 0030910976 scopus 로고    scopus 로고
    • Camguk, Lin-2, and CASK: Novel membrane-associated guanylate kinase homologs that also contain CaM kinase domains
    • Dimitratos, S.D., Woods, D.F., Bryant, P.J., 1997. Camguk, Lin-2, and CASK: novel membrane-associated guanylate kinase homologs that also contain CaM kinase domains. Mech. Dev. 63, 127-130.
    • (1997) Mech. Dev. , vol.63 , pp. 127-130
    • Dimitratos, S.D.1    Woods, D.F.2    Bryant, P.J.3
  • 9
    • 0030929643 scopus 로고    scopus 로고
    • LASSAP, a LArge Scale Sequence compArison Package
    • Glement, E., Codani, J.J., 1997. LASSAP, a LArge Scale Sequence compArison Package. Comput. Appl. Biosci. 13, 137-143.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 137-143
    • Glement, E.1    Codani, J.J.2
  • 10
    • 22544437254 scopus 로고    scopus 로고
    • Pilot Anopheles gambiae full-length cDNA study: Sequencing and initial characterization of 35,575 clones
    • Gomez, S.M., Eiglmeier, K., Segurens, B., Dehoux, P., Couloux, A., Scarpelli, C., et al., 2005. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Genome Biol. 6 (4), R39.
    • (2005) Genome Biol. , vol.6 , Issue.4
    • Gomez, S.M.1    Eiglmeier, K.2    Segurens, B.3    Dehoux, P.4    Couloux, A.5    Scarpelli, C.6
  • 13
    • 0034710157 scopus 로고    scopus 로고
    • The evolution of cell adhesion
    • Hynes, R.O., Zhao, Q., 2000. The evolution of cell adhesion. J. Cell. Biol. 150, F89-F96.
    • (2000) J. Cell. Biol. , vol.150
    • Hynes, R.O.1    Zhao, Q.2
  • 15
    • 0036021406 scopus 로고    scopus 로고
    • Dasheng: A recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice
    • Jiang, N., Bao, Z., Temnykh, S., Cheng, Z., Jiang, J., Wing, R.A., McCouch, S.R., Wessler, S.R., 2002. Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice. Genetics 161, 1293-1305.
    • (2002) Genetics , vol.161 , pp. 1293-1305
    • Jiang, N.1    Bao, Z.2    Temnykh, S.3    Cheng, Z.4    Jiang, J.5    Wing, R.A.6    McCouch, S.R.7    Wessler, S.R.8
  • 16
    • 27644469623 scopus 로고    scopus 로고
    • RETRO60_AG_LTR: LTR retrotransposon from Anopheles gambiae
    • Jurka, J., Drazkiewicz, A., 2002. RETRO60_AG_LTR: LTR retrotransposon from Anopheles gambiae. Repbase Rep. 2 (12), 21.
    • (2002) Repbase Rep. , vol.2 , Issue.12 , pp. 21
    • Jurka, J.1    Drazkiewicz, A.2
  • 17
    • 27644546866 scopus 로고    scopus 로고
    • P2_AG: A family of P-like DNA transposons from African malaria mosquito
    • Kapitonov, V.V., Jurka, J., 2002a. P2_AG: a family of P-like DNA transposons from African malaria mosquito. Repbase Rep. 2 (11), 22.
    • (2002) Repbase Rep. , vol.2 , Issue.11 , pp. 22
    • Kapitonov, V.V.1    Jurka, J.2
  • 18
    • 27644511001 scopus 로고    scopus 로고
    • TRANSIB1_AG: A family of TRANSIB-like DNA transposons from African malaria mosquito
    • Kapitonov, V.V., Jurka, J., 2002b. TRANSIB1_AG: a family of TRANSIB-like DNA transposons from African malaria mosquito. Repbase Rep. 2 (11), 26.
    • (2002) Repbase Rep. , vol.2 , Issue.11 , pp. 26
    • Kapitonov, V.V.1    Jurka, J.2
  • 19
    • 27644443398 scopus 로고    scopus 로고
    • SINEX-1_AG, a family of nonautonomous non-LTR retrotransposons from African malaria mosquito
    • Kapitonov, V.V., Jurka, J., 2004. SINEX-1_AG, a family of nonautonomous non-LTR retrotransposons from African malaria mosquito. Repbase Rep. 4 (2), 44.
    • (2004) Repbase Rep. , vol.4 , Issue.2 , pp. 44
    • Kapitonov, V.V.1    Jurka, J.2
  • 20
    • 27644438444 scopus 로고    scopus 로고
    • BEL11_AG, a family of Bel/Pao-like LTR retrotransposons from African malaria mosquito
    • Kapitonov, V.V., Pavlicek, A., Drazkiewicz, A., Jurka, J., 2003. BEL11_AG, a family of Bel/Pao-like LTR retrotransposons from African malaria mosquito. Repbase Rep 3 (3), 3.
