Evolution of heterochromatic genes of Drosophila

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 31, 2005, Pages 10958-10963

  Yasuhara, Jiro C ^a   DeCrease, Christine H ^a   Wakimoto, Barbara T ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

Author keywords

Heterochromatin; Promoter; Transposable element

Indexed keywords

ARTICLE; DROSOPHILA; DROSOPHILA MELANOGASTER; EVOLUTION; GENE CLUSTER; GENE EXPRESSION; GENE MAPPING; GENE SILENCING; HETEROCHROMATIN; MOLECULAR INTERACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; TRANSCRIPTION INITIATION SITE; TRANSPOSON;

ANIMALS; BASE SEQUENCE; CHROMOSOME MAPPING; DNA TRANSPOSABLE ELEMENTS; DROSOPHILA; DROSOPHILA MELANOGASTER; EUCHROMATIN; EVOLUTION, MOLECULAR; GENES, INSECT; HETEROCHROMATIN; IN SITU HYBRIDIZATION, FLUORESCENCE; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PHYLOGENY; PROMOTER REGIONS (GENETICS); RNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

DROSOPHILA (GENUS); DROSOPHILA MELANOGASTER; DROSOPHILIDAE;

EID: 23344437775     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0503424102     Document Type: Article

References (37)

1. Weiler, K. S. & Wakimoto, B. T. (1995) Annu. Rev. Genet. 29, 577-605.
2. Volpe, T. A., Kidner, C., Hall, I. M., Teng, G., Grewal, S. I. & Martienssen, R. A. (2002) Science 297, 1833-1837.
3. Pal-Bhadra, M., Leibovitch, B. A., Gandhi, S. G., Rao, M., Bhadra, U., Birchler, J. A. & Elgin, S. C. (2004) Science 303, 669-672.
4. Verdel, A., Jia, S., Gerber, S., Sugiyama, T., Gygi, S., Grewal, S. I. & Moazed, D. (2004) Science 303, 672-676.
5. Hoskins, R. A., Smith, C. D., Carbon, J. W., Carvalho, A. B., Halpern, A., Kaminker, J. S., Kennedy, C., Mungall, C. J., Sullivan, B. A., Sutton, G. G., et al. (2002) Genome Biol. 3, RESEARCH0085.
6. Wakimoto, B. T. & Hearn, M. G. (1990) Genetics 125, 141-154.
7. Hearn, M. G., Hedrick, A., Grigliatti, T. A. & Wakimoto, B. T. (1991) Genetics 128, 785-797.
8. Dorer, D. R. & Henikoff, S. (1994) Cell 77, 993-1002.
9. Danilevskaya, O. N., Arkhipova, I. R., Traverse, K. L. & Pardue, M. L. (1997) Cell 88, 647-655.
10. Devlin, R. H., Bingham, B. & Wakimoto, B. T. (1990) Genetics 125, 129-140.
11. Howe, M., Dimitri, P., Berloco, M. & Wakimoto, B. T. (1995) Genetics 140, 1033-1045.
12. Devlin, R. H., Holm, D. G., Morin, K. R. & Honda, B. M. (1990) Genome 33, 405-415.
13. Powell, J. R. & DeSalle, R. (1995) in Evolutionary Biology, ed. Hecht, M. K. (Plenum, New York), Vol. 28, pp. 87-138.
14. Russo, C. A., Takezaki, N. & Nei, M. (1995) Mol. Biol. Evol. 12, 391-404.
15. Schaefer, B. C. (1995) Anal. Biochem. 227, 255-273.
16. Ohler, U., Liao, G. C., Niemann, H. & Rubin, G. M. (2002) Genome Biol. 3, RESEARCH0087.
17. England, T. E. & Uhlenbeck, O. C. (1978) Biochemistry 17, 2069-2076.
18. Romaniuk, E., McLaughlin, L. W., Neilson, T. & Romaniuk, P. J. (1982) Eur. J. Biochem. 125, 639-643.
19. Richards, S., Liu, Y., Bettencourt, B. R., Hradecky, P., Letovsky, S., Nielsen, R., Thornton, K., Hubisz, M. J., Chen, R., Meisel, R. P., et al. (2005) Genome Res. 15, 1-18.
20. Carvalho, A. B. (2002) Curr. Opin. Genet. Dev. 12, 664-668.
21. Lippman, Z., Gendrel, A. V., Black, M., Vaughn, M. W., Dedhia, N., McCombie, W. R., Lavine, K., Mittal, V., May, B., Kasschau, K. D., et al. (2004) Nature 430, 471-476.
22. Carvalho, A. B. & Clark, A. G. (2005) Science 307, 108-110.
23. Meunier, J. & Duret, L. (2004) Mol. Biol. Evol. 21, 984-990.
24. Singh, N. D., Arndt, P. F. & Petrov, D. A. (2005) Genetics 169, 709-722.
25. Ince, T. A. & Scotto, K. W. (1995) J. Biol. Chem. 270, 30249-30252.
26. Reynolds, G. A., Basu, S. K., Osborne, T. F., Chin, D. J., Gil, G., Brown, M. S., Goldstein, J. L. & Luskey, K. L. (1984) Cell 38, 275-285.
27. Struhl, K. (1989) Annu. Rev. Biochem. 58, 1051-1077.
28. Kollmar, R. & Farnham, P. J. (1993) Proc. Soc. Exp. Biol. Med. 203, 127-139.
29. Benoist, C. & Chambon, P. (1981) Nature 290, 304-310.
30. Smale, S. T. & Kadonaga, J. T. (2003) Annu. Rev. Biochem. 72, 449-479.
31. Dudov, K. P. & Perry, R. P. (1986) Proc. Natl. Acad. Sci. USA 83, 8545-8549.
32. Pardue, M. L. & DeBaryshe, P. G. (1999) Genetica 107, 189-196.
33. Miller, W. J., McDonald, J. F., Nouaud, D. & Anxolabehere, D. (1999) Genetica 107, 197-207.
34. Copenhaver, G. P., Nickel, K., Kuromori, T., Benito, M. L., Kaul, S., Lin, X., Bevan, M., Murphy, G., Harris, B., Parnell, L. D., et al. (1999) Science 286, 2468-2474.
35. Nagaki, K., Cheng, Z., Ouyang, S., Talbert, P. B., Kim, M., Jones, K. M., Henikoff, S., Buell, C. R. & Jiang, J. (2004) Nat. Genet. 36, 138-145.
36. She, X., Horvath, J. E., Jiang, Z., Liu, G., Furey, T. S., Christ, L., Clark, R., Graves, T., Gulden, C. L., Alkan, C., et al. (2004) Nature 430, 857-864.
37. Fong, T. C. & Emerson, B. M. (1992) Genes Dev. 6, 521-532.