A novel link between a Rab GTPase and Rvs proteins: The yeast amphiphysin homologues

Cell Biochemistry and Function

Volumn 23, Issue 4, 2005, Pages 253-266

  Talarek, Nicolas ^a   Balguerie, Axelle ^a   Aigle, Michel ^a   Durrens, Pascal ^a  

^a Institut de Biochimie et Genetique Cellulaires   (France)

Author keywords

Fus2p; GAP protein (Gyp5p, Ymr192p); Rvsp; Saccharomyces cerevisiae; Vesicular traffic

Indexed keywords

AMPHIPHYSIN; FUNGAL PROTEIN; GUANOSINE TRIPHOSPHATASE; GUANOSINE TRIPHOSPHATASE ACTIVATING PROTEIN; HYBRID PROTEIN; PROTEIN FUS2; PROTEIN GYP5P; PROTEIN RVS; PROTEIN YMR192; RAB PROTEIN; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; CELL BUDDING; CELL FUSION; CELL POLARITY; CYTOKINESIS; DIMERIZATION; DIPLOIDY; EPISTASIS; FLOW CYTOMETRY; GENE MUTATION; HAPLOIDY; MEIOSIS; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION; SPOROGENESIS; SRC HOMOLOGY DOMAIN; TWO HYBRID SYSTEM; YEAST;

AMINO ACID SEQUENCE; CYTOKINESIS; MOLECULAR SEQUENCE DATA; RAB GTP-BINDING PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; SRC HOMOLOGY DOMAINS; TWO-HYBRID SYSTEM TECHNIQUES;

MAMMALIA; SACCHAROMYCES CEREVISIAE;

EID: 22144460177     PISSN: 02636484     EISSN: None     Source Type: Journal    
DOI: 10.1002/cbf.1146     Document Type: Article

References (72)

