메뉴 건너뛰기




Volumn 33, Issue 11, 2005, Pages 3606-3613

A T-stem slip in human mitochondrial tRNALeu(CUN) governs its charging capacity

Author keywords

[No Author keywords available]

Indexed keywords

LEUCINE TRANSFER RNA; MITOCHONDRIAL RNA; RNA; RNA, MITOCHONDRIAL;

EID: 21344452762     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gki677     Document Type: Article
Times cited : (20)

References (39)
  • 1
    • 0003056450 scopus 로고
    • Transfer RNA: An RNA for all season
    • Gestelandm,R.F. and Atkins,J.F. (eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Söll,D. (1993) Transfer RNA: An RNA for all season. In Gestelandm,R.F. and Atkins,J.F. (eds), The RNA World. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 157-183.
    • (1993) The RNA World , pp. 157-183
    • Söll, D.1
  • 3
    • 0033735040 scopus 로고    scopus 로고
    • Search for characteristic structural features of mammalian mitochondrial tRNAs
    • Helm,M., Brule,H., Friede,D., Giegé,R., Putz,D. and Florentz,C. (2000) Search for characteristic structural features of mammalian mitochondrial tRNAs. RNA, 6, 1356-1379.
    • (2000) RNA , vol.6 , pp. 1356-1379
    • Helm, M.1    Brule, H.2    Friede, D.3    Giegé, R.4    Putz, D.5    Florentz, C.6
  • 4
    • 0035797150 scopus 로고    scopus 로고
    • Human mitochondrial DNA diseases
    • Pulkes,T. and Hanna,M.G. (2001) Human mitochondrial DNA diseases. Adv. Drug Deliv. Rev., 49, 27-43.
    • (2001) Adv. Drug Deliv. Rev. , vol.49 , pp. 27-43
    • Pulkes, T.1    Hanna, M.G.2
  • 5
    • 0034958234 scopus 로고    scopus 로고
    • Disease-related versus polymorphic mutations in human mitochondrial tRNAs. Where is the difference?
    • Florentz,C. and Sissler,M. (2001) Disease-related versus polymorphic mutations in human mitochondrial tRNAs. Where is the difference? EMBO Rep., 2, 481-486.
    • (2001) EMBO Rep. , vol.2 , pp. 481-486
    • Florentz, C.1    Sissler, M.2
  • 6
    • 0033793308 scopus 로고    scopus 로고
    • Functional defects of pathogenic human mitochondrial tRNAs related to structural fragility
    • Kelley,S.O., Steinberg,S.V. and Schimmel,P. (2000) Functional defects of pathogenic human mitochondrial tRNAs related to structural fragility. Nature Struct. Biol., 7, 862-865.
    • (2000) Nature Struct. Biol. , vol.7 , pp. 862-865
    • Kelley, S.O.1    Steinberg, S.V.2    Schimmel, P.3
  • 7
    • 0346743541 scopus 로고    scopus 로고
    • Impact of disease-related mitochondrial mutations on tRNA structure and function
    • Wittenhagen,L.M. and Kelley,S.O. (2003) Impact of disease-related mitochondrial mutations on tRNA structure and function. Trends Biochem. Sci., 28, 605-611.
    • (2003) Trends Biochem. Sci. , vol.28 , pp. 605-611
    • Wittenhagen, L.M.1    Kelley, S.O.2
  • 8
    • 6044249065 scopus 로고    scopus 로고
    • Mitochondrial tRNA 3′ end metabolism and human disease
    • Levinger,L., Morl,M. and Florentz,C. (2004) Mitochondrial tRNA 3′ end metabolism and human disease. Nucleic Acids Res., 32, 5430-5441.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 5430-5441
    • Levinger, L.1    Morl, M.2    Florentz, C.3
  • 9
    • 0342614926 scopus 로고    scopus 로고
    • Codon usage tabulated from international DNA sequence databases: Status for the year 2000
