-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller.W., Myers, E.W. and Lipman.D.J. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0041002787
-
Efficient text searching of regular expressions
-
Baeza-Yates, R.A. and Gonnet, G.H. (1989) Efficient text searching of regular expressions. Proc. ICALP, 16, 46-62.
-
(1989)
Proc. ICALP
, vol.16
, pp. 46-62
-
-
Baeza-Yates, R.A.1
Gonnet, G.H.2
-
3
-
-
0029916911
-
The swiss-prot protein sequence data bank and its new supplement trembl
-
Bairoch, A. and Apweiler.R. (1996) The swiss-prot protein sequence data bank and its new supplement trembl. Nucleic Acids Res., 24, 21—25.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 21-25
-
-
Bairoch, A.1
Apweiler, R.2
-
4
-
-
0026808763
-
Mapping the whole human genome by fingerprinting yeast artificial chromosomes
-
Bellanne-Chantelot, C. et al. (1992) Mapping the whole human genome by fingerprinting yeast artificial chromosomes. Cell, 70, 1059-1068.
-
(1992)
Cell
, vol.70
, pp. 1059-1068
-
-
Bellanne-Chantelot, C.1
-
5
-
-
0017547820
-
A fast string searching algorithm
-
Boyer.R. and Moore, S. (1977) A fast string searching algorithm. Communications of the ACM, 20, 762-772.
-
(1977)
Communications of the ACM
, vol.20
, pp. 762-772
-
-
Boyer, R.1
Moore, S.2
-
6
-
-
21844501850
-
Parallelism in lassap, a large scale sequence comparisons package
-
Proceedings of HPCN95 Conference, Milan. Springer, Berlin
-
Codani, J.J. and Glemet, E. (1995) Parallelism in lassap, a large scale sequence comparisons package. In Lecture Notes in Computer Science. Springer Verlag, Vol. 919, pp. 787-792. Proceedings of HPCN95 Conference, Milan. Springer, Berlin.
-
(1995)
In Lecture Notes in Computer Science. Springer Verlag
, vol.919
, pp. 787-792
-
-
Codani, J.J.1
Glemet, E.2
-
7
-
-
33749719955
-
Analysis of significance of Smith and Waterman Z-score
-
submitted
-
Comet, J.P., Aude, J.C, Glemet.E., Risler.J.L., Henaut, A. and CodaniJ.J. (1997) Analysis of significance of Smith and Waterman Z-score J. Comp. Biol., submitted.
-
(1997)
J. Comp. Biol.
-
-
Comet, J.P.1
Aude, J.C.2
Glemet, E.3
Risler, J.L.4
Henaut, A.5
Codanij, J.6
-
8
-
-
0011239708
-
-
Petah-Tikva, Israel
-
Compugen Ltd (1996) BIOCCELERATOR Manual. Petah-Tikva, Israel
-
(1996)
BIOCCELERATOR Manual
-
-
-
9
-
-
0025909714
-
A platform for biological sequence comparison on parallel computers
-
Deshpande, A.S., Richards, D.S. and Pearson, W.R. (1991) A platform for biological sequence comparison on parallel computers. Comput. Applic. Biosci., 7, 237-247.
-
(1991)
Comput. Applic. Biosci.
, vol.7
, pp. 237-247
-
-
Deshpande, A.S.1
Richards, D.S.2
Pearson, W.R.3
-
10
-
-
0027457706
-
Srs—an indexing and retrieval tool for flat file data libraries
-
Etzold, T. and Argos, P. (1993) Srs—an indexing and retrieval tool for flat file data libraries. Comput. Applic. Biosci., 9, 49—57.
-
(1993)
Comput. Applic. Biosci.
, vol.9
, pp. 49-57
-
-
Etzold, T.1
Argos, P.2
-
12
-
-
0022118360
-
Acnuc—a portable retrieval system for nucleic acid sequence databases: Logical and physical designs and usage
-
Gouy, M., Gautier, C, Attimonelli, M., Lanave, C. and DiPaola, G. (1985) Acnuc—a portable retrieval system for nucleic acid sequence databases: logical and physical designs and usage. Comput. Applic. Biosci., 1, 167— 172.
-
(1985)
Comput. Applic. Biosci.
