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Volumn 32, Issue 3, 2004, Pages 1232-1241

ETR-3 and CELF4 protein domains required for RNA binding and splicing activity in vivo

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; CELF4 PROTEIN; DNA; ETR3 PROTEIN; RNA; RNA BINDING PROTEIN; TROPONIN T; UNCLASSIFIED DRUG; CELF4 RNA BINDING PROTEIN, HUMAN; CUGBP2 PROTEIN, HUMAN; NERVE PROTEIN;

EID: 2342428552     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh275     Document Type: Article
Times cited : (38)

References (33)
  • 2
    • 0035252410 scopus 로고    scopus 로고
    • Alternative splicing: Increasing diversity in the proteomic world
    • Graveley,B.R. (2001) Alternative splicing: increasing diversity in the proteomic world. Trends Genet., 17, 100-107.
    • (2001) Trends Genet. , vol.17 , pp. 100-107
    • Graveley, B.R.1
  • 3
    • 0036337915 scopus 로고    scopus 로고
    • A genomic view of alternative splicing
    • Modrek,B. and Lee,C. (2002) A genomic view of alternative splicing. Nature Genet., 30, 13-19.
    • (2002) Nature Genet. , vol.30 , pp. 13-19
    • Modrek, B.1    Lee, C.2
  • 4
    • 0346908613 scopus 로고    scopus 로고
    • Mechanisms of alternative pre-messenger RNA splicing
    • Black,D.L. (2003) Mechanisms of alternative pre-messenger RNA splicing. Annu. Rev. Biochem., 27, 27-48.
    • (2003) Annu. Rev. Biochem. , vol.27 , pp. 27-48
    • Black, D.L.1
  • 5
    • 0031857406 scopus 로고    scopus 로고
    • Muscle-specific splicing of a heterologous exon mediated by a single muscle-specific splicing enhancer from the cardiac troponin T gene
    • Cooper,T.A. (1998) Muscle-specific splicing of a heterologous exon mediated by a single muscle-specific splicing enhancer from the cardiac troponin T gene. Mol. Cell. Biol., 18, 4519-4525.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 4519-4525
    • Cooper, T.A.1
  • 6
    • 0030832044 scopus 로고    scopus 로고
    • A complex intronic splicing enhancer from the c-src pre-mRNA activates inclusion of a heterologous exon
    • Modafferi,E.F. and Black,D.L. (1997) A complex intronic splicing enhancer from the c-src pre-mRNA activates inclusion of a heterologous exon. Mol. Cell. Biol., 17, 6537-6545.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 6537-6545
    • Modafferi, E.F.1    Black, D.L.2
  • 7
    • 0035146628 scopus 로고    scopus 로고
    • The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing
    • Ladd,A.N., Charlet-B.,N. and Cooper,T.A. (2001) The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing. Mol. Cell. Biol., 21, 1285-1296.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 1285-1296
    • Ladd, A.N.1    Charlet-B., N.2    Cooper, T.A.3
  • 8
    • 0034666143 scopus 로고    scopus 로고
    • A family of human RNA-binding proteins related to the Drosophila Bruno translational regulator
    • Good,P.J., Chen,Q., Warner,S.J. and Herring,D.C. (2000) A family of human RNA-binding proteins related to the Drosophila Bruno translational regulator. J. Biol. Chem., 275, 28583-28592.
    • (2000) J. Biol. Chem. , vol.275 , pp. 28583-28592
    • Good, P.J.1    Chen, Q.2    Warner, S.J.3    Herring, D.C.4
  • 9
    • 0036247201 scopus 로고    scopus 로고
    • Region-specific alternative splicing in the nervous system: Implications for regulation by the RNA-binding protein NAPOR
    • Zhang,W., Liu,H., Han,K. and Grabowski,P.J. (2002) Region-specific alternative splicing in the nervous system: implications for regulation by the RNA-binding protein NAPOR. RNA, 8, 671-685.