    • Nakamura,Y., Gojobori,T. and Ikemura,T. (2000) Codon usage tabulated from international DNA sequence databases: Status for the year 2000. Nucleic Acids Res., 28, 292.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 292
    • Nakamura, Y.1    Gojobori, T.2    Ikemura, T.3
  • 10
    • 0028024359 scopus 로고
    • Point mutations in mitochondrial tRNA genes: Sequence analysis of chronic progressive external ophthalmoplegia (CPEO)
    • Hattori,Y., Goto,Y., Sakuta,R., Nonaka,I., Mizuna,Y. and Horai,S. (1994) Point mutations in mitochondrial tRNA genes: Sequence analysis of chronic progressive external ophthalmoplegia (CPEO). J. Neurol. Sci. 125, 50-55.
    • (1994) J. Neurol. Sci. , vol.125 , pp. 50-55
    • Hattori, Y.1    Goto, Y.2    Sakuta, R.3    Nonaka, I.4    Mizuna, Y.5    Horai, S.6
  • 11
    • 0001968230 scopus 로고
    • Primary, secondary and tertiary structures of tRNAs
    • Söll,D. and RajBhandary,U.L. (eds), American Society for Microbiology, Washington DC
    • Dirheimer,G., Keith,G., Dumas,P. and Westhof,E. (1995) Primary, secondary and tertiary structures of tRNAs. In Söll,D. and RajBhandary,U.L. (eds), tRNA Structure, Biosynthesis and Function. American Society for Microbiology, Washington DC, pp. 93-126.
    • (1995) TRNA Structure, Biosynthesis and Function , pp. 93-126
    • Dirheimer, G.1    Keith, G.2    Dumas, P.3    Westhof, E.4
  • 12
    • 0033166764 scopus 로고    scopus 로고
    • A modified procedure for fast purification of T7 RNA polymerase
    • Li,Y., Wang,E.D. and Wang,Y.L. (1999) A modified procedure for fast purification of T7 RNA polymerase. Protein Expr. Purif., 16, 355-358.
    • (1999) Protein Expr. Purif. , vol.16 , pp. 355-358
    • Li, Y.1    Wang, E.D.2    Wang, Y.L.3
  • 13
    • 0037672277 scopus 로고    scopus 로고
    • Human mitochondrial leucyl-tRNA synthetase with high activity produced from Escherichia coli
    • Yao,Y.N., Wang,L., Wu,X.F. and Wang,E.D. (2003) Human mitochondrial leucyl-tRNA synthetase with high activity produced from Escherichia coli. Protein Expr. Purif., 30, 112-116.
    • (2003) Protein Expr. Purif. , vol.30 , pp. 112-116
    • Yao, Y.N.1    Wang, L.2    Wu, X.F.3    Wang, E.D.4
  • 15
    • 0024804759 scopus 로고
    • Absorbance melting curves of RNA
    • Puglisi,J.D. and Tinoco,I.,Jr (1989) Absorbance melting curves of RNA. Methods Enzymol., 180, 304-325.
    • (1989) Methods Enzymol. , vol.180 , pp. 304-325
    • Puglisi, J.D.1    Tinoco Jr., I.2
  • 16
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker,M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res., 31, 3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 17
    • 0018370853 scopus 로고
    • Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs
    • Silberklang,M., Gillum,A.M. and RajBhandary,U.L. (1979) Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs. Methods Enzymol., 59, 58-109.
    • (1979) Methods Enzymol. , vol.59 , pp. 58-109
    • Silberklang, M.1    Gillum, A.M.2    RajBhandary, U.L.3
  • 18
    • 0032052242 scopus 로고    scopus 로고
    • The presence of modified nucleotides is required for cloverleaf folding of a human mitochondrial tRNA
    • Helm,M., Brule,H., Degoul,F., Cepanec,C., Leroux,J.P., Giegé,R. and Florentz,C. (1998) The presence of modified nucleotides is required for cloverleaf folding of a human mitochondrial tRNA. Nucleic Acids Res. 26, 1636-1643.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1636-1643
