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Volumn 79, Issue 12, 2005, Pages 7803-7811

Allosteric effects of ligands and mutations on poliovirus RNA-dependent RNA polymerase

Author keywords

[No Author keywords available]

Indexed keywords

POLYPEPTIDE; PRIMER RNA; RNA POLYMERASE; UNCLASSIFIED DRUG; VIRUS PROTEIN; VIRUS RNA; VPG PROTEIN;

EID: 19944383820     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.12.7803-7811.2005     Document Type: Article
Times cited : (21)

References (44)
  • 1
    • 0032846191 scopus 로고    scopus 로고
    • Requirement for RNA replication of a poliovirus replicon by coxsackievirus B3 RNA polymerase
    • Bell, Y. C., B. L. Semler, and E. Ehrenfeld. 1999. Requirement for RNA replication of a poliovirus replicon by coxsackievirus B3 RNA polymerase. J. Virol. 73:9413-9421.
    • (1999) J. Virol. , vol.73 , pp. 9413-9421
    • Bell, Y.C.1    Semler, B.L.2    Ehrenfeld, E.3
  • 2
    • 0033579380 scopus 로고    scopus 로고
    • Structure of a transcribing T7 RNA polymerase initiation complex
    • Cheetham, G. M. T., and T. A. Steitz. 1999. Structure of a transcribing T7 RNA polymerase initiation complex. Science 286:2305-2309.
    • (1999) Science , vol.286 , pp. 2305-2309
    • Cheetham, G.M.T.1    Steitz, T.A.2
  • 3
    • 8644223574 scopus 로고    scopus 로고
    • Strand-specific RNA synthesis determinants in the RNA-dependent RNA polymerase of poliovirus
    • Cornell, C. T., R. Perera, J. E. Brunner, and B. L. Semler. 2004. Strand-specific RNA synthesis determinants in the RNA-dependent RNA polymerase of poliovirus. J. Virol. 78:4397-4407.
    • (2004) J. Virol. , vol.78 , pp. 4397-4407
    • Cornell, C.T.1    Perera, R.2    Brunner, J.E.3    Semler, B.L.4
  • 4
    • 4143072386 scopus 로고    scopus 로고
    • Complete three-dimensional structures of picornaviral RNA-dependent RNA polymerases
    • Crowder, S., and K. Kirkegaard. 2004. Complete three-dimensional structures of picornaviral RNA-dependent RNA polymerases. Structure 12:1336-1339.
    • (2004) Structure , vol.12 , pp. 1336-1339
    • Crowder, S.1    Kirkegaard, K.2
  • 5
    • 0026674174 scopus 로고
    • Electrophoresis, autoradiography and electroblotting of peptides: T4 gene 60 hopping
    • Dayhuff, T. J., R. F. Gesteland, and J. F. Atkins. 1992. Electrophoresis, autoradiography and electroblotting of peptides: T4 gene 60 hopping. BioTechniques 13:500-503.
    • (1992) BioTechniques , vol.13 , pp. 500-503
    • Dayhuff, T.J.1    Gesteland, R.F.2    Atkins, J.F.3
  • 6
    • 8744222695 scopus 로고    scopus 로고
    • Structure of foot-and-mouth disease virus RNA-dependent RNA polymerase and its complex with a template-primer RNA
    • Ferrer-Orta, C., A. Arias, R. Perez-Luque, C. Escarmis, E. Domingo, and N. Verdaguer. 2004. Structure of foot-and-mouth disease virus RNA-dependent RNA polymerase and its complex with a template-primer RNA. J. Biol. Chem. 279:47212-47221.
    • (2004) J. Biol. Chem. , vol.279 , pp. 47212-47221
    • Ferrer-Orta, C.1    Arias, A.2    Perez-Luque, R.3    Escarmis, C.4    Domingo, E.5    Verdaguer, N.6
  • 8
    • 0025773028 scopus 로고
    • Role of a viral membrane polypeptide in strand-specific initiation of poliovirus RNA synthesis
    • Giachetti, C., and B. L. Semler. 1991. Role of a viral membrane polypeptide in strand-specific initiation of poliovirus RNA synthesis. J. Virol. 65:2647-2654.
    • (1991) J. Virol. , vol.65 , pp. 2647-2654
    • Giachetti, C.1    Semler, B.L.2
  • 10
    • 0041351978 scopus 로고    scopus 로고
    • The poliovirus 2C cis-acting replication element-mediated uridylylation of VPg is not required for synthesis of negative-sense genomes
