Probing Trypanosoma cruzi biology with DNA microarrays

Parasitology

Volumn 128, Issue SUPPL., 2004, Pages

  Burleigh, B A ^a  

^a HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

Author keywords

Chagas' disease; Differentiation; Host response; Microarray; Trypanosome

Indexed keywords

CHAGAS DISEASE; CONFERENCE PAPER; DISEASE COURSE; DNA MICROARRAY; GENETIC TRANSCRIPTION; HOST PARASITE INTERACTION; IMMUNE RESPONSE; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SPECIES DIFFERENTIATION; TRYPANOSOMA CRUZI;

ANIMALS; CHAGAS DISEASE; DISEASE MODELS, ANIMAL; GENOME, PROTOZOAN; HOST-PATHOGEN INTERACTIONS; HUMANS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; TRANSCRIPTION, GENETIC; TRYPANOSOMA CRUZI;

TRYPANOSOMA CRUZI;

EID: 20444452402     PISSN: 00311820     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0031182004006559     Document Type: Conference Paper

References (58)

1. ANDREWS, N. W. (1994). From lysosomes into the cytosol: the intracellular pathway of Trypanosoma cruzi. Brazilian Journal of Medicine and Biological Research 27, 471-475.
2. AOKI, M. P., GUINAZU, N., PELLEGRINI, A., GOTOH, T., MASIH, D. T. & GEA, S. (2004). Cruzipain, a Major Trypanosoma cruzi Antigen, Promotes Arginase-2 Expression and Survival of Neonatal Mouse Cardiomyocytes. American Journal of Physiology. Cell Physiology 286, C206-C212.
3. AVILA, A. R., DALLAGIOVANNA, B., YAMADA-OGATTA, S. F., MONTEIRO-GOES, V., FRAGOSO, S. P., KRIEGER, M. A. & GOLDENBERG, S. (2003). Stage-specific gene expression during Trypanosoma cruzi metacyclogenesis. Genetics and Molecular Research 2, 159-168.
4. AVILA, A. R., YAMADA-OGATTA, S. F., DA SILVA MONTEIRO, V., KRIEGER, M. A., NAKAMURA, C. V., DE SOUZA, W. & GOLDENBERG, S. (2001). Cloning and characterization of the metacyclogenin gene, which is specifically expressed during Trypanosoma cruzi metacyclogenesis. Molecular and Biochemical Parasitology 117, 169-177.
5. BALL, C. A., SHERLOCK, G., PARKINSON, H., ROCCA-SERA, P., BROOKSBANK, C., CAUSTON, H. C., CAVALIERI, D., GAASTERLAND, T., HINGAMP, P., HOLSTEGE, F., RINGWALD, M., SPELLMAN, P., STOECKERT, C. J. Jr., STEWART, J. E., TAYLOR, R., BRAZMA, A. & QUACKENBUSH, J. (2002). Standards for microarray data. Science 298, 539.
6. BASOMBRIO, M. A., SEGURA, M. A., GOMEZ, L. & PADILLA, M. (2000). Studies on the virulence and attenuation of Trypanosoma cruzi using immunodeficient animals. Memórias do Instituto Oswaldo Cruz 95, 175-178.
7. BEVERLEY, S. M. (2003). Protozomics: trypanosomatid parasite genetics comes of age. Nature Reviews. Genetics 4, 11-19.
8. BIRON, C. A., NGUYEN, K. B., PIEN, G. C., COUSENS, L. P. & SALAZAR-MATHER, T. P. (1999). Natural killer cells in antiviral defense: function and regulation by innate cytokines. Annual Review of Immunology 17, 189-220.
9. BLADER, I. J., MANGER, I. D. & BOOTHROYD, J. C. (2001). Microarray analysis reveals previously unknown changes in Toxoplasma gondii-infected human cells. Journal of Biological Chemistry 276, 24223-24231.
10. BLOM, I. E., GOLDSCHMEDING, R. & LEASK, A. (2002). Gene regulation of connective tissue growth factor: new targets for antifibrotic therapy? Matrix Biology 21, 473-482.
11. BOOTHROYD, J. C., BLADER, I., CLEARY, M. & SINGH, U. (2003). DNA microarrays in parasitology: strengths and limitations. Trends in Parasitology 19, 470-476.
12. BRAZMA, A. (2001). On the importance of standardisation in life sciences. Bioinformatics 17, 113-114.
13. BRAZMA, A., HINGAMP, P., QUACKENBUSH, J., SHERLOCK, G., SPELLMAN, P., STOECKERT, C., AACH, J., ANSORGE, W., BALL, C. A., CAUSTON, H. C., GAASTERLAND, T., GLENISSON, P., HOLSTEGE, F. C., KIM, I. F., MARKOWITZ, V., MATESE, J. C., PARKINSON, H., ROBINSON, A., SARKANS, U., SCHULZE-KREMER, S., STEWART, J., TAYLOR, R., VILO, J. & VINGRON, M. (2001). Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nature Genetics 29, 365-371.
