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Volumn 250, Issue 1, 2005, Pages 33-38

Activity, diversity and population size of ammonia-oxidising bacteria in oil-contaminated landfarming soil

Author keywords

Genetic diversity; Nitrosospira sp.; Real time PCR; Soil contamination

Indexed keywords

AMMONIA; RIBOSOME RNA;

EID: 23744467020     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2005.06.057     Document Type: Article
Times cited : (222)

References (31)
  • 2
    • 0027338087 scopus 로고
    • Bioremediation of soil contaminated with polynuclear aromatic hydrocarbons (PAHs): A review
    • S.C. Wilson, and K.C. Jones Bioremediation of soil contaminated with polynuclear aromatic hydrocarbons (PAHs): a review Environmental Pollution 81 1993 229 249
    • (1993) Environmental Pollution , vol.81 , pp. 229-249
    • Wilson, S.C.1    Jones, K.C.2
  • 3
    • 0031194647 scopus 로고    scopus 로고
    • Enhancement and inhibition of microbial activity in hydrocarbon- contaminated arctic soil: Implications for nutrient-amended bioremediation
    • J.F. Braddock, M. Ruth, P.H. Catterhall, J.L. Walworth, and K.A. Mccarthy Enhancement and inhibition of microbial activity in hydrocarbon-contaminated arctic soil: implications for nutrient-amended bioremediation Environmental Science and Technology 31 1997 2078 2084
    • (1997) Environmental Science and Technology , vol.31 , pp. 2078-2084
    • Braddock, J.F.1    Ruth, M.2    Catterhall, P.H.3    Walworth, J.L.4    McCarthy, K.A.5
  • 4
    • 0032824379 scopus 로고    scopus 로고
    • Nitrification and autotrophic nitrifying bacteria in a hydrocarbon-polluted soil
    • J. Deni, and M.J. Penninckx Nitrification and autotrophic nitrifying bacteria in a hydrocarbon-polluted soil Applied and Environmental Microbiology 65 9 1999 4008 4013
    • (1999) Applied and Environmental Microbiology , vol.65 , Issue.9 , pp. 4008-4013
    • Deni, J.1    Penninckx, M.J.2
  • 5
    • 0036427445 scopus 로고    scopus 로고
    • Cultivation-based and molecular approaches to characterisation of terrestrial and aquatic nitrifiers
    • J.I. Prosser, and T.M. Embley Cultivation-based and molecular approaches to characterisation of terrestrial and aquatic nitrifiers Antonie van Leeuwenhoek 81 2002 165 179
    • (2002) Antonie Van Leeuwenhoek , vol.81 , pp. 165-179
    • Prosser, J.I.1    Embley, T.M.2
  • 7
    • 0345004957 scopus 로고    scopus 로고
    • RFLP of rRNA genes and sequencing of the 16S-23S rDNA intergenic spacer region of ammonia-oxidising bacteria: A phylogenetic approach
    • Å. Aakra, J.B. Utåker, and I.F. Nes RFLP of rRNA genes and sequencing of the 16S-23S rDNA intergenic spacer region of ammonia-oxidising bacteria: a phylogenetic approach International Journal of Systematic Bacteriology 49 1999 123 130
    • (1999) International Journal of Systematic Bacteriology , vol.49 , pp. 123-130
    • Aakra, Å.1    Utåker, J.B.2    Nes, I.F.3
  • 8
    • 0034466757 scopus 로고    scopus 로고
    • Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: Implications for molecular diversity surveys
    • U. Purkhold, A. Pommerening-Röser, S. Juretschko, M.C. Schmid, H.-P. Koops, and M. Wagner Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys Applied and Environmental Microbiology 66 12 2000 5368 5382
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.12 , pp. 5368-5382
    • Purkhold, U.1    Pommerening-Röser, A.2    Juretschko, S.3    Schmid, M.C.4    Koops, H.-P.5    Wagner, M.6