    • Goodfellow, I., C. Polacek, R. Andino, and D. J. Evans. 2003. The poliovirus 2C cis-acting replication element-mediated uridylylation of VPg is not required for synthesis of negative-sense genomes. J. Gen. Virol. 84:2359-2363.
    • (2003) J. Gen. Virol. , vol.84 , pp. 2359-2363
    • Goodfellow, I.1    Polacek, C.2    Andino, R.3    Evans, D.J.4
  • 11
    • 0037276580 scopus 로고    scopus 로고
    • Structure and function analysis of the poliovirus cis-acting replication element (CRE)
    • Goodfellow, I. G., D. Kerrigan, and D. J. Evans. 2003. Structure and function analysis of the poliovirus cis-acting replication element (CRE). RNA 9: 124-137.
    • (2003) RNA , vol.9 , pp. 124-137
    • Goodfellow, I.G.1    Kerrigan, D.2    Evans, D.J.3
  • 12
    • 0031571638 scopus 로고    scopus 로고
    • Structure of the RNA-dependent RNA polymerase of poliovirus
    • Hansen, J. L., A. M. Long, and S. C. Schultz. 1997. Structure of the RNA-dependent RNA polymerase of poliovirus. Structure 5:1109-1122.
    • (1997) Structure , vol.5 , pp. 1109-1122
    • Hansen, J.L.1    Long, A.M.2    Schultz, S.C.3
  • 13
    • 0037080611 scopus 로고    scopus 로고
    • Cooperative kinetics of both Hsp104 ATPase domains and interdomain communication revealed by AAA sensor-1 mutants
    • Hattendorf, D., and S. L. Lindquist. 2002. Cooperative kinetics of both Hsp104 ATPase domains and interdomain communication revealed by AAA sensor-1 mutants. EMBO J. 21:12-21.
    • (2002) EMBO J. , vol.21 , pp. 12-21
    • Hattendorf, D.1    Lindquist, S.L.2
  • 15
    • 0030732120 scopus 로고    scopus 로고
    • Genetic dissection of interaction between poliovirus 3D polymerase and viral protein 3AB
    • Hope, D. A., S. E. Diamond, and K. Kirkegaard. 1997. Genetic dissection of interaction between poliovirus 3D polymerase and viral protein 3AB. J. Virol. 71:9490-9498.
    • (1997) J. Virol. , vol.71 , pp. 9490-9498
    • Hope, D.A.1    Diamond, S.E.2    Kirkegaard, K.3
  • 16
    • 0032573488 scopus 로고    scopus 로고
    • Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: Implications for drug resistance
    • Huang, H., R. Chopra, G. L. Verdine, and S. C. Harrison. 1998. Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance. Science 282:1669-1675.
    • (1998) Science , vol.282 , pp. 1669-1675
    • Huang, H.1    Chopra, R.2    Verdine, G.L.3    Harrison, S.C.4
  • 17
    • 0026693137 scopus 로고
    • Crystal structure at 3.5 A of HIV-1 reverse transcriptase complexes with an inhibitor
    • Kohlstaedt, L. A., J. Wang, J. M. Friedman, P. A. Rice, and T. A. Steitz. 1992. Crystal structure at 3.5 A of HIV-1 reverse transcriptase complexes with an inhibitor. Science 256:1783-1790.
    • (1992) Science , vol.256 , pp. 1783-1790
    • Kohlstaedt, L.A.1    Wang, J.2    Friedman, J.M.3    Rice, P.A.4    Steitz, T.A.5
  • 18
    • 0026458560 scopus 로고
    • Inducible expression of a toxic poliovirus membrane protein in Escherichia coli: Comparative studies using different expression systems based on T7 promoters
    • Lama, J., and L. Carrasco. 1992. Inducible expression of a toxic poliovirus membrane protein in Escherichia coli: Comparative studies using different expression systems based on T7 promoters. Biochem. Biophys. Res. Commun. 188:972-981.
    • (1992) Biochem. Biophys. Res. Commun. , vol.188 , pp. 972-981
    • Lama, J.1    Carrasco, L.2
  • 19
    • 0027979233 scopus 로고
    • Properties of purified recombinatnt poliovirus protein 3AB as substrate for viral proteinases and as cofactor for RNA polymerase 3Dpol
