Heat capacity in proteins

Annual Review of Physical Chemistry

Volumn 56, Issue , 2005, Pages 521-548

  Prabhu, Ninad V ^a   Sharp, Kim A ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

Author keywords

Entropy enthalpy compensation; Hydrophobic effect; Protein hydration; Protein stability

Indexed keywords

CALORIMETRY; CONVERGENCE OF NUMERICAL METHODS; ENTHALPY; ENTROPY; HYDRATION; HYDROPHOBICITY; SPECIFIC HEAT;

ENTROPY-ENTHALPY COMPENSATION; HYDROPHOBIC EFFECT; PROTEIN HYDRATION; PROTEIN STABILITY;

PROTEINS;

PROTEIN; WATER;

BIOLOGICAL MODEL; CHEMISTRY; COLD; HEAT; PROTEIN DENATURATION; REVIEW;

COLD; HEAT; MODELS, BIOLOGICAL; PROTEIN DENATURATION; PROTEINS; WATER;

EID: 21244442969     PISSN: 0066426X     EISSN: None     Source Type: Book Series    
DOI: 10.1146/annurev.physchem.56.092503.141202     Document Type: Article

References (101)

1. Ma S-K. 1976. Statistical Mechanics. Philadelphia: World Sci.
2. Meirovitch H. 1999. J. Chem. Phys. 111: 7215-24
3. Privalov PL, Gill SJ. 1988. Adv. Protein Chem. 39:191-234
4. Makhatadze GI, Privalov PL. 1990. J. Mol. Biol. 213:375-84
5. Privalov PL, Makhatadze GI. 1990. J. Mol Biol. 213:385-91
6. Silverstein KAT, Haymet ADJ, Dill KA. 2000. J. Am. Chem. Sci. 122:8037-41
7. Hummer G, Garde S, Garcia AE, Pratt LR. 2000. Chem. Phys. 258:349-70
8. Brandts JF. 1992. Biochemistry 31:3947-55
9. McQuarrie D. 1976. Statistical Mechanics. New York: Harper & Row
10. Poland D. 2001. Biopolymers 58:89-105
11. Poland D. 2002. Biopolymers 63:59-65
12. Murphy KP, Privalov PL, Gill SJ. 1990. Science 247:559-61
13. Baldwin R. 1986. Proc. Natl. Acad. Sci. USA 83:8069-72
14. Murphy KP, Gill SJ. 1991. J. Mol. Biol. 222:699-709
15. Murphy K, Gill S. 1990. Thermochim. Acta 172:11-20
16. Robertson AD, Murphy KP. 1997. Chem. Rev. 97:1251-67
17. Privalov PL. 1990. Crit. Rev. Biochem. Mol. Biol. 25:281-305
18. Guzman-Casado M, Parody-Morreale A, Robic S, Marqusee S, Sanchez-Ruiz JM. 2003. J. Mol. Biol. 329:731-43
19. Robic S, Berger JM, Marqusee S. 2002. Protein Sci. 11:381-89
20. Perl D, Schmid FX. 2002. Chem. BioChem. 3:39-44
21. Ladbury JE, Wright JG, Sturtevant JM, Sigler PB. 1994. J. Mol. Biol. 238:669-81
22. Lundback T, Chang JF, Phillips K, Luisi B, Ladbury JE. 2000. Biochemistry 39:7570-79
23. Engler LE, Sapienza P, Dorner LF, Kucera R, Schildkraut I, Jen-Jacobson L. 2001. J. Mol. Biol. 307:619-36
24. Jen-Jacobson L, Engler LE, Ames JT, Kurpiewski MR, Grigorescu A. 2000. Supramol. Chem. 12:143-60
25. Naghibi H, Tamura A, Sturtevant JM. 1995. Proc. Natl. Acad. Sci. USA 92: 5597
26. Liu YF, Sturtevant JM. 1997. Biophys. Chem. 64:121-26
27. Hallerbach B, Hinz HJ. 1999. Biophys. Chem. 76:219-27
28. Weber G. 1995. J. Phys. Chem. 99:1052-59
29. Chaires JB. 1996. Biophys. Chem. 64:15-23
30. Ragone R, Colonna G. 1995. J. Phys. Chem. 99:13050
31. Holtzer A. 1995. J. Phys. Chem. 99:13048
32. Eftink M, Biltonen R. 1983. Biochemistry 22:3884-96
33. Freire E. 1994. Methods Enzymol. 240: 502-30
34. Horn J, Russell D, Lewis E, Murphy KP. 2001. Biochemistry 40:1774-78
35. Horn J, Brandts J, Murphy KP. 2002. Biochemistry 41:7501-7
36. Dill KA. 1997. J. Biol. Chem. 272:701-4
37. Mark AE, van Gunsteren WF. 1994. J. Mol. Biol. 240:167-76
38. Smith PE, van Gunsteren WF. 1994. J. Phys. Chem. 98:13735-40
39. Brady GP, Sharp KA. 1995. J. Mol. Biol. 254:77-85
40. Boresch S, Karplus M. 1995. J. Mol. Biol. 254:801-7
41. Archontis G, Karplus M. 1996. J. Chem. Phys. 105:11246-60
42. Brady GP, Szabo A, Sharp KA. 1996. J. Mol. Biol. 263:123-25
43. Privalov PL, Makhatadze GI. 1993. J. Mol. Biol. 232:660-79
44. Makhatadze GI, Privalov PL. 1993. J. Mol. Biol. 232:639-59