  • 9
    • 0029805297 scopus 로고    scopus 로고
    • Molecular Diversity of Soil and Marine 16S rRNA gene sequences related to β-subgroup ammonia-oxidising bacteria
    • J.R. Stephen, A.E. McCaig, Z. Smith, J.I. Prosser, and T.M. Embley Molecular Diversity of Soil and Marine 16S rRNA gene sequences related to β-subgroup ammonia-oxidising bacteria Applied and Environmental Microbiology 62 11 1996 4147 4154
    • (1996) Applied and Environmental Microbiology , vol.62 , Issue.11 , pp. 4147-4154
    • Stephen, J.R.1    McCaig, A.E.2    Smith, Z.3    Prosser, J.I.4    Embley, T.M.5
  • 10
    • 0032874459 scopus 로고    scopus 로고
    • Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia oxidizing populations of the β-subdivision of the class Proteobacteria in arable soils to nitrogen fertilizer
    • T.A. Mendum, R.E. Sockett, and P.R. Hirsch Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia oxidizing populations of the β-subdivision of the class Proteobacteria in arable soils to nitrogen fertilizer Applied and Environmental Microbiology 65 9 1999 4155 4162
    • (1999) Applied and Environmental Microbiology , vol.65 , Issue.9 , pp. 4155-4162
    • Mendum, T.A.1    Sockett, R.E.2    Hirsch, P.R.3
  • 11
    • 0033015223 scopus 로고    scopus 로고
    • Comparative diversity of ammonia oxidizer 16S rRNA gene sequences in native, tilled and success ional soils
    • M.A. Bruns, J.R. Stephen, G.A. Kowalchuk, J.I. Prosser, and E.A. Paul Comparative diversity of ammonia oxidizer 16S rRNA gene sequences in native, tilled and success ional soils Applied and Environmental Microbiology 65 7 1999 2994 3000
    • (1999) Applied and Environmental Microbiology , vol.65 , Issue.7 , pp. 2994-3000
    • Bruns, M.A.1    Stephen, J.R.2    Kowalchuk, G.A.3    Prosser, J.I.4    Paul, E.A.5
  • 13
    • 0034548634 scopus 로고    scopus 로고
    • Changes in the community structure of ammonia-oxidising bacteria during secondary succession of calcareous grasslands
    • G.A. Kowalchuk, A.W. Stienstra, G.H.J. Heilig, J.R. Stephen, and Woldendorp Changes in the community structure of ammonia-oxidising bacteria during secondary succession of calcareous grasslands Environmental Microbiology 2 1 2000 99 110
    • (2000) Environmental Microbiology , vol.2 , Issue.1 , pp. 99-110
    • Kowalchuk, G.A.1    Stienstra, A.W.2    Heilig, G.H.J.3    Stephen, J.R.4    Woldendorp5
  • 14
    • 0036135250 scopus 로고    scopus 로고
    • Grassland management regime reduces small-scale heterogeneity and species diversity of β-Proteobacteria ammonia-oxidizer populations
    • G. Webster, T.M Embley, and J.I. Prosser Grassland management regime reduces small-scale heterogeneity and species diversity of β-Proteobacteria ammonia-oxidizer populations Applied and Environmental Microbiology 68 1 2002 20 30
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.1 , pp. 20-30
    • Webster, G.1    Embley, T.M.2    Prosser, J.I.3
  • 16
    • 0036305159 scopus 로고    scopus 로고
    • Nitrosomonas europea-like bacteria detected as the dominant β-subclass Proteobacteria ammonia oxidisers in reference and limed acid forest soils
    • M. Carnol, G.A. Kowalchuk, and W. De Boer Nitrosomonas europea-like bacteria detected as the dominant β-subclass Proteobacteria ammonia oxidisers in reference and limed acid forest soils Soil Biology & Biochemistry 34 2002 1047 1050
    • (2002) Soil Biology & Biochemistry , vol.34 , pp. 1047-1050