    • Lama, J., A. V. Paul, K. S. Harris, and E. Wimmer. 1994. Properties of purified recombinatnt poliovirus protein 3AB as substrate for viral proteinases and as cofactor for RNA polymerase 3Dpol. J. Biol. Chem. 269:66-70.
    • (1994) J. Biol. Chem. , vol.269 , pp. 66-70
    • Lama, J.1    Paul, A.V.2    Harris, K.S.3    Wimmer, E.4
  • 20
  • 21
    • 0037150679 scopus 로고    scopus 로고
    • Visualization and functional analysis of RNA-dependent RNA polymerase lattices
    • Lyle, J. M., E. Bullitt, K. Bienz, and K. Kirkegaard. 2002. Visualization and functional analysis of RNA-dependent RNA polymerase lattices. Science 296:2218-2222.
    • (2002) Science , vol.296 , pp. 2218-2222
    • Lyle, J.M.1    Bullitt, E.2    Bienz, K.3    Kirkegaard, K.4
  • 22
    • 0037013317 scopus 로고    scopus 로고
    • Similar structural basis for membrane localization and protein priming by an RNA-dependent RNA polymerase
    • Lyle, J. M., A. Clewell, K. Richmond, O. C. Richards, D. A. Hope, S. C. Schultz, and K. Kirkegaard. 2002. Similar structural basis for membrane localization and protein priming by an RNA-dependent RNA polymerase. J. Biol. Chem. 277:16324-16331.
    • (2002) J. Biol. Chem. , vol.277 , pp. 16324-16331
    • Lyle, J.M.1    Clewell, A.2    Richmond, K.3    Richards, O.C.4    Hope, D.A.5    Schultz, S.C.6    Kirkegaard, K.7
  • 23
    • 0036776467 scopus 로고    scopus 로고
    • Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus
    • Mason, P. W., S. V. Bezboradova, and T. M. Henry. 2002. Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus. J. Virol. 76: 9686-9694.
    • (2002) J. Virol. , vol.76 , pp. 9686-9694
    • Mason, P.W.1    Bezboradova, S.V.2    Henry, T.M.3
  • 24
    • 0031762554 scopus 로고    scopus 로고
    • The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication
    • McKnight, K. L., and S. M. Lemon. 1998. The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication. RNA 4:1569-1584.
    • (1998) RNA , vol.4 , pp. 1569-1584
    • McKnight, K.L.1    Lemon, S.M.2
  • 25
    • 0037405928 scopus 로고    scopus 로고
    • Poliovirus cre(2C)-dependent syntheiss of VPgpUpU is required for positive- but not negative-strand RNA synthesis
    • Morasco, B. J., N. Sharma, J. Parilla, and J. B. Flanegan. 2003. Poliovirus cre(2C)-dependent syntheiss of VPgpUpU is required for positive- but not negative-strand RNA synthesis. J. Virol. 77:5136-5144.
    • (2003) J. Virol. , vol.77 , pp. 5136-5144
    • Morasco, B.J.1    Sharma, N.2    Parilla, J.3    Flanegan, J.B.4
  • 26
    • 0037383425 scopus 로고    scopus 로고
    • Poliovirus CRE-dependent VPg uridylyation is required for positive-strand RNA synthesis but not for negative-strand RNA synthesis
    • Murray, K. E., and D. J. Barton. 2003. Poliovirus CRE-dependent VPg uridylyation is required for positive-strand RNA synthesis but not for negative-strand RNA synthesis. J. Virol. 77:4739-4750.
    • (2003) J. Virol. , vol.77 , pp. 4739-4750
    • Murray, K.E.1    Barton, D.J.2
  • 27
    • 0026325741 scopus 로고
    • Purification, characterization and comparison of poliovirus RNA polymerase from native and recombinant sources
    • Neufeld, K. L., O. C. Richards, and E. Ehrenfeld. 1991. Purification, characterization and comparison of poliovirus RNA polymerase from native and recombinant sources. J. Biol. Chem. 266:24212-24219.
    • (1991) J. Biol. Chem. , vol.266 , pp. 24212-24219
    • Neufeld, K.L.1    Richards, O.C.2    Ehrenfeld, E.3
  • 28
    • 0025939363 scopus 로고