1. Gotte M, Lazar T, Yoo JS, Scheglmann D, Gallwitz D. The full complement of yeast Ypt/Rab-GTPases and their involvement in exo- and endocytic trafficking. Subcell Biochem 2000; 34: 133-173.
2. Nakamura T, Hillova J, Mariage-Samson R, et al. A novel transcriptional unit of the tre oncogene widely expressed in human cancer cells. Oncogene 1992; 7: 733-741.
3. Schekman R. Genetic and biochemical analysis of vesicular traffic in yeast. Curr Opin Cell Biol 1992; 4: 587-592.
4. Bennett MK, Scheller RH. Molecular correlates of synaptic vesicle docking and fusion. Curr Opin Neurobiol 1994; 4: 324-329.
5. Ferro-Novick S, Jahn R. Vesicle fusion from yeast to man. Nature 1994; 370: 191-193.
6. Rothman JE, Wieland FT. Protein sorting by transport vesicles. Science 1996; 272: 227-234.
7. Drubin DG, Nelson WJ. Origins of cell polarity. Cell 1996; 84: 335-344.
8. Neiman AM. Prospore membrane formation defines a developmentally regulated branch of the secretory pathway in yeast. J Cell Biol 1998; 140: 29-37.
9. Munn AL. Molecular requirements for the internalisation step of endocytosis: insights from yeast. Biochim Biophys Acta 2001; 1535: 236-257.
10. White JM, Rose MD. Yeast mating: getting close to membrane merger. Curr Biol 2001; 11: R16-R20.
11. Routhier EL, Burn TC, Abbaszade I, Summers M, Albright CF, Prendergast GC. Human BIN3 complements the F-actin localization defects caused by loss of Hob3p, the fission yeast homolog of Rvs161p. J Biol Chem 2001; 276: 21670-21677.
12. De Camilli P, Thomas A, Cofiell R, et al. The synaptic vesicle-associated protein amphiphysin is the 128-kD autoantigen of Stiff-Man syndrome with breast cancer. J. Exp Med 1993; 178: 2219-2223.
13. Lichte B, Veh RW, Meyer HE, Kilimann MW. Amphiphysin, a novel protein associated with synaptic vesicles (published erratum appears in EMBO J 1992; 11: 3809). EMBO J 1992; 11: 2521-2530.
14. Sakamuro D, Elliott KJ, Wechsler-Reya R, Prendergast GC. BIN1 is a novel MYC-interacting protein with features of a tumour suppressor (see comments). Nature Genet 1996;14:69-77.
15. Wechsler-Reya R, Sakamuro D, Zhang J, Duhadaway J, Prendergast GC. Structural analysis of the human BIN1 gene. Evidence for tissue-specific transcriptional regulation and alternate RNA splicing. J Biol Chem 1997; 272: 31453-31458.
16. Kadlec L, Pendergast AM. The amphiphysin-like protein 1 (ALP1) interacts functionally with the cABL tyrosine kinase and may play a role in cytoskeletal regulation. Proc Natl Acad Sci USA 1997; 94: 12390-12395.
17. Crouzet M, Urdaci M, Dulau L, Aigle M. Yeast mutant affected for viability upon nutrient starvation: characterization and cloning of the RVS161 gene. Yeast 1991; 7: 727-743.
18. Bauer F, Urdaci M, Aigle M, Crouzet M. Alteration of a yeast SH3 protein leads to conditional viability with defects in cytoskeletal and budding patterns. Mol Cell Biol 1993; 13: 5070-5084.
19. Munn AL, Stevenson BJ, Geli MI, Riezman H. end5, end6, and end7: mutations that cause actin delocalization and block the internalization step of endocytosis in Saccharomyces cerevisiae. Mol Biol Cell 1995; 6: 1721-1742.
20. Sivadon P, Bauer F, Aigle M, Crouzet M. Actin cytoskeleton and budding pattern are altered in the yeast rvs161 mutant: the Rvs161 protein shares common domains with the brain protein amphiphysin. Mol Gen Genet 1995; 246: 485-495.
21. Balguerie A, Sivadon P, Bonneu M, et al. Rvs167p, the budding yeast homolog of amphiphysin, colocalizes with actin patches. J Cell Sci 1999; 112: 2529-2537.
22. Singer-Kruger B, Ferro-Novick S. Use of a synthetic lethal screen to identify yeast mutants impaired in endocytosis, vacuolar protein sorting and the organization of the cytoskeleton. Eur J Cell Biol 1997; 74: 365-375.
23. Singer-Kruger B, Stenmark H, Zerial M. Yeast Ypt51p and mammalian Rab5: counterparts with similar function in the early endocytic pathway. J Cell Sci 1995; 108: 3509-3521.
24. Brizzio V, Gammie AE, Rose MD. Rvs161p interacts with Fus2p to promote cell fusion in Saccharomyces cerevisiae. J Cell Biol 1998; 141: 567-584.
25. Breton AM, Schaeffer J, Aigle M. The yeast Rvs161 and Rvs167 proteins are involved in secretory vesicles targeting the plasma membrane and in cell integrity. Yeast 2001; 18: 1053-1068.
26. Breton AM, Aigle M. Genetic and functional relationship between Rvsp, myosin and actin in Saccharomyces cerevisiae. Curr Genet 1998; 34: 280-286.
27. Moreau V, Galan JM, Devilliers G, Haguenauer-Tsapis R, Winsor B. The yeast actin-related protein Arp2p is required for the internalization step of endocytosis. Mol Biol Cell 1997; 8: 1361-1375.
28. Mulholland J, Wesp A, Riezman H, Botstein D. Yeast actin cytoskeleton mutants accumulate a new class of Golgi-derived secretary vesicle. Mol Biol Cell 1997; 8: 1481-1499.
29. Li R. Beel, a yeast protein with homology to Wiscott-Aldrich syndrome protein, is critical for the assembly of cortical actin cytoskeleton. J Cell Biol 1997; 136: 649-658.
30. Desfarges L, Durrens P, Juguelin H, Cassagne C, Bonneu M, Aigle M. Yeast mutants affected in viability upon starvation have a modified phospholipid composition. Yeast 1993; 9: 267-277.
31. Durrens P, Revardel E, Bonneu M, Aigle M. Evidence for a branched pathway in the polarized cell division of Saccharomyces cerevisiae. Curr Genet 1995; 27: 213-216.
32. Navarro P, Durrens P, Aigle M. Protein-protein interaction between the RVS161 and RVS167 gene products of Saccharomyces cerevisiae. Biochim Biophys Acta 1997; 1343: 187-192.
33. Pruyne D, Bretscher A. Polarization of cell growth in yeast. J Cell Sci 2000; 113: 571-585.