    • Helm, M.1    Brule, H.2    Degoul, F.3    Cepanec, C.4    Leroux, J.P.5    Giegé, R.6    Florentz, C.7
  • 19
    • 0019051754 scopus 로고
    • Chemical probes for higher-order structure in RNA
    • Peattie,D.A. and Gilbert,W. (1980) Chemical probes for higher-order structure in RNA. Proc. Natl Acad. Sci. USA, 77, 4679-4682.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 4679-4682
    • Peattie, D.A.1    Gilbert, W.2
  • 20
    • 0024828055 scopus 로고
    • A guide for probing native small nuclear RNA and ribonucleoprotein structures
    • Krol,A. and Carbon,P. (1989) A guide for probing native small nuclear RNA and ribonucleoprotein structures. Methods Enzymol., 180, 212-227.
    • (1989) Methods Enzymol. , vol.180 , pp. 212-227
    • Krol, A.1    Carbon, P.2
  • 21
    • 0033551417 scopus 로고    scopus 로고
    • Leu isoacceptors by the insertion mutant of Escherichia coli leucyl-tRNA synthetase
    • Leu isoacceptors by the insertion mutant of Escherichia coli leucyl-tRNA synthetase. Biochemistry, 38, 9084-9088.
    • (1999) Biochemistry , vol.38 , pp. 9084-9088
    • Li, T.1    Li, Y.2    Guo, N.N.3    Wang, E.D.4    Wang, Y.L.5
  • 22
    • 0036829558 scopus 로고    scopus 로고
    • Leucyl-tRNA synthetase consisting of two subunits from hyperthermophilic bacteria Aquifex aeolicus
    • Xu,M.G., Chen,J.F., Martin,F., Zhao,M.W., Eriani,G. and Wang,E.D. (2002) Leucyl-tRNA synthetase consisting of two subunits from hyperthermophilic bacteria Aquifex aeolicus. J. Biol. Chem., 277, 41590-41596.
    • (2002) J. Biol. Chem. , vol.277 , pp. 41590-41596
    • Xu, M.G.1    Chen, J.F.2    Martin, F.3    Zhao, M.W.4    Eriani, G.5    Wang, E.D.6
  • 23
    • 0022896833 scopus 로고
    • Nucleotide sequence and transcription of a human tRNA gene cluster with four genes
    • Chang,Y.N., Pirtle,I.L. and Pirtle,R.M. (1986) Nucleotide sequence and transcription of a human tRNA gene cluster with four genes. Gene, 48, 165-174.
    • (1986) Gene , vol.48 , pp. 165-174
    • Chang, Y.N.1    Pirtle, I.L.2    Pirtle, R.M.3
  • 24
  • 25
    • 0035815744 scopus 로고    scopus 로고
    • Fragile T-stem in disease-associated human mitochondrial tRNA sensitizes structure to local and distant mutations
    • Kelley,S.O., Steinberg,S.V. and Schimmel,P. (2001) Fragile T-stem in disease-associated human mitochondrial tRNA sensitizes structure to local and distant mutations. J. Biol. Chem., 276, 10607-10611.
    • (2001) J. Biol. Chem. , vol.276 , pp. 10607-10611
    • Kelley, S.O.1    Steinberg, S.V.2    Schimmel, P.3
  • 26
    • 0347093515 scopus 로고    scopus 로고
    • Interdomain communication between weak structural elements within a disease-related human tRNA
    • Roy,M.D., Wittenhagen,L.M., Vozzella,B.E. and Kelley,S.O. (2004) Interdomain communication between weak structural elements within a disease-related human tRNA. Biochemistry, 43, 384-392.
    • (2004) Biochemistry , vol.43 , pp. 384-392
    • Roy, M.D.1    Wittenhagen, L.M.2    Vozzella, B.E.3    Kelley, S.O.4
  • 27
    • 2342527084 scopus 로고    scopus 로고
    • Recognition of human mitochondrial tRNALeu(UUR) by its cognate leucyl-tRNA synthetase
