Cloning of the hamster p16 gene 5′ upstream region and its aberrant methylation patterns in pancreatic cancer

Biochemical and Biophysical Research Communications

Volumn 333, Issue 4, 2005, Pages 1249-1253

  Hanaoka, Madoka ^a   Shimizu, Kyoko ^a   Shigemura, Mayumi ^a   Kato, Ayumi ^a   Fujii, Hiromasa ^b   Honoki, Kanya ^b   Tsujiuchi, Toshifumi ^a  

^a KINKI UNIVERSITY   (Japan)

^b NARA MEDICAL UNIVERSITY   (Japan)

Author keywords

DNA methylation; Epigenetics; Hamster; Nitrosamine; p16

Indexed keywords

PROTEIN P16;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DEMETHYLATION; DNA FLANKING REGION; FEMALE; GENE EXPRESSION; HAMSTER; METHYLATION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PANCREAS; PANCREAS CANCER; PANCREAS CARCINOMA; PANCREAS DUCT; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; TECHNIQUE;

5' FLANKING REGION; ANIMALS; CHROMOSOME ABERRATIONS; CLONING, MOLECULAR; CRICETINAE; CYCLIN-DEPENDENT KINASE INHIBITOR P16; DNA METHYLATION; FEMALE; GENES, P16; HUMANS; MALE; MESOCRICETUS; PANCREATIC NEOPLASMS; POLYMERASE CHAIN REACTION; PROMOTER REGIONS (GENETICS); SEQUENCE ANALYSIS, DNA;

CRICETINAE;

EID: 21344474319     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2005.06.034     Document Type: Article

References (30)