    • (2002) RNA , vol.8 , pp. 671-685
    • Zhang, W.1    Liu, H.2    Han, K.3    Grabowski, P.J.4
  • 10
    • 0032906538 scopus 로고    scopus 로고
    • Cardiac elav-type RNA-binding protein (ETR-3) binds to RNA CUG repeats expanded in myotonic dystrophy
    • Lu,X., Timchenko,N.A. and Timchenko,L.T. (1999) Cardiac elav-type RNA-binding protein (ETR-3) binds to RNA CUG repeats expanded in myotonic dystrophy. Hum. Mol. Genet., 8, 53-60.
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 53-60
    • Lu, X.1    Timchenko, N.A.2    Timchenko, L.T.3
  • 11
    • 0035874939 scopus 로고    scopus 로고
    • Genomic organization and isoform-specific tissue expression of human NAPOR (CUG-BP2) as a candidate gene for familial arrhythmogenic right ventricular dysplasia
    • Li,D., Bachinski,L.L. and Roberts,R. (2001) Genomic organization and isoform-specific tissue expression of human NAPOR (CUG-BP2) as a candidate gene for familial arrhythmogenic right ventricular dysplasia. Genomics, 74, 396-401.
    • (2001) Genomics , vol.74 , pp. 396-401
    • Li, D.1    Bachinski, L.L.2    Roberts, R.3
  • 12
    • 0036203307 scopus 로고    scopus 로고
    • Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing
    • Charlet-B.,N., Logan,P., Singh,G. and Cooper,T.A. (2002) Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing. Mol. Cell, 9, 649-658.
    • (2002) Mol. Cell , vol.9 , pp. 649-658
    • Charlet-B., N.1    Logan, P.2    Singh, G.3    Cooper, T.A.4
  • 13
    • 0036347927 scopus 로고    scopus 로고
    • Loss of the muscle-specific chloride channel in type 1 myotonic dystrophy due to misregulated alternative splicing
    • Charlet-B.,N., Savkur,R.S., Singh,G., Philips,A.V., Grice,E.A. and Cooper,T.A. (2002) Loss of the muscle-specific chloride channel in type 1 myotonic dystrophy due to misregulated alternative splicing. Mol. Cell, 10, 45-53.
    • (2002) Mol. Cell , vol.10 , pp. 45-53
    • Charlet-B., N.1    Savkur, R.S.2    Singh, G.3    Philips, A.V.4    Grice, E.A.5    Cooper, T.A.6
  • 14
    • 0034873099 scopus 로고    scopus 로고
    • Aberrant regulation of insulin receptor alternative splicing is associated with insulin resistance in myotonic dystrophy
    • Savkur,R.S., Philips,A.V. and Cooper,T.A. (2001) Aberrant regulation of insulin receptor alternative splicing is associated with insulin resistance in myotonic dystrophy. Nature Genet., 29, 40-47.
    • (2001) Nature Genet. , vol.29 , pp. 40-47
    • Savkur, R.S.1    Philips, A.V.2    Cooper, T.A.3
  • 15
    • 0032076126 scopus 로고    scopus 로고
    • Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy
    • Philips,A.V., Timchenko,L.T. and Cooper,T.A. (1998) Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy. Science, 280, 737-741.
    • (1998) Science , vol.280 , pp. 737-741
    • Philips, A.V.1    Timchenko, L.T.2    Cooper, T.A.3
  • 16
    • 0036193474 scopus 로고    scopus 로고
    • Regulation of alternative splicing of alpha-actinin transcript by Bruno-like proteins
    • Suzuki,H., Jin,Y., Otani,H., Yasuda,K. and Inoue,K. (2002) Regulation of alternative splicing of alpha-actinin transcript by Bruno-like proteins. Genes Cells, 7, 133-141.
    • (2002) Genes Cells , vol.7 , pp. 133-141
    • Suzuki, H.1    Jin, Y.2    Otani, H.3    Yasuda, K.4    Inoue, K.5
  • 17
    • 0037377379 scopus 로고    scopus 로고
    • Antagonistic regulation of alpha-actinin alternative splicing by CELF proteins and polypyrimidine tract binding protein
    • Gromak,N., Matlin,A.J., Cooper,T.A. and Smith,C.W. (2003) Antagonistic regulation of alpha-actinin alternative splicing by CELF proteins and polypyrimidine tract binding protein. RNA, 9, 443-456.
