The presence of modified nucleotides is required for cloverleaf folding of a human mitochondrial tRNA

Nucleic Acids Research

Volumn 26, Issue 7, 1998, Pages 1636-1643

  Helm, Mark ^a   Brulé, Hervé ^a,b   Degoul, Françoise ^b   Cepanec, Claude ^b   Leroux, Jean Paul ^b   Giegé, Richard ^a   Florentz, Catherine ^a,c  

^a INST DE BIOL MOLEC ET CELLULAIRE   (France)

^b INSERM   (France)

^c CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL RNA; NUCLEASE; NUCLEOTIDE; TRANSFER RNA;

ARTICLE; HUMAN; PHYLOGENY; PRIORITY JOURNAL; RNA SEQUENCE; RNA STRUCTURE;

CLONING, ORGANISM; FEMALE; HUMANS; METHYLATION; MITOCHONDRIA; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; NUCLEIC ACID CONFORMATION; PHYLOGENY; PLACENTA; POLYMERASE CHAIN REACTION; PREGNANCY; RNA; RNA EDITING; RNA, TRANSFER, LYS; TRANSCRIPTION, GENETIC; VARIATION (GENETICS);

EID: 0032052242     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.7.1636     Document Type: Article

References (53)

1. Dreher, T.W., Bujarski, J.J. and Hall, T.C. (1984) Nature, 311, 171-175.
2. Sampson, J.R. and Uhlenbeck, O.C. (1988) Proc. Natl. Acad. Sci. USA, 85, 1033-1037.
3. Gesteland, R.F. and Atkins, J.F. (eds) (1993) The RNA World. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
4. Nagai, K. (1993) Mol. Biol. Rep., 18, 105-112.
5. Giegé, R., Puglisi, J.D. and Florentz, C. (1993) Prog. Nucleic Acid Res. Mol. Biol., 45, 129-206.
6. McClain, W.H. (1995) In Söll, D. and RajBhandary, U.L. (eds), tRNA: Structure, Biosynthesis and Function. American Society for Microbiology Press, Washington, DC, pp. 335-347.
7. Saks, M.E., Sampson, J.R. and Abelson, J.N. (1994) Science, 263, 191-197.
8. Perret, V., Garcia, A., Puglisi, J.D., Grosjean, H., Ebel, J.-P., Florentz, C. and Giegé, R. (1990) Biochimie, 72, 735-744.
9. Derrick, W.B. and Horowitz, J. (1993) Nucleic Acids Res., 21, 4948-4953.
10. Hall, K.B., Sampson, J.R., Uhlenbeck, O.C. and Redfield, A.G. (1989) Biochemistry, 28, 5794-5801.
11. Chu, W.-C. and Horowitz, J. (1991) Biochemistry, 30, 1655-1663.
12. Yue, D., Kintanar, A. and Horowitz, J. (1994) Biochemistry, 33, 8905-8911.
13. Arnez, J.G. and Steitz, T.A. ( 1994) Biochemistry, 33, 7560-7567.
14. Agris, P.F. (1996) Prog. Nucleic Acid Res. Mol. Biol., 53, 79-129.
15. Muramatsu, T., Nishikawa, K., Nemoto, F., Kuchino, Y., Nishimura, S., Miyazawa, T. and Yokoyama, S. (1988) Nature, 336, 179-181.
16. Ohtsuki, T., Kawai, G., Watanabe, Y.I, Kita, K., Nishikawa, K. and Watanabe, K. (1996) Nucleic Acids Res., 24, 662-667.
17. Shoffner, J., Lott, M., Lezza, A.M.S., Seibel, P., Ballinger, S.W. and Wallace, D.C. (1990) Cell, 61, 931-937.
18. Enriquez, J.A., Chomyn, A. and Attardi, G. (1995) Nature Genet., 10, 47-55.
19. Becker, H.D., Giegé, R. and Kern, D. (1996) Biochemistry, 35, 7447-7458.
20. Gasnier, F., Rousson, R., Lermé, F., Vaganay, E., Louisot, P. and Gateau-Roesch, O. (1993) Anal. Biochem., 212, 173-178.
21. Schnaitman, C. and Greenawalt, J.W. (1968) J. Cell. Biol., 38, 158-175.
22. Roe, B.A. (1975) Nucleic Acids Res., 2, 21-42.
23. Mörl, M., Dorner, M. and Pääbo, S. (1994) In Uhlén, M., Hornes, E. and Olsvik, O. (eds), Advances in Biomagnetic Separation. Eaton Publishing, Natik, MA, pp. 107-111.