14. BURLEIGH, B. A., CALER, E. V., WEBSTER, P. & ANDREWS, N. W. (1997). A cytosolic serine endopeptidase from Trypanosoma cruzi is required for the generation of Ca2+ signaling in mammalian cells. Journal of Cell Biology 136, 609-620.
15. BURLEIGH, B. A. & WOOLSEY, A. M. (2002). Cell signalling and Trypanosoma cruzi invasion. Cellular Microbiology 4, 701-711.
16. CHAMOND, N., GREGOIRE, C., COATNOAN, N., ROUGEOT, C., FREITAS-JUNIOR, L. H., DA SILVEIRA, J. F., DEGRAVE, W. M. & MINOPRIO, p. (2003). Biochemical characterization of proline racemases from the human protozoan parasite Trypanosoma cruzi and definition of putative protein signatures. Journal of Biological Chemistry 278, 15484-15494.
17. CHARRON, A. J. & SIBLEY, L. D. (2002). Host cells: mobilizable lipid resources for the intracellular parasite Toxoplasma gondii. Journal of Cell Science 115, 3049-3059.
18. CHUENKOVA, M. V., FURNARI, H. B., CAVENEE, W. K. & PEREIRA, M. A. (2001). Trypanosoma cruzi trans-sialidase: a potent and specific survival factor for human Schwann cells by means of phosphatidylinositol 3-kinase/Akt signaling. Proceedings of the National Academy of Sciences, USA 98, 9936-9941.
19. COPPENS, I., SINAI, A. P. & JOINER, K. A. (2000). Toxoplasma gondii exploits host low-density lipoprotein receptor-mediated endocytosis for cholesterol acquisition. Journal of Cell Biology 149, 167-180.
20. CRANE, M. S. & DVORAK, J. A. (1979). Trypanosoma cruzi: interaction with vertebrate cells. DNA synthesis and growth of intracellular amastigotes and their relationship to host cell DNA synthesis and growth. Journal of Protozoology 26, 599-604.
21. DAVIES, M. J., ROSS, A. M. & GUTTERIDGE, W. E. (1983). The enzymes of purine salvage in Trypanosoma cruzi, Trypanosoma brucei and Leishmania mexicana. Parasitology 87, 211-217.
22. DE AVALOS, S. V., BLADER, I. J., FISHER, M., BOOTHROYD, J. C. & BURLEIGH, B. A. (2002). Immediate/early response to Trypanosoma cruzi infection involves minimal modulation of host cell transcription. Journal of Biological Chemistry 277, 639-644.
23. DIAS, J. C., SILVEIRA, A. C. & SCHOFIELD, C. J. (2002). The impact of Chagas disease control in Latin America: a review. Memórias do Instituto Oswaldo Cruz 97, 603-612.
24. DUNCAN, M. R., FRAZIER, K. S., ABRAMSON, S., WILLIAMS, S., KLAPPER, H., HUANG, X. & GROTENDORST, G. R. (1999). Connective tissue growth factor mediates transforming growth factor beta-induced collagen synthesis: down-regulation by cAMP. Faseb Journal 13, 1774-1786.
25. DUTHIE, M. S., WLEKLINSKI-LEE, M., SMITH, S., NAKAYAMA, T., TANIGUCHI, M. & KAHN, S. J. (2002). During Trypanosoma cruzi infection CD1d-restricted NK T cells limit parasitemia and augment the antibody response to a glycophosphoinositol-modified surface protein. Infection and Immunity 70, 36-48.
26. ENGEL, J. C., TORRES, C., HSIEH, I., DOYLE, P. S., MCKERROW, J. H. & GARCIA, C. T. (2000). Upregulation of the secretory pathway in cysteine protease inhibitor-resistant Trypanosoma cruzi. Journal of Cell Science 113, 1345-1354.
27. FERREIRA, L. R., ABRANTES, E. F., RODRIGUES, C. V., CAETANO, B., CERQUEIRA, G. C., SALIM, A. C., REIS, L. F. & GAZZINELLI, R. T. (2002). Identification and characterization of a novel mouse gene encoding a Ras-associated guanine nucleotide exchange factor: expression in macrophages and myocarditis elicited by Trypanosoma cruzi parasites. Journal of Leukocyte Biology 72, 1215-1227.
28. FINLAY, B. B. & FALKOW, S. (1997). Common themes in microbial pathogenicity revisited. Microbiology and Molecular Biology Reviews 61, 136-169.