, vol.1
, pp. 167-172
-
-
Gouy, M.1
Gautier, C.2
Attimonelli, M.3
Lanave, C.4
Dipaola, G.5
-
13
-
-
0025341905
-
Profile analysis
-
Gribskov, M., Luthy, R. and Eisenberg.D. (1990) Profile analysis. Methods Enzymol., 183, 146-159.
-
(1990)
Methods Enzymol
, vol.183
, pp. 146-159
-
-
Gribskov, M.1
Luthy, R.2
Eisenberg, D.3
-
14
-
-
0017492836
-
A fast algorithm for computing longest common subsequences
-
Hunt, J. and Szymanski, T.G. (1977) A fast algorithm for computing longest common subsequences. Theor. Comput. Sci., 20, 350-353.
-
(1977)
Theor. Comput. Sci.
, vol.20
, pp. 350-353
-
-
Hunt, J.1
Szymanski, T.G.2
-
15
-
-
0028941606
-
Implementations of blast for parallel computers
-
Julich.A. (1995) Implementations of blast for parallel computers. Comput. Applic. Biosci., 11, 3-6.
-
(1995)
Comput. Applic. Biosci.
, vol.11
, pp. 3-6
-
-
Julich, A.1
-
17
-
-
38249042384
-
Efficient string matching with k mismatches
-
Landau.G.M. and Vishkin, U. (1986) Efficient string matching with k mismatches. Theor. Comput. Sci., 43, 239-249.
-
(1986)
Theor. Comput. Sci.
, vol.43
, pp. 239-249
-
-
Landau, G.M.1
Vishkin, U.2
-
18
-
-
0025977511
-
Parallel computation and FASTA: Confronting the problem of parallel database search for a fast sequence comparison algorithm
-
Miller.P.L., Nadkarni.P.M. and Carriero.N.M. (1991) Parallel computation and FASTA: confronting the problem of parallel database search for a fast sequence comparison algorithm. Comput. Applic. Biosci., 7, 71-78.
-
(1991)
Comput. Applic. Biosci.
, vol.7
, pp. 71-78
-
-
Miller, P.L.1
Nadkarni, P.M.2
Carriero, N.M.3
-
19
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
Needleman, S.B. and Wunsch, C.D. (1970) A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mot. Biol., 48, 443-453.
-
(1970)
J. Mot. Biol.
, vol.48
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
20
-
-
0023989064
-
Improve tools for biological sequence comparison
-
Pearson, W.R. and Lipman.D.J. (1988) Improve tools for biological sequence comparison. Proc. Natl Acad. Sci. USA, 85, 2444-2448.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
21
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith.T.F. and Waterman.M.S. (1981) Identification of common molecular subsequences./ Mol. Biol., 147, 195-197.
-
(1981)
Mol. Biol.
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
22
-
-
0028218683
-
Modular arrangement of proteins as inferred from analysis of homology
-
Sonnhammer, E.L.L. and Kahn.D. (1994) Modular arrangement of proteins as inferred from analysis of homology. Protein Sci., 3, 482—492.
-
(1994)
Protein Sci
, vol.3
, pp. 482-492
-
-
Sonnhammer, E.L.L.1
Kahn, D.2
-
23
-
-
0028129799
-
A simple tool to search for sequence motifs that are conserved in blast outputs
-
Tatusov.R.L. and Koonin, E.V. (1994) A simple tool to search for sequence motifs that are conserved in blast outputs. Comput. Applic. Biosci., 10, 457-459.
-
(1994)
Comput. Applic. Biosci.
, vol.10
, pp. 457-459
-
-
Tatusov, R.L.1
Koonin, E.V.2
-
24
-
-
0030935244
-
Using video oriented instructions to speed-up sequence comparison
-
Wozniak, A. (1997) Using video oriented instructions to speed-up sequence comparison. Comput. Applic. Biosci., 13, 145-150.
-
(1997)
Comput. Applic. Biosci.
, vol.13
, pp. 145-150
-
-
Wozniak, A.1
-
25
-
-
85071208724
-
Fast text Searching whith Errors. Technical Report TR 91-11
-
Wu, S. and Manber, U. (1991) Fast text Searching whith Errors. Technical Report TR 91-11, University of Arizona.
-
(1991)
University of Arizona
-
-
Wu, S.1
Manber, U.2
|