1. R. Meehan, J. Lewis, S. Cross, X. Nan, P. Jeppesen, and A. Bird Transcriptional repression by methylation of CpG Cell Sci. Suppl. 16 1992 9 14
2. J.M. Zingg, and P.A. Jones Genetic and epigenetic aspects of DNA methylation on genome expression, evolution, mutation and carcinogenesis Carcinogenesis 18 1997 869 882
3. P.A. Jones, and P.W. Laird Cancer epigenetics comes of age Nat. Genet. 21 1999 163 167
4. S.B. Baylin, and J.G. Herman DNA hypermethylation in tumorigenesis: epigenetics joins genetics Trends Genet. 16 2000 168 174
5. M.F. Chan, G. Liang, and P.A. Jones Relationship between transcription and DNA methylation Curr. Top. Microbiol. Immunol. 249 2000 75 86
6. R.L. Adams, T. Davis, A. Rinaldi, and R. Eason CpG deficiency, dinucleotide distributions and nucleosome positioning Eur. J. Biochem. 165 1987 107 115
7. I. Keshet, W.J. Lieman, and H. Cedar DNA methylation affects the formation of active chromatin Cell 44 1986 535 543
8. P.A. Jones DNA methylation and cancer Oncogene 21 2002 5358 5360
9. P.A. Jones, and S.B. Baylin The fundamental role of epigenetic events in cancer Nat. Rev. Genet. 3 2002 415 428
10. J.F. Costello, M.C. Fruhwald, and D.J. Smiraglia Aberrant CpG-island methylation has non-random and tumor-type-specific patterns Nat. Genet. 24 2000 132 138
11. M. Esteller, P.G. Corn, S.B. Baylin, and J.G. Herman A gene hypermethylation profile of human cancer Cancer Res. 61 2001 3225 3229
12. M. Wada, S. Yazumi, S. Takaishi, K. Hasegawa, M. Sawada, H. Tanaka, H. Ida, C. Sakakura, K. Ito, Y. Ito, and T. Chiba Frequent loss of RUNX3 gene expression in human bile duct and pancreatic cancer cell lines Oncogene 23 2004 2401 2407
13. R. Dammann, U. Schagdarsurengin, L. Liu, N. Otto, H. Dralle, B.O. Boehm, G.P. Pfeifer, and V.C. Hoang Frequent RASSF1A promoter hypermethylation and K-ras mutations in pancreatic carcinoma Oncogene 22 2003 3806 3812
14. H. Matsubayashi, N. Sato, N. Fukushima, C.J. Yeo, K.M. Walter, K. Brune, F. Sahin, R.H. Hruban, and M. Goggins Methylation of cyclin D2 is observed frequently in pancreatic cancer but is also an age-related phenomenon in gastrointestinal tissues Clin. Cancer Res. 9 2003 1446 1452
15. P.A. Wingo, L.A. Ries, and G.A. Giovino Annual reports to the nation on the status of cancer J. Natl. Cancer Res. 91 1999 675 690
16. M. Yamamoto, O. Ohashi, and Y. Saitoh Japan pancreatic cancer registry: current status Pancreas 16 1998 238 242
17. K. Mizumoto, M. Tsutsumi, A. Denda, and Y. Konishi Rapid production of pancreatic carcinoma by initiation with N-nitrosobis(2-oxopropyl)amine and repeated augmentation pressure in hamsters J. Natl. Cancer Inst. 80 1988 1564 1567
18. K. Mizumoto, S. Kitazawa, and S. Ito Cycle of repeated augmentation pressure in rapid production of pancreatic and cholangiocellular carcinomas in hamsters initiated with N-nitrosobis(2-oxopropyl)amine Carcinogenesis 10 1989 1457 1459
19. K. Mizumoto, M. Tsutsumi, S. Kitazawa, A. Denda, and Y. Konishi Usefulness of a rapid production model for pancreatic carcinoma on male hamsters Cancer Lett. 49 1990 211 215
20. M. Tsutsumi, Y. Murakami, and S. Kondoh Comparison of K-ras oncogene activation in pancreatic duct carcinomas and cholangiocarcinomas induced in hamsters by N-nitrosobis(2-oxopropyl)amine Jpn. J. Cancer Res. 84 1993 956 960
21. M. Tsutsumi, S. Kondoh, and O. Noguchi K-ras gene mutation in early ductal lesions induced in a rapid production model for pancreatic carcinomas in Syrian hamsters Jpn. J. Cancer Res. 84 1993 1101 1105
22. S. Okita, M. Tsutsumi, Y. Onji, and Y. Konishi p53 mutation without allelic loss and absence of mdm-2 amplification in a transplantable hamster pancreatic ductal adenocarcinoma and derived cell lines but not primary ductal adenocarcinomas in hamsters Mol. Carcinog. 13 1995 266 271
23. T. Tsujiuchi, Y. Sasaki, T. Kubozoe, Y. Konishi, and M. Tsutsumi Alterations in the Fhit gene in pancreatic duct adenocarcinomas induced by N-nitrosobis(2-oxopropyl)amine in hamsters Mol. Carcinog. 36 2003 60 66
24. L. Diatchenko, Y.F.C. Lau, A.P. Campbell, A. Chenchik, F. Moqadan, B. Huang, S. Lukyanov, K. Lukyanov, N. Guraskaya, E.D. Sverdlov, and P.D. Siebert Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries Proc. Natl. Acad. Sci. USA 93 1996 6025 6030
25. M. Abe, E. Okochi, T. Kuramoto, A Kaneda, T. Takato, T. Sugimura, and T. Ushijima Cloning of the 5′ upstream region of rat p16 gene and its role in silencing Jpn. J. Cancer Res. 93 2002 1100 1106
26. INK4a gene and methylation pattern of CpG sites in the promoter region in rat tumor cell lines Mol. Carcinog. 39 2004 10 14
27. INK4a in primary rat lung tumor Mol. Cell. Biol. 17 1997 1366 1374
28. S.A. Belinsky, K.J. Nikula, W.A. Palmisano, R. Michels, G. Saccomanno, E. Gabrielson, S.B. Baylin, and J.G. Herman Aberrant methylation of is an early diagnosis Proc. Natl. Acad. Sci. USA 95 1998 11891 11896
29. INK4a/CDKN2A alterations in chemically induced Syrian golden hamster pancreatic tumors Carcinogenesis 25 2004 263 268
30. P.D. Siebert, A. Chenchik, D.E. Kellogg, K.A. Lukyanov, and S.A. Lukyanov An improved PCR method for walking in uncloned genomic DNA Nucleic Acids Res. 23 1995 1087 1088