    • (2003) RNA , vol.9 , pp. 443-456
    • Gromak, N.1    Matlin, A.J.2    Cooper, T.A.3    Smith, C.W.4
  • 18
    • 0042701918 scopus 로고    scopus 로고
    • Two neuronal, nuclear-localized RNA binding proteins involved in synaptic transmission
    • Loria,P.M., Duke,A., Rand,J.B. and Hobert,O. (2003) Two neuronal, nuclear-localized RNA binding proteins involved in synaptic transmission. Curr. Biol., 13, 1317-1323.
    • (2003) Curr. Biol. , vol.13 , pp. 1317-1323
    • Loria, P.M.1    Duke, A.2    Rand, J.B.3    Hobert, O.4
  • 19
    • 0022235739 scopus 로고
    • A single cardiac troponin T gene generates embryonic and adult isoforms via developmentally regulated alternate splicing
    • Cooper,T.A. and Ordahl,C.P. (1985) A single cardiac troponin T gene generates embryonic and adult isoforms via developmentally regulated alternate splicing. J. Biol. Chem., 260, 11140-11148.
    • (1985) J. Biol. Chem. , vol.260 , pp. 11140-11148
    • Cooper, T.A.1    Ordahl, C.P.2
  • 21
    • 0006388051 scopus 로고
    • Delineation of the cardiac troponin T expression pattern during murine development
    • McAuliffe,J.J. (1994) Delineation of the cardiac troponin T expression pattern during murine development. J. Cell. Biochem., 18D (Suppl), W347.
    • (1994) J. Cell. Biochem. , vol.18 D , Issue.SUPPL.
    • McAuliffe, J.J.1
  • 22
    • 0025119312 scopus 로고
    • Cardiac troponin T in developing, regenerating and denervated rat skeletal muscle
    • Saggin,L., Gorza,L., Ausoni,S. and Schiaffino,S. (1990) Cardiac troponin T in developing, regenerating and denervated rat skeletal muscle. Development, 110, 547-554.
    • (1990) Development , vol.110 , pp. 547-554
    • Saggin, L.1    Gorza, L.2    Ausoni, S.3    Schiaffino, S.4
  • 23
    • 0028302366 scopus 로고
    • Human cardiac troponin T: Identification of fetal isoforms and assignment of the TNNT2 locus to chromosome 1q
    • Townsend,P.J., Farza,H., Macgeoch,C., Spurr,N.K., Wade,R., Gahlmann,R., Yacoub,M.H. and Barton,P.J.R. (1994) Human cardiac troponin T: Identification of fetal isoforms and assignment of the TNNT2 locus to chromosome 1q. Genomics, 21, 311-316.
    • (1994) Genomics , vol.21 , pp. 311-316
    • Townsend, P.J.1    Farza, H.2    Macgeoch, C.3    Spurr, N.K.4    Wade, R.5    Gahlmann, R.6    Yacoub, M.H.7    Barton, P.J.R.8
  • 24
    • 0024385895 scopus 로고
    • Isolation and characterization of cDNA clones encoding embryonic and adult isoforms of rat cardiac troponin T
    • Jin,J.P. and Lin,J.J. (1989) Isolation and characterization of cDNA clones encoding embryonic and adult isoforms of rat cardiac troponin T. J. Biol. Chem., 264, 14471-14477.
    • (1989) J. Biol. Chem. , vol.264 , pp. 14471-14477
    • Jin, J.P.1    Lin, J.J.2
  • 25
    • 0030010743 scopus 로고    scopus 로고
    • Muscle-specific splicing enhancers regulate inclusion of the cardiac troponin T alternative exon in embryonic skeletal muscle
    • Ryan,K.J. and Cooper,T.A. (1996) Muscle-specific splicing enhancers regulate inclusion of the cardiac troponin T alternative exon in embryonic skeletal muscle. Mol. Cell. Biol., 16, 4014-4023.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 4014-4023
    • Ryan, K.J.1    Cooper, T.A.2
  • 26
    • 0028129989 scopus 로고
    • Conserved structures and diversity of functions of RNA-binding proteins
    • Burd,C.G. and Dreyfuss,G. (1994) Conserved structures and diversity of functions of RNA-binding proteins. Science, 265, 615-621.