    • (2003) Repbase Rep , vol.3 , Issue.3 , pp. 3
    • Kapitonov, V.V.1    Pavlicek, A.2    Drazkiewicz, A.3    Jurka, J.4
  • 21
    • 0028369701 scopus 로고
    • A technique for nucleic acid in situ hybridization to polytene chromosomes of mosquitoes in the Anopheles gambiae complex
    • Kumar, V., Collins, F.H., 1994. A technique for nucleic acid in situ hybridization to polytene chromosomes of mosquitoes in the Anopheles gambiae complex. Insect. Mol. Biol. 3, 41-47.
    • (1994) Insect. Mol. Biol. , vol.3 , pp. 41-47
    • Kumar, V.1    Collins, F.H.2
  • 22
    • 0032191192 scopus 로고    scopus 로고
    • Murine CASK is disrupted in a sex-linked cleft palate mouse mutant
    • Laverty, H.G., Wilson, J.B., 1998. Murine CASK is disrupted in a sex-linked cleft palate mouse mutant. Genomics 53, 29-41.
    • (1998) Genomics , vol.53 , pp. 29-41
    • Laverty, H.G.1    Wilson, J.B.2
  • 23
    • 0029922260 scopus 로고    scopus 로고
    • A new Drosophila Ca2+/calmodulin-dependent protein kinase (Caki) is localized in the central nervous system and implicated in walking speed
    • Martin, J.R., Ollo, R., 1996. A new Drosophila Ca2+/calmodulin-dependent protein kinase (Caki) is localized in the central nervous system and implicated in walking speed. EMBO J. 15, 1865-1876.
    • (1996) EMBO J. , vol.15 , pp. 1865-1876
    • Martin, J.R.1    Ollo, R.2
  • 24
    • 0037433054 scopus 로고    scopus 로고
    • LTR_STRUC: A novel search and identification program for LTR retrotransposons
    • McCarthy, E.M., McDonald, J.F., 2003. LTR_STRUC: a novel search and identification program for LTR retrotransposons. Bioinformatics 19, 362-367.
    • (2003) Bioinformatics , vol.19 , pp. 362-367
    • McCarthy, E.M.1    McDonald, J.F.2
  • 25
    • 0029942875 scopus 로고    scopus 로고
    • Distribution of T1, Q, Pegasus and mariner transposable elements on the polytene chromosomes of PEST, a standard strain of Anopheles gambiae
    • Mukabayire, O., Besansky, N.J., 1996. Distribution of T1, Q, Pegasus and mariner transposable elements on the polytene chromosomes of PEST, a standard strain of Anopheles gambiae. Chromosoma 104, 585-595.
    • (1996) Chromosoma , vol.104 , pp. 585-595
    • Mukabayire, O.1    Besansky, N.J.2
  • 26
    • 0033179759 scopus 로고    scopus 로고
    • Resident aliens: The Tc1/ mariner superfamily of transposable elements
    • Plasterk, R.H.A., Izsvak, Z., Ivics, Z., 1999. Resident aliens: the Tc1/ mariner superfamily of transposable elements. Trends Genet. 15, 326-332.
    • (1999) Trends Genet. , vol.15 , pp. 326-332
    • Plasterk, R.H.A.1    Izsvak, Z.2    Ivics, Z.3
  • 27
    • 0346120025 scopus 로고    scopus 로고
    • Detection of new transposable element families in Drosophila melanogaster and Anopheles gambiae genomes
    • Quesneville, H., Nouaud, D., Anxolabehere, D., 2003. Detection of new transposable element families in Drosophila melanogaster and Anopheles gambiae genomes. J. Mol. Evol. 57, S50-S59.
    • (2003) J. Mol. Evol. , vol.57
    • Quesneville, H.1    Nouaud, D.2    Anxolabehere, D.3
  • 31
    • 0034065724 scopus 로고    scopus 로고
    • Ab initio gene finding in Drosophila genomic DNA
    • Salamov, A.A., Solovyev, V.V., 2000. Ab initio gene finding in Drosophila genomic DNA. Genome Res. 10, 516-522.
    • (2000) Genome Res. , vol.10 , pp. 516-522
    • Salamov, A.A.1    Solovyev, V.V.2
  • 33
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., Gibson, T.J., 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 35
    • 0035923510 scopus 로고    scopus 로고
    • Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes
    • USA
    • Witte, C.P., Le, Q.H., Bureau, T., Kumar, A., 2001. Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes. Proc. Natl. Acad. Sci. USA 98, 13778-13783.
    • (2001) Proc. Natl. Acad. Sci. , vol.98 , pp. 13778-13783
    • Witte, C.P.1    Le, Q.H.2    Bureau, T.3    Kumar, A.4
  • 37


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.