29. FRAGOSO, S. P., MATTEI, D., HINES, J. C., RAY, D. & GOLDENBERG, S. (1998). Expression and cellular localization of Trypanosoma cruzi type II DNA topoisomerase. Molecular and Biochemical Parasitology 94, 197-204.
30. FRAGOSO, S. P., PLAZANET-MENUT, C., CARREIRA, M. A., MOTTA, M. C., DALLAGIOVANA, B., KRIEGER, M. A. & GOLDENBERG, S. (2003). Cloning and characterization of a gene encoding a putative protein associated with U3 small nucleolar ribonucleoprotein in Trypanosoma cruzi. Molecular and Biochemical Parasitology 126, 113-117.
31. FREVERT, U., SCHENKMAN, S. & NUSSENZWEIG, V. (1992). Stage-specific expression and intracellular shedding of the cell surface trans-sialidase of Trypanosoma cruzi. Infection and Immunity 60, 2349-2360.
32. GARG, N., POPOV, V. L. & PAPACONSTANTINOU, J. (2003). Profiling gene transcription reveals a deficiency of mitochondrial oxidative phosphorylation in Trypanosoma cruzi-infected murine hearts: implications in chagasic myocarditis development. Biochimica et Biophysica Acta 1638, 106-120.
33. GONCALVES, M. F., UMEZAWA, E. S., KATZIN, A. M., DE SOUZA, W., ALVES, M. J., ZINGALES, B. & COLLI, W. (1991). Trypanosoma cruzi: shedding of surface antigens as membrane vesicles. Experimental Parasitology 72, 43-53.
34. GRELLIER, P., VENDEVILLE, S., JOYEAU, R., BASTOS, I. M., DROBECQ, H., FRAPPIER, F., TEIXEIRA, A. R., SCHREVEL, J., DAVIOUD-CHARVET, E., SERGHERAERT, C. & SANTANA, J. M. (2001). Trypanosoma cruzi prolyl oligopeptidase Tc80 is involved in nonphagocytic mammalian cell invasion by trypomastigotes. Journal of Biological Chemistry 276, 47078-47086.
35. GROTENDORST, G. R. (1997). Connective tissue growth factor: a mediator of TGF-beta action on fibroblasts. Cytokine Growth Factor Reviews 8, 171-179.
36. HEUSSLER, V. T., KUENZI, P. & ROTTENBERG, S. (2001). Inhibition of apoptosis by intracellular protozoan parasites. International Journal for Parasitology 31, 1166-1176.
37. IGARASHI, A., NASHIRO, K., KIKUCHI, K., SATO, S., IHN, H., FUJIMOTO, M., GROTENDORST, G. R. & TAKEHARA, K. (1996). Connective tissue growth factor gene expression in tissue sections from localized scleroderma, keloid, and other fibrotic skin disorders. Journal of Investigative Dermatology 106, 729-733.
38. KESPER, N. Jr., DE ALMEIDA, K. A., STOLF, A. M. & UMEZAWA, E. S. (2000). Immunoblot analysis of trypomastigote excreted-secreted antigens as a tool for the characterization of Trypanosoma cruzi strains and isolates. Journal of Parasitology 86, 862-867.
39. LIMA, E. C., GARCIA, I., VICENTELLI, M. H., VASSALLI, P. & MINOPRIO, P. (1997). Evidence for a protective role of tumor necrosis factor in the acute phase of Trypanosoma cruzi infection in mice. Infection and Immunity 65, 457-465.
40. MAGDESIAN, M. H., GIORDANO, R., ULRICH, H., JULIANO, M. A., JULIANO, L., SCHUMACHER, R. I., COLLI, W. & ALVES, M. J. (2001). Infection by Trypanosoma cruzi. Identification of a parasite ligand and its host cell receptor. Journal of Biological Chemistry 276, 19382-19389.
41. MATSUI, H., SUZUKI, K., HASUMI, M., KOIKE, H., OKUGI, H., NAKAZATO, H. & YAMANAKA, H. (2003). Gene expression profiles of human BPH (II): Optimization of laser-capture microdissection and utilization of cDNA microarray. Anticancer Research 23, 195-200.
42. MICHAILOWSKY, V., SILVA, N. M., ROCHA, C. D., VIEIRA, L. Q., LANNES-VIEIRA, J. & GAZZINELLI, R. T. (2001). Pivotal role of interleukin-12 and interferon-gamma axis in controlling tissue parasitism and inflammation in the heart and central nervous system during Trypanosoma cruzi infection. American Journal of Pathology 159, 1723-1733.