    • Carnol, M.1    Kowalchuk, G.A.2    De Boer, W.3
  • 17
    • 0141786957 scopus 로고    scopus 로고
    • Liming induces growth of a diverse flora of ammonia-oxidising bacteria in a acid spruce forest soil determined by SSCP and DGGE
    • J.S.K. Bäckman, A. Hermansson, C.C. Tebbe, and P.-E. Lindgren Liming induces growth of a diverse flora of ammonia-oxidising bacteria in a acid spruce forest soil determined by SSCP and DGGE Soil Biology & Biochemistry 35 2003 1337 1347
    • (2003) Soil Biology & Biochemistry , vol.35 , pp. 1337-1347
    • Bäckman, J.S.K.1    Hermansson, A.2    Tebbe, C.C.3    Lindgren, P.-E.4
  • 18
    • 0031100745 scopus 로고    scopus 로고
    • Nitrification and utilization of ammonium and nitrate during oil bioremediation at different soil water
    • Z.Z. Chang, and R.W. Weaver Nitrification and utilization of ammonium and nitrate during oil bioremediation at different soil water Journal of Soil Contamination 6 2 1997 149 160
    • (1997) Journal of Soil Contamination , vol.6 , Issue.2 , pp. 149-160
    • Chang, Z.Z.1    Weaver, R.W.2
  • 19
    • 0034325865 scopus 로고    scopus 로고
    • Isotopic model (NISOTOP) used to investigate N-15-urea transformations in the presence of phenanthrene, chrysene and bezo(a)pyrene in a soil-plant system
    • S. Cervelli, F. Di Giovanni, F. Perna, and D. Perret Isotopic model (NISOTOP) used to investigate N-15-urea transformations in the presence of phenanthrene, chrysene and bezo(a)pyrene in a soil-plant system Water Air and Soil Pollution 124 1-2 2000 125 139
    • (2000) Water Air and Soil Pollution , vol.124 , Issue.1-2 , pp. 125-139
    • Cervelli, S.1    Di Giovanni, F.2    Perna, F.3    Perret, D.4
  • 20
    • 0035992447 scopus 로고    scopus 로고
    • Soil microbial toxicity of eight polycyclic aromatic compounds: Effects on nitrification, the genetic diversity of bacteria, and the total number of protozoan
    • L.E. Sverdrup, F. Ekelund, P.H. Krough, T. Nielsen, and K. Johnsen Soil microbial toxicity of eight polycyclic aromatic compounds: Effects on nitrification, the genetic diversity of bacteria, and the total number of protozoan Environmental Toxicology and Chemistry 21 8 2002 1644 1650
    • (2002) Environmental Toxicology and Chemistry , vol.21 , Issue.8 , pp. 1644-1650
    • Sverdrup, L.E.1    Ekelund, F.2    Krough, P.H.3    Nielsen, T.4    Johnsen, K.5
  • 21
    • 22044447349 scopus 로고    scopus 로고
    • Application of cation-exchange membranes for characterisation and imaging ammonia-oxidising bacteria in soils
    • J. Kurola, C. Wittmann, M. Salkinoja-Salonen, T. Aarnio, and M. Romantschuk Application of cation-exchange membranes for characterisation and imaging ammonia-oxidising bacteria in soils FEMS Microbiology Ecology 53 2005 463 472
    • (2005) FEMS Microbiology Ecology , vol.53 , pp. 463-472
    • Kurola, J.1    Wittmann, C.2    Salkinoja-Salonen, M.3    Aarnio, T.4    Romantschuk, M.5
  • 22
    • 33645208869 scopus 로고    scopus 로고
    • Potential nitrification test
    • F. Schinner R. Öhlinger E., Kandeler R. Margesin Springer Berlin, Heidelberg
    • E. Kandeler Potential nitrification test F. Schinner R. Öhlinger E., Kandeler R. Margesin Methods in Soil Biology 2002 Springer Berlin, Heidelberg 146 148
    • (2002) Methods in Soil Biology , pp. 146-148
    • Kandeler, E.1
  • 23
    • 0035144174 scopus 로고    scopus 로고
    • Quantification of ammonia-oxidising bacteria in arable soil by Real-time PCR