    • (1994) Science , vol.265 , pp. 615-621
    • Burd, C.G.1    Dreyfuss, G.2
  • 28
    • 0033570899 scopus 로고    scopus 로고
    • CUG repeat binding protein (CUGBP1) interacts with the 5′ region of C/EBPbeta mRNA and regulates translation of C/EBPbeta isoforms
    • Timchenko,N.A., Welm,A.L., Lu,X. and Timchenko,L.T. (1999) CUG repeat binding protein (CUGBP1) interacts with the 5′ region of C/EBPbeta mRNA and regulates translation of C/EBPbeta isoforms. Nucleic Acids Res., 27, 4517-4525.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4517-4525
    • Timchenko, N.A.1    Welm, A.L.2    Lu, X.3    Timchenko, L.T.4
  • 29
    • 0034191964 scopus 로고    scopus 로고
    • Vegetal localization of the maternal mRNA encoding an EDEN-BP/Bruno-like protein in zebrafish
    • Suzuki,H., Maegawa,S., Nishibu,T., Sugiyama,T., Yasuda,K. and Inoue,K. (2000) Vegetal localization of the maternal mRNA encoding an EDEN-BP/Bruno-like protein in zebrafish. Mech. Dev., 93, 205-209.
    • (2000) Mech. Dev. , vol.93 , pp. 205-209
    • Suzuki, H.1    Maegawa, S.2    Nishibu, T.3    Sugiyama, T.4    Yasuda, K.5    Inoue, K.6
  • 30
    • 0034703626 scopus 로고    scopus 로고
    • The CUG-binding protein binds specifically to UG dinucleotide repeats in a yeast three-hybrid system
    • Takahashi,N., Sasagawa,N., Suzuki,K. and Ishiura,S. (2000) The CUG-binding protein binds specifically to UG dinucleotide repeats in a yeast three-hybrid system. Biochem. Biophys. Res. Commun., 277, 518-523.
    • (2000) Biochem. Biophys. Res. Commun. , vol.277 , pp. 518-523
    • Takahashi, N.1    Sasagawa, N.2    Suzuki, K.3    Ishiura, S.4
  • 31
    • 0036850732 scopus 로고    scopus 로고
    • An analysis of the sequence requirements of EDEN-BP for specific RNA binding
    • Bonnet-Corven,S., Audic,Y., Omilli,F. and Osborne,H.B. (2002) An analysis of the sequence requirements of EDEN-BP for specific RNA binding. Nucleic Acids Res., 30, 4667-4674.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4667-4674
    • Bonnet-Corven, S.1    Audic, Y.2    Omilli, F.3    Osborne, H.B.4
  • 32
    • 0030662379 scopus 로고    scopus 로고
    • Altered phosphorylation and intracellular distribution of a (CUG)n triplet repeat RNA-binding protein in patients with myotonic dystrophy and in myotonin protein kinase knockout mice
    • Roberts,R., Timchenko,N.A., Miller,J.W., Reddy,S., Caskey,C.T., Swanson,M.S. and Timchenko,L.T. (1997) Altered phosphorylation and intracellular distribution of a (CUG)n triplet repeat RNA-binding protein in patients with myotonic dystrophy and in myotonin protein kinase knockout mice. Proc. Natl Acad. Sci. USA, 94, 13221-13226.
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 13221-13226
    • Roberts, R.1    Timchenko, N.A.2    Miller, J.W.3    Reddy, S.4    Caskey, C.T.5    Swanson, M.S.6    Timchenko, L.T.7
  • 33
    • 3042706995 scopus 로고    scopus 로고
    • CELF6, a member of the CELF6 family of RNA binding proteins, regulates MSE-dependent alternative splicng
    • In press
    • Ladd,A.N., Nguyen,H.N., Malhotra,K. and Cooper,T.A. (2003) CELF6, a member of the CELF6 family of RNA binding proteins, regulates MSE-dependent alternative splicng. J. Biol. Chem., in press.
    • (2003) J. Biol. Chem.
    • Ladd, A.N.1    Nguyen, H.N.2    Malhotra, K.3    Cooper, T.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.