    • Sohm,B., Sissler,M., Park,H., King,M.P. and Florentz,C. (2004) Recognition of human mitochondrial tRNALeu(UUR) by its cognate leucyl-tRNA synthetase. J. Mol. Biol., 339, 17-29.
    • (2004) J. Mol. Biol. , vol.339 , pp. 17-29
    • Sohm, B.1    Sissler, M.2    Park, H.3    King, M.P.4    Florentz, C.5
  • 28
    • 0037052929 scopus 로고    scopus 로고
    • Identification of essential domains for Escherichia coli tRNALeu aminoacylation and amino acid editing using minimalist RNA molecules
    • Larkin,D., Williams,A., Martinis,S. and Fox,G. (2002) Identification of essential domains for Escherichia coli tRNALeu aminoacylation and amino acid editing using minimalist RNA molecules. Nucleic Acids Res. 30, 2103-2113.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 2103-2113
    • Larkin, D.1    Williams, A.2    Martinis, S.3    Fox, G.4
  • 30
    • 0032582796 scopus 로고    scopus 로고
    • In vitro selection of RNAs aminoacylated by Escherichia coli leucyl-tRNA synthetase
    • Asahara,H., Nameki,N. and Hasegawa,T. (1998) In vitro selection of RNAs aminoacylated by Escherichia coli leucyl-tRNA synthetase. J. Mol. Biol., 283, 605-618.
    • (1998) J. Mol. Biol. , vol.283 , pp. 605-618
    • Asahara, H.1    Nameki, N.2    Hasegawa, T.3
  • 33
    • 0028144722 scopus 로고
    • Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem
    • Watanabe,Y., Tsurui,H., Ueda,T., Furushima,R., Takamiya,S., Kita,K., Nishikawa,K. and Watanabe,K. (1994) Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem. J. Biol. Chem., 269, 22902-22906.
    • (1994) J. Biol. Chem. , vol.269 , pp. 22902-22906
    • Watanabe, Y.1    Tsurui, H.2    Ueda, T.3    Furushima, R.4    Takamiya, S.5    Kita, K.6    Nishikawa, K.7    Watanabe, K.8
  • 34
    • 0038613099 scopus 로고    scopus 로고
    • Alternative tertiary structure of tRNA for recognition by a posttranscriptional modification enzyme
    • Ishitani,R., Nureki,O., Nameki,N., Okada,N., Nishimura,S. and Yokoyama,S. (2003) Alternative tertiary structure of tRNA for recognition by a posttranscriptional modification enzyme. Cell, 113, 383-394.
    • (2003) Cell , vol.113 , pp. 383-394
    • Ishitani, R.1    Nureki, O.2    Nameki, N.3    Okada, N.4    Nishimura, S.5    Yokoyama, S.6
  • 37
    • 6344221310 scopus 로고    scopus 로고
    • Codon-specific translational defect caused by a wobble modification deficiency in mutant tRNA from a human mitochondrial disease
    • Kirino,Y., Yasukawa,T., Ohta,S., Akira,S., Ishihara,K., Watanabe,K. and Suzuki,T. (2004) Codon-specific translational defect caused by a wobble modification deficiency in mutant tRNA from a human mitochondria! disease. Proc. Natl Acad. Sci. USA, 101, 15070-15075.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 15070-15075
    • Kirino, Y.1    Yasukawa, T.2    Ohta, S.3    Akira, S.4    Ishihara, K.5    Watanabe, K.6    Suzuki, T.7
  • 38
    • 1942469358 scopus 로고    scopus 로고
    • Aminoacylation properties of pathology-related human mitochondrial tRNA(Lys) variants
    • Sissler,M., Helm,M., Frugier,M., Giegé,R. and Florentz,C. (2004) Aminoacylation properties of pathology-related human mitochondrial tRNA(Lys) variants. RNA, 10, 841-853.
    • (2004) RNA , vol.10 , pp. 841-853
    • Sissler, M.1    Helm, M.2    Frugier, M.3    Giegé, R.4    Florentz, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.