43. MINNING, T. A., BUA, J., GARCIA, G. A., MCGRAW, R. A. & TARLETON, R. L. (2003). Microarray profiling of gene expression during trypomastigote to amastigote transition in Trypanosoma cruzi. Molecular and Biochemical Parasitology 131, 55-64.
44. MUKHERJEE, S., BELBIN, T. J., SPRAY, D. C., IACOBAS, D. A., WEISS, L. M., KITSIS, R. N., WITTNER, M., JELICKS, L. A., SCHERER, P. E., DING, A. & TANOWITZ, H. B. (2003). Microarray analysis of changes in gene expression in a murine model of chronic chagasic cardiomyopathy. Parasitology Research 91, 187-196.
45. NAU, G. J., RICHMOND, J. F., SCHLESINGER, A., JENNINGS, E. G., LANDER, E. S. & YOUNG, R. A. (2002). Human macrophage activation programs induced by bacterial pathogens. Proceedings of the National Academy of Sciences, USA 99, 1503-1508.
46. NGUYEN, V. T. & BENVENISTE, E. N. (2000). Involvement of STAT-1 and its family members in interferon-gamma induction of CD40 transcription in microglia/macrophages. Journal of Biological Chemistry 275, 23674-23684.
47. NOZAKI, T., ENGEL, J. C. & DVORAK, J. A. (1996). Cellular and molecular biological analyses of nifurtimox resistance in Trypanosoma cruzi. American Journal of Tropical Medicine and Hygiene 55, 111-117.
48. OHYAMA, H., ZHANG, X., KOHNO, Y., ALEVIZOS, I., POSNER, M., WONG, D. T. & TODD, R. (2000). Laser capture microdissection-generated target sample for high-density oligonucleotide array hybridization. Biotechniques 29, 530-536.
49. SANTOS, M. A., GARG, N. & TARLETON, R. L. (1997). The identification and molecular characterization of Trypanosoma cruzi amastigote surface protein-1, a member of the trans-sialidase gene super-family. Molecular and Biochemical Parasitology 86, 1-11.
50. SCHARFSTEIN, J., SCHMITZ, V., MORANDI, V., CAPELLA, M. M., LIMA, A. P., MORROT, A., JULIANO, L. & MULLER-ESTERL, W. (2000). Host cell invasion by Trypanosoma cruzi is potentiated by activation of bradykinin B(2) receptors. Journal of Experimental Medicine 192, 1289-1300.
51. SIMMS, R. W. & KORN, J. H. (2002). Cytokine directed therapy in scleroderma: rationale, current status, and the future. Current Opinion in Rheumatology 14, 717-722.
52. TARDIEUX, I., WEBSTER, P., RAVESLOOT, J., BORON, W., LUNN, J. A., HEUSER, J. E. & ANDREWS, N. W. (1992). Lysosome recruitment and fusion are early events required for trypanosome invasion of mammalian cells. Cell 71, 1117-1130.
53. TARLETON, R. L., GRUSBY, M. J., POSTAN, M. & GLIMCHER, L. H. (1996). Trypanosoma cruzi infection in MHC-deficient mice: further evidence for the role of both class I- and class II-restricted T cells in immune resistance and disease. International Immunology 8, 13-22.
54. URBINA, J. A. & DOCAMPO, R. (2003). Specific chemotherapy of Chagas disease: controversies and advances. Trends in Parasitology 19, 495-501.
55. VIKSTROM, K. L., BOHLMEYER, T., FACTOR, S. M. & LEINWAND, L. A. (1998). Hypertrophy, pathology, and molecular markers of cardiac pathogenesis. Circulation Research 82, 773-778.
56. WESTON, D., PATEL, B. & VAN VOORHIS, W. C. (1999). Virulence in Trypanosoma cruzi infection correlates with the expression of a distinct family of sialidase superfamily genes. Molecular and Biochemical Parasitology 98, 105-116.
57. WOOLSEY, A. M., SUNWOO, L., PETERSEN, C. A., BRACHMANN, S. M., CANTLEY, L. C. & BURLEIGH, B. A. (2003). Novel PI 3-kinase-dependent mechanisms of trypanosome invasion and vacuole maturation. Journal of Cell Science 116, 3611-3622.
58. YOSHIDA, N., FAVORETO, S. Jr., FERREIRA, A. T. & MANQUE, P. M. (2000). Signal transduction induced in Trypanosoma cruzi metacyclic trypomastigotes during the invasion of mammalian cells. Brazilian Journal of Medicine and Biological Research 33, 269-278.