45. Sturtevant JM. 1977. Proc. Natl. Acad. Sci. USA 74:2236-40
46. Garde S, Hummer G, Garcia AE, Paulaitis ME, Pratt LR. 1996. Phys. Rev. Lett. 77: 4966-68
47. Graziano G, Lee B. 2003. Biophys. Chem. 105:241-50
48. Yang AS, Sharp KA, Honig B. 1992. J. Mol. Biol. 227:889-900
49. Lee BK. 1991. Proc. Natl. Acad. Sci. USA 88:5154-58
50. Baldwin RL, Muller N. 1992. Proc. Natl. Acad. Sci. USA 89:7110-13
51. Murphy KP. 1994. Biophys. Chem. 51: 511
52. Huang DM, Chandler D. 2000. Proc. Natl. Acad. Sci. USA 97:8324-27
53. Hilser VJ, Gomez J, Freire E. 1996. Proteins 26:123-33
54. Hilser VJ, Dowdy D, Oas TG, Freire E. 1998. Proc. Natl. Acad. Sci. USA 95: 9903-8
55. Freire E. 1999. Proc. Natl. Acad. Sci. USA 96:10118-22
56. Paschek D. 2004. J. Chem. Phys. 120: 10605-17
57. Velicelebi G, Sturtevant JM. 1979. Biochemistry 18:1180-86
58. Makhatadze GI, Privalov PL. 1995. Adv. Prot. Chem. 47:307-425
59. Spolar RS, Livingstone JR, Record MT Jr. 1992. Biochemistry 31:3947-55
60. Spolar RS, Record MT J Jr. 1994. Science 263:777-84
61. Myers JK, Pace CN, Scholtz JM. 1995. Protein Sci. 4:2138-48
62. Lazaridis T, Karplus M. 1999. Biophys. Chem. 78:207-17
63. Shortle D, Ackerman MS. 2001. Science 293:487-89
64. Loladze VV, Ermolenko DN, Makhatadze GI. 2001. Protein Sci. 10:1343-52
65. Dadarlat VM, Post CB. 2001. J. Phys. Chem. B 105:715-24
66. Liang J, Dill KA. 2001. Biophys. J. 81: 751-66
67. Richardson JM, Makhatadze G. 2004. J. Mol. Biol. 335:1029-37
68. García AE, Sanbonmatsu KY. 2002. Proc. Natl. Acad. Sci. USA 99:2782-87
69. Cooper A, Johnson CM, Lakey JH, Nollmann M. 2001. Biophys. Chem. 93:215-30
70. Deep S, Ahluwalia JC. 2002. Biophys Chem. 97:73-77
71. Hilser VJ, Freire E. 1996. J. Mol. Biol. 262:756-72
72. Hilser VJ, Freire E. 1997. Proteins: Struct. Funct. Genet. 27:171-83
73. Sharp KA, Madan B. 2001. Biophys. J. 81: 1881-87
74. Gill SJ, Dec SF, Olofsson G, Wadso I. 1985. J. Phys. Chem. 89:3758-61
75. Muller N. 1990. Acc. Chem. Res. 23:23-28
76. Lee B, Graziano G. 1996. J. Am. Chem. Soc. 118:5163-68
77. Bosio L, Chen SH, Teixeira J. 1983. Phys. Rev. A 27:1468-75
78. Bakk A, Hoye JS, Hansen A. 2001. Biophys. J. 81:710-14
79. Bakk A, Hoye JS, Hansen A. 2002. Biophys. J. 82:713-19
80. Lee BK. 1985. Biopolymers 24:813-23
81. Pratt L, Chandler D. 1977. J. Chem. Phys. 67:3683-705
82. Lum K, Chandler D, Weeks D. 1999. J. Phys. Chem. 103:4570-77
83. Chandler D. 2002. Nature 417:491
84. Huang D, Chandler D. 2002. J. Phys. Chem. 10653:2047
85. Pohorille A, Pratt L. 1990. J. Am. Chem. Soc. 112:5066-74
86. Pratt L, Pohorille A. 1992. Proc. Natl. Acad. Sci. USA 89:2995-99
87. Hummer G, Garde S, Garcia A, Pohorille A, Pratt L. 1996. Proc. Natl. Acad. Sci. USA 93:8951
88. Arthur JW, Haymet ADJ. 1999. J. Chem. Phys. 110:5873-83
89. Southall NT, DillKA, Haymet ADJ. 2002. J. Phys. Chem. 106:521-33
90. Henn AR, Kauzmann W. 1989. J. Phys. Chem. 93:3770-83
91. Madan B, Sharp KA. 1996. J. Phys. Chem. 100:7713-21
92. Sharp KA, Madan B. 1997. J. Phys. Chem. 101:4343-48
93. Madan B, Sharp KA. 1997. J. Phys. Chem. 101:11237-42
94. Vanzi F, Madan B, Sharp K. 1998. J. Am. Chem. Soc. 120:10748-53
95. Madan B, Sharp K. 1999. Biophys. Chem. 78:33-41
96. Madan B, Sharp KA. 2000. J. Phys. Chem. 104:12047
97. Gallagher K, Sharp KA. 2003. J. Am. Chem. Sci. 125:9863-60
98. Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML. 1983. J. Chem. Phys. 79:926
99. Sharp KA, Madan B, Manas E, Vanderkooi JM. 2001. J. Chem. Phys. 114: 1791-96
100. Babu CR, Hilser VJ, Wand AJ. 2004. Nat. Struct. Mol. Biol. 11:352-57
101. Murphy K, Freke E. 1992. Adv. Prot. Chem. 43:313-61