24. Mörl, M., Dörner, M. and Pääbo, S. (1995) Nucleic Acids Res., 23, 3380-3384.
25. Stanley, J. and Vassilenko, S. (1978) Nature, 274, 87-89.
26. Keith, G. (1995) Biochimie, 77, 142-144.
27. Anderson, S., Bankier, A.T., Barrel, B.G., deBruijn, M.H.L., Coulson, A.R., Drouin, J., Eperon, J.C., Nierlich, D.P., Roe, B.A., Sanger, F., Schreier, P.H., Smith, A.J.H., Staden, R. and Young, I.G. (1981) Nature, 290, 457-465.
28. Jia, Y. and Patel, S.S. (1997) J. Biol. Chem., 272, 30147-30153.
29. Rudinger, J., Felden, B., Florentz, C. and Giegé, R. (1997) Bioorg. Med. Chem., 6, 1001-1009.
30. Perret, V., Florentz, C. and Giegé, R. (1990) FEBS Lett., 270, 4-8.
31. Silberklang, F., Gillum, A.M. and RhajBhandary, U.L. (1979) Methods Enzymol., 59, 58-109.
32. Peattie, D.A. and Gilbert, W. (1980) Proc. Natl. Acad. Sci. USA, 77, 4679-4682.
33. Vlassov, V.V., Zuber, G., Felden, B., Behr, J.-P. and Giegé, R. (1995) Nucleic Acids Res., 23, 3161-3167.
34. Lempereur, L., Nicoloso, M., Riehl, N., Ehresmann, C., Ehresmann, B. and Bachellerie, J.-P. (1985) Nucleic Acids Res., 13, 8339-8357.
35. Ehresmann, C., Baudin, F., Mougel, M., Romby, P., Ebel, J.-P. and Ehresmann, B. (1987) Nucleic Acids Res., 15, 9109-9128.
36. Sanger, F., Nicklen, S. and Coulson, A.R. (1977) Proc. Natl. Acad. Sci. USA, 74, 5463-5467.
37. DeBruijn, M.H.L. Schreier, P.H., Eperon, I.C. and Barell, B.G. (1980) Nucleic Acids Res., 8, 5213-5222.
38. Brulé, H., Holmes, W.M., Keith, G., Giegé, R. and Florentz, C. (1998) Nucleic Acids Res., 26, 537-543.
39. Sprinzl, M., Horn, C., Brown, M., Ioudovitch, A. and Steinberg, S. (1998) Nucleic Acids Res., 26, 148-153.
40. Randerath, E., Agrawal, H.P. and Randerath, K. (1981) Biochem. Biophys. Res. Commun., 103, 739-744.
41. Hsuchen, C.C., Cleaves, G.R. and Dubin, D.T. (1983) Nucleic Acids Res., 11, 6859-6862.
42. Krzyzosiak, W.J., Marciniec, T., Wiewiorowsky, M., Romby, P., Ebel, J.-P. and Giegé, R. (1988) Biochemistry, 27, 5771-5777.
43. Behlen, L.S., Sampson, J.R., DiRenzo, A.B. and Uhlenbeck, O.C. (1990) Biochemistry, 29, 2515-2523.
44. Pan, T., Long, D.M. and Uhlenbeck, O.C. (1993) In Gesteland, R.F. and Atkins, J.F. (eds), The RNA World. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
45. Isel, C., Ehresmann, C., Keith, G., Ehresmann, B. and Marquet, R. (1995) J. Mol. Biol., 247, 236-250.
46. Leehey, M.A., Squassoni, C.A., Friederich, M.W., Mills, J.B. and Hagerman, P.J. (1995) Biochemistry, 34, 16235-16239.
47. Björk, G.R. (1995) In Söll, D. and RajBhandary, U.L. (eds), tRNA: Structure, Biosynthesis and Function. American Society for Microbiology Press, Washington, DC, pp. 165-205.
48. Grosjean, H. and Benne, R. (eds) (1998) Modification and Editing of RNA. American Society for Microbiology Press, Washington, DC.
49. Kowalak, J.A., Dalluge, J.J., McCloskey, J.A. and Stetter, K.O. (1994) Biochemistry, 33, 7869-7876.
50. Steinberg, S. and Cedergren, R. (1995) RNA, 1, 886-891.
51. Schuster, P., Fontana, W., Stadler, P.F. and Hofacker, I.L. (1994) Proc. R. Soc. Lond., 255, 279-284.
52. Agris, P.F., Guenther, R., Ingram, P.C., Basti, M.M., Sturat, J.W., Sochacka, E. and Malkiewicz, A. (1997) RNA, 3, 420-428.
53. Kikuchi, Y. and Sasaki, N. (1992) J. Biol. Chem., 267, 11972-11976.