34. Bon E, Recordon-Navarro P, Durrens P, Iwase M, Toh EA, Aigle M. A network of proteins around Rvs167p and Rvs161p, two proteins related to the yeast actin cytoskeleton. Yeast 2000; 16: 1229-1241.
35. Drees BL, Sundin B, Brazeau E, et al. A protein interaction map for cell polarity development. J Cell Biol 2001; 154: 549-571.
36. Amberg DC, Basart E, Botstein D. Defining protein interactions with yeast actin in vivo. Nature Struct Biol 1995; 2: 28-35.
37. Colwill K, Field D, Moore L, Friesen J, Andrews B. In vivo analysis of the domains of yeast Rvs167p suggests Rvs167p function is mediated through multiple protein interactions. Genetics 1999; 152: 881-893.
38. Madania A, Dumoulin P, Grava S, et al. The Saccharomyces cerevisiae homologue of human Wiskott-Aldrich syndrome protein Ias17p interacts with the Arp2/3 complex (In Process Citation). Mol Biol Cell 1999; 10: 3521-3538.
39. TerBush DR, Maurice T, Roth D, Novick P. The exocyst is a multiprotein complex required for exocytosis in Saccharomyces cerevisiae. EMBO J 1996; 15: 6483-6494.
40. Gaynor EC, Emr SD. COPI-independent anterograde transport: cargo-selective ER to Golgi protein transport in yeast COPI mutants. J Cell Biol 1997; 136: 789-802.
41. Strom M, Vollmer P, Tan TJ, Gallwitz D. A yeast GTPase-activating protein that interacts specifically with a member of the Ypt/Rab family. Nature 1993; 361: 736-739.
42. De Antoni A, Schmitzova J, Trepte HH, Gallwitz D, Albert S. Significance of GTP hydrolysis in Ypt1p-regulated endoplasmic reticulum to Golgi transport revealed by the analysis of two novel Ypt1-GAPs. J Biol Chem 2002; 277: 41023-41031.
43. Cao X, Barlowe C. Asymmetric requirements for a Rab GTPase and SNARE proteins in fusion of COPII vesicles with acceptor membranes. J. Cell Biol 2000; 149: 55-66.
44. Gammie AE, Brizzio V, Rose MD. Distinct morphological phenotypes of cell fusion mutants. Mol Biol Cell 1998; 9: 1395-1410.
45. Harper JW, Adami GR, Wei N, Keyomarsi K, Elledge SJ. The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases. Cell 1993; 75: 805-816.
46. Feilotter HE, Hannon GJ, Ruddell CJ, Beach D. Construction of an improved host strain for two hybrid screening. Nucleic Acids Res 1994; 22: 1502-1503.
47. Sherman F. Getting started with yeast. Methods Enzymol 1991; 194: 3-21.
48. Sherman F, Hicks J. Micromanipulation and dissection of asci. Methods Enzymol 1991; 194: 21-37.
49. Okayama H, Berg P. High-efficiency cloning of full-length cDNA. Mol Cell Biol 1982; 2: 161-170.
50. Chen DC, Yang BC, Kuo TT. One-step transformation of yeast in stationary phase. Curr Genet 1992; 21: 83-84.
51. Bi E, Chiavetta JB, Chen H, Chen GC, Chan CS, Pringle JR. Identification of novel, evolutionarily conserved Cdc42p-interacting proteins and of redundant pathways linking Cdc24p and Cdc42p to actin polarization in yeast. Mol Biol Cell 2000; 11: 773-793.
52. Feng S, Chen JK, Yu H, Simon JA, Schreiber SL. Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions. Science 1994; 266: 1241-1247.
53. Lupas A. Prediction and analysis of coiled-coil structures. Methods Enzymol 1996; 266: 513-525.
54. Pringle JR. Staining of bud scars and other cell wall chitin with calcofluor. Methods Enzymol 1991; 194: 732-735.
55. Sikorski RS, Hieter P. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 1989; 122: 19-27.
56. Cormack BP, Bertram G, Egerton M, Gow NA, Falkow S, Brown AJ. Yeast-enhanced green fluorescent protein (yEGFP)a reporter of gene expression in Candida albicans. Microbiology 1997; 143: 303-311.
57. Paulovich AG, Hartwell LH. A checkpoint regulates the rate of progression through S phase in S. cerevisiae in response to DNA damage. Cell 1995; 82: 841-847.
58. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990; 215: 403-410.
59. Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994; 22: 4673-4680.
60. Neuwald AF. A shared domain between a spindle assembly checkpoint protein and Ypt/Rab-specific GTPase-activators. Trends Biochem Sci 1997; 22: 243-244.
61. Albert S, Will E, Gallwitz D. Identification of the catalytic domains and their functionally critical arginine residues of two yeast GTPase-activating proteins specific for Ypt/Rab transport GTPases. EMBO J 1999; 18: 5216-5225.
62. Friesen H, Millman JS, Andrews BJ. Yeast functional genomics and cell biology: no longer in the dark. Genome Biol 2003; 4: 352.
63. Ho Y, Gruhler A, Heilbut A, et al. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 2002; 415: 180-183.
64. Cesareni G, Panni S, Nardelli G, Castagnoli L. Can we infer peptide recognition specificity mediated by SH3 domains? FEBS Lett 2002; 513: 38-44.
65. Ni L, Snyder M. A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell 2001; 12: 2147-2170.
66. Chu S, DeRisi J, Eisen M, et al. The transcriptional program of sporulation in budding yeast. Science 1998; 282: 699-705.
67. Galitski T, Saldanha AJ, Styles CA, Lander ES, Fink GR. Ploidy regulation of gene expression. Science 1999; 285: 251-254.
68. Wigge P, McMahon HT. The amphiphysin family of proteins and their role in endocytosis at the synapse. Trends Neurosci 1998; 21: 339-344.
69. Chant J. Cell polarity in yeast. Annu Rev Cell Dev Biol 1999; 15: 365-391.
70. Schultz J, Milpetz F, Bork P, Ponting CP. SMART, a simple modular architecture research tool: identification of signaling domains. Proc Natl Acad Sci USA 1998; 95: 5857-5864.
71. Hart MJ, Eva A, Evans T, Aaronson SA, Cerione RA. Catalysis of guanine nucleotide exchange on the CDC42Hs protein by the dbl oncogene product. Nature 1991; 354: 311-314.
72. Peter BJ, Kent BJ, Mills IG, et al. BAR domains as sensors of membrane curvature: the amphiphysin BAR structure. Science 2003, Jan 23; 303(5657): 495-496.