    • A. Hermansson, and P.-E. Lindgren Quantification of ammonia-oxidising bacteria in arable soil by Real-time PCR Applied and Environmental Microbiology 67 2 2001 972 976
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.2 , pp. 972-976
    • Hermansson, A.1    Lindgren, P.-E.2
  • 24
    • 0028240270 scopus 로고
    • Molecular analysis of enrichment cultures of marine ammonia oxidisers
    • A.E. McCaig, T.M. Embley, and J.I. Prosser Molecular analysis of enrichment cultures of marine ammonia oxidisers FEMS Microbiology Letters 120 1994 363 368
    • (1994) FEMS Microbiology Letters , vol.120 , pp. 363-368
    • McCaig, A.E.1    Embley, T.M.2    Prosser, J.I.3
  • 25
    • 0030901922 scopus 로고    scopus 로고
    • Analysis of ammonia-oxidising bacteria of β-subdivision of the class Proteobacteria in costal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified ribosomal DNA fragments
    • G.A. Kowalchuk, J.R. Stephen, W. De Boer, J.I. Prosser, T.M. Embley, and Woldendorp Analysis of ammonia-oxidising bacteria of β-subdivision of the class Proteobacteria in costal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified ribosomal DNA fragments Applied and Environmental Microbiology 63 9 1997 1489 1497
    • (1997) Applied and Environmental Microbiology , vol.63 , Issue.9 , pp. 1489-1497
    • Kowalchuk, G.A.1    Stephen, J.R.2    De Boer, W.3    Prosser, J.I.4    Embley, T.M.5    Woldendorp6
  • 26
    • 0036794643 scopus 로고    scopus 로고
    • Changes in the population structure of β-group autotrophic ammonia oxidizing bacteria in arable soils in response to agricultural practice
    • T.A. Mendum, and P.R. Hirsch Changes in the population structure of β-group autotrophic ammonia oxidizing bacteria in arable soils in response to agricultural practice Soil Biology & Biochemistry 34 2002 1479 1485
    • (2002) Soil Biology & Biochemistry , vol.34 , pp. 1479-1485
    • Mendum, T.A.1    Hirsch, P.R.2
  • 27
    • 0034009793 scopus 로고    scopus 로고
    • Molecular analysis of ammonia-oxidising bacteria in soil of successional grasslands of the Drentsche a (The Netherlands)
    • G.A. Kowalchuk, A.W. Stienstra, G.H.J. Heilig, J.R. Stephen, and Woldendorp Molecular analysis of ammonia-oxidising bacteria in soil of successional grasslands of the Drentsche A (The Netherlands) FEMS Microbiology Ecology 31 2000 207 215
    • (2000) FEMS Microbiology Ecology , vol.31 , pp. 207-215
    • Kowalchuk, G.A.1    Stienstra, A.W.2    Heilig, G.H.J.3    Stephen, J.R.4    Woldendorp5
  • 29
    • 0032878687 scopus 로고    scopus 로고
    • Comparison of Nitrosospirastrains isolated from terrestrial environments
    • Q.Q. Jiang, and L.R. Bakken Comparison of Nitrosospirastrains isolated from terrestrial environments FEMS Microbiology Ecology 30 1999 171 186
    • (1999) FEMS Microbiology Ecology , vol.30 , pp. 171-186
    • Jiang, Q.Q.1    Bakken, L.R.2
  • 30
    • 5744246431 scopus 로고    scopus 로고
    • Quantification of ammonia-oxidising bacteria in limed and non-limed acid coniferous soil using real-time PCR
    • A. Hermanssson, J.S.K. Bäckman, B.H. Svensson, and P.-E. Lindgren Quantification of ammonia-oxidising bacteria in limed and non-limed acid coniferous soil using real-time PCR Soil Biology & Biochemistry 36 2004 1935 1941
    • (2004) Soil Biology & Biochemistry , vol.36 , pp. 1935-1941
    • Hermanssson, A.1    Bäckman, J.S.K.2    Svensson, B.H.3    Lindgren, P.-E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.