Gene expression profiling reveals molecularly and clinically distinct subtypes of glioblastoma multiforme

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 16, 2005, Pages 5814-5819

  Liang, Yu ^a,b   Diehn, Maximilian ^c   Watson, Nathan ^e   Bollen, Andrew W ^a   Aldape, Ken D ^d   Nicholas, M Kelly ^b   Lamborn, Kathleen R ^b   Berger, Mitchel S ^b   Botstein, David ^c   Brown, Patrick O ^c   Israel, Mark A ^e  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d UNIVERSITY OF TEXAS   (United States)

^e DARTMOUTH MEDICAL SCHOOL   (United States)

Author keywords

Brain; FABP7; Glioma; Prognosis; Tumor

Indexed keywords

FABP7 PROTEIN; PROTEIN; UNCLASSIFIED DRUG;

ANGIOGENESIS; ARTICLE; BRAIN TUMOR; CELL INFILTRATION; CELL MOTILITY; CONTROLLED STUDY; DNA MICROARRAY; EXTRACELLULAR MATRIX; GENE EXPRESSION; GENE EXPRESSION PROFILING; GLIOBLASTOMA; GLIOMA; HISTOLOGY; HISTOPATHOLOGY; HUMAN; HUMAN CELL; HUMAN TISSUE; IMMUNOCOMPETENT CELL; MICROSATELLITE INSTABILITY; OLIGODENDROGLIA; PRIORITY JOURNAL; PROGNOSIS; SURVIVAL;

ANOXIA; BRAIN NEOPLASMS; CARRIER PROTEINS; CELL LINE; CELL MOVEMENT; CELL PROLIFERATION; COMPUTATIONAL BIOLOGY; GENE EXPRESSION PROFILING; GLIOBLASTOMA; HUMANS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SURVIVAL RATE; TUMOR SUPPRESSOR PROTEINS;

EID: 20244387732     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0402870102     Document Type: Article

References (45)

1. Lacroix, M., Abi-Said, D., Fourney, D. R., Gokaslan, Z. L., Shi, W., DcMonte, F., Lang, F. F., McCutcheon, I. E., Hassenbusch, S. J., Holland, E., et al. (2001) J. Neurosurg. 95, 190-198.
2. Kleihues, P., Louis, D. N., Scheithauer, B. W., Rorke, L. B., Reifenberger, G., Burger, P. C. & Cavenee, W. K. (2002) J. Neuropathol. Exp. Neurol. 61, 215-225; discussion 226-229.
3. Nagane, M., Huang, H. J. & Cavenee, W. K. (1997) Curr. Opin. Oncol. 9, 215-222.
4. Alizadeh, A. A., Eisen, M. B., Davis, R. E., Ma, C., Lossos, I. S., Rosenwald, A., Boldrick, J. C. Sabet, H., Tran, T., Yu, X., et al. (2000) Nature 403, 503-511.
5. Perou, C. M., Sorlie, T., Eisen, M. B., van de Rijn, M., Jeffrey, S. S., Rees, C. A., Pollack, J. R., Ross, D. T., Johnsen, H., Akslen, L. A., et al. (2000) Nature 406, 747-752.
6. Watson, M. A., Perry, A., Budhjara, V., Hicks, C., Shannon, W. D. & Rich, K. M. (2001) Cancer Res. 61, 1825-1829.
7. Fuller, G. N., Rhee, C. H., Hess, K. R., Caskey, L. S., Wang, R., Bruner, J. M., Yung, W. K. & Zhang, W. (1999) Cancer Res. 59, 4228-4232.
8. Sallinen, S. L., Sallinen, P. K., Haapasalo, H. K., Helin, H. J, Helen, P. T., Schraml, P., Kallioniemi, O. P. & Kononen, J. (2000) Cancer Res. 60, 6617-6622.
9. Rickman, D. S., Bobek, M. P., Misek, D. E., Kuick, R., Blaivas, M., Kurnit, D. M., Taylor, J. & Hanash, S. M. (2001) Cancer Res. 61, 6885-6891.
10. Hunter, S., Young, A., Olson, J., Brat, D. J., Bowers, G., Wilcox, J. N., Jaye, D., Mendrinos, S. & Neish, A. (2002) J. Neuropathol Exp. Neurol. 61, 275-281.
11. Shai, R, Shi, T., Kremen, T. J., Horvath, S., Liau, L. M., Cloughesy, T. F., Mischel, P. S. & Nelson, S. F. (2003) Oncogene 22, 4918-4923.
12. Godard, S., Getz, G., Delorenzi, M., Farmer, P., Kobayashi, H., Desbaillets, I., Nozaki, M., Diserens, A. C., Hamou, M. F., Dietrich, P. Y., et al. (2003) Cancer Res. 63, 6613-6625.
13. van den Boom, J, Wolter, M., Kuick, R., Misek, D. E., Youkilis, A. S., Wechsler, D. S., Sommer, C., Reifenberger, G. & Hanash, S. M. (2003) Am. J. Pathol. 163, 1033-1043.
14. Nutt, C. L., Mani, D. R., Betensky, R. A., Tamayo, P., Cairncross, J. G., Ladd, C., Pohl, U., Hartmann, C., McLaughlin, M. E., Batchelor, T. T., et al. (2003) Cancer Res. 63, 1602-1607.
15. Mukasa, A., Ucki, K., Matsumoto, S., Tsutsumi, S., Nishikawa, R., Fujimaki, T., Asai, A., Kirino, T. & Aburatani, H. (2002) Oncogene 21, 3961-3968.
16. Mischel, P. S., Shai, R., Shi, T., Horvath, S., Lu, K. V., Choe, G., Seligson, D., Kremen, T. J., Palotie, A., Liau, L. M., et al. (2003) Oncogene 22, 2361-2373.
17. Huang, H., Colella, S., Kurrer, M, Yonekawa, Y., Kleihucs, P. & Ohgaki, H. (2000) Cancer Res. 60, 6868-6874.
18. Ljubimova, J. Y., Lakhter, A. J., Loksh, A., Yong, W. H., Riedinger, M. S., Miner, J. H., Sorokin, L. M., Ljubimov, A. V. & Black, K. L. (2001) Cancer Res. 61, 5601-5610.
19. Markert, J. M., Fuller, C. M., Gillespie, G. Y., Bubien, J. K., McLean, L. A., Hong, R. L., Lee, K., Gullans, S. R., Mapstone, T. B. & Benos, D. J. (2001) Physiol. Genom. 5, 21-33.
20. MacDonald, T. J., Brown, K. M., LaFleur, B., Peterson, K., Lawlor, C., Chen, Y., Packer, R.J., Cogen, P. & Stephan, D.A. (2001) Nat. Genet. 29, 143-152.
21. Pomeroy, S. L., Tamayo, P., Gaasenbeek, M., Sturla, L. M., Angelo, M., McLaughlin, M. E., Kim, J. Y., Goumnerova, L. C., Black, P. M., Lau, C., et al. (2002) Nature 415, 436-442.
22. Eisen, M. B., Spellman, P. T., Brown, P. O. & Botstein, D. (1998) Proc. Natl. Acad. Sci. USA 95, 14863-14868.
23. Simmons, M. L., Lamborn, K. R., Takahashi, M., Chen, P., Israel, M. A., Berger, M. S., Godfrey, T., Nigro, J., Prados, M., Chang, S., et al. (2001) Cancer Res. 61, 1122-1128.
24. Feng, I., Hatten, M. E. & Heintz, N. (1994) Neuron 12, 895-908.
25. Godhout, R., Bisgrove, D. A., Shkolny, D. & Day, R. S., III (1998) Oncogene 16, 1955-1962.
26. Lu, Q. R., Park, J. K., Noll, E., Chan, J. A., Alberta, J., Yuk, D., Alzamora, M. G., Louis, D. N., Stiles, C. D., Rowitch, D. H., et al. (2001) Proc. Natl. Acad. Sci. USA 98, 10851-10856.
27. Chen, X., Cheung, S. T., So, S., Fan, S. T., Barry, C., Higgins, J., Lai, K. M., Ji, J., Dudoit, S., Ng, I. O., et al. (2002) Mol. Biol. Cell 13, 1929-1939.
28. Jung, V., Romeike, B. F., Henn, W., Feiden, W., Moringlane, J. R., Zang, K. D. & Urbsehat, S. (1999) J. Neuropathol. Exp. Neurol. 58, 993-999.
29. Burger, P. C. & Kleihues, P. (1989) Cancer 63, 2014-2023.
30. Ricciardi-Castagnoli, P. & Granucci, F. (2002) Nat. Rev. Immunol. 2, 881-889.
31. Graeber, M. B., Seheithauer, B. W. & Kreutzberg, G. W. (2002) Glia 40, 252-259.
32. Roggendorf, W., Strupp, S. & Paulus, W. (1996) Acta Neuropathol. 92, 288-293.
33. Nishic, A., Ono, M., Shono, T., Fukushi, J., Otsubo, M., Onoue, H., Ito, Y., Inamura, T., Ikezaki, K., Fukui, M., et al. (1999) Clin. Cancer Res. 5, 1107-1113.
34. Crowther, M., Brown, N. J., Bishop, E. T. & Lewis, C. E. (2001) J. Leukocyte Biol. 70, 478-490.
35. Ziemer, L. S., Koch, C. J., Maity, A., Magarelli, D. P., Horan, A. M. & Evans, S. M. (2001) Neoplasm 3, 500-508.
36. Chintala, S. K., Sawaya, R., Gokaslan, Z. L., Fuller, G. & Rao, J. S. (1996) Cancer Lett. 101, 107-114.
37. St Croix, B., Rago, C., Velculescu, V., Traverso, G., Romans, K. E., Montgomery, E., Lal, A., Riggins, G. J., Lengauer, C., Vogelstein, B., et al. (2000) Science 289, 1197-1202.
38. Whitfield, M. L., Sherlock, G., Saldanha, A. J., Murray, J. I., Ball, C. A., Alexander, K. E., Matese, J. C., Perou, C. M., Hurt, M. M., Brown, P. O., et al. (2002) Mol. Biol. Cell 13, 1977-2000.
39. Diehn, M., Sherlock, G., Binkley, G., Jin, H., Matese, J. C., Hernandez-Boussard, T., Rees, C. A., Cherry, J. M., Botstein, D., Brown, P. O., et al. (2003) Nucleic Acids Res. 31, 219-223.
40. Shimizu, F., Watanabe, T. K., Shinomiya, H., Nakamura, Y. & Fujiwara, T. (1997) Biochim. Biophys. Acta 1354, 24-28.
41. Grumet, M., Friedlander, D. R. & Sakurai, T. (1996) Perspect. Dev. Neurobiol. 319-342.
42. Nutt, C. L., Matthews, R. T. & Hockfield, S. (2001) Neuroscientist 7, 113-122.
43. Wang, L. H. & Strittmatter, S. M. (1996) J. Neurosci. 16, 6197-6207.
44. Zheng, C., Heintz, N. & Hatten, M. E. (1996) Science 272, 417-419.
45. Null, C. L., Zerillo, C. A., Kelly, G. M. & Hockfield, S. (2001) Cancer Res. 61, 7056-7059.