    • Improved method for detecting poliovirus minus strands used to demonstrate specificity of positive-strand encapsidation and the ratio of positive to minus strands in infected cells
    • Novak, J. E., and K. Kirkegaard. 1991. Improved method for detecting poliovirus minus strands used to demonstrate specificity of positive-strand encapsidation and the ratio of positive to minus strands in infected cells. J. Virol. 65:3384-3387.
    • (1991) J. Virol. , vol.65 , pp. 3384-3387
    • Novak, J.E.1    Kirkegaard, K.2
  • 29
    • 0030820403 scopus 로고    scopus 로고
    • Poly(rC) binding protein 2 forms a ternary complex with the 5′ -terminal sequences of poliovirus RNA and the viral proteinase
    • Parsley, T. B., J. S. Towner, L. B. Blyn, E. Ehrenfeld, and B. L. Semler. 1997. Poly(rC) binding protein 2 forms a ternary complex with the 5′ -terminal sequences of poliovirus RNA and the viral proteinase. RNA 3:1124-1134.
    • (1997) RNA , vol.3 , pp. 1124-1134
    • Parsley, T.B.1    Towner, J.S.2    Blyn, L.B.3    Ehrenfeld, E.4    Semler, B.L.5
  • 30
    • 0029330222 scopus 로고
    • Functional oligomerization of poliovirus RNA-dependent RNA polymerase
    • Pata, J. D., S. C. Schultz, and K. Kirkegaard. 1995. Functional oligomerization of poliovirus RNA-dependent RNA polymerase. RNA 1:466-477.
    • (1995) RNA , vol.1 , pp. 466-477
    • Pata, J.D.1    Schultz, S.C.2    Kirkegaard, K.3
  • 31
    • 0037200001 scopus 로고    scopus 로고
    • Structure-function relationships of the RNA-dependent RNA polymerase from poliovirus (3Dpol): A surface of the primary oligomerization domain functions in capsid precursor processing and VPg uridylylation
    • Pathak, H. B., S. Kumar, B. Ghosh, A. W. Roberts, S. D. Sharma, J. D. Yoder, J. J. Arnold, D. W. Gohara, D. J. Barton, A. V. Paul, and C. E. Cameron. 2002. Structure-function relationships of the RNA-dependent RNA polymerase from poliovirus (3Dpol): a surface of the primary oligomerization domain functions in capsid precursor processing and VPg uridylylation. J. Biol. Chem. 277:31551-31562.
    • (2002) J. Biol. Chem. , vol.277 , pp. 31551-31562
    • Pathak, H.B.1    Kumar, S.2    Ghosh, B.3    Roberts, A.W.4    Sharma, S.D.5    Yoder, J.D.6    Arnold, J.J.7    Gohara, D.W.8    Barton, D.J.9    Paul, A.V.10    Cameron, C.E.11
  • 32
    • 0037223676 scopus 로고    scopus 로고
    • Biochemical and genetic studies of the VPg uridylylation reaction catalyzed by the RNA polymerase of poliovirus
    • Paul, A. V., J. Peters, J. Mugavero, J. Yin, J. H. van Boom, and E. Wimmer. 2003. Biochemical and genetic studies of the VPg uridylylation reaction catalyzed by the RNA polymerase of poliovirus. J. Virol. 77:891-904.
    • (2003) J. Virol. , vol.77 , pp. 891-904
    • Paul, A.V.1    Peters, J.2    Mugavero, J.3    Yin, J.4    Van Boom, J.H.5    Wimmer, E.6
  • 33
    • 0033766003 scopus 로고    scopus 로고
    • Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg
    • Paul, A. V., E. Rieder, D. W. Kim, J. H. van Boom, and E. Wimmer. 2000. Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg. J. Virol. 74:10359-10370.
    • (2000) J. Virol. , vol.74 , pp. 10359-10370
    • Paul, A.V.1    Rieder, E.2    Kim, D.W.3    Van Boom, J.H.4    Wimmer, E.5
  • 34
    • 0032554886 scopus 로고    scopus 로고
    • Protein-primed RNA synthesis by purified poliovirus RNA polymerase
    • Paul, A. V., J. H. van Boom, D. Fillippov, and E. Wimmer. 1998. Protein-primed RNA synthesis by purified poliovirus RNA polymerase. Nature 393: 280-284.
    • (1998) Nature , vol.393 , pp. 280-284
    • Paul, A.V.1    Van Boom, J.H.2    Fillippov, D.3    Wimmer, E.4
  • 35
    • 0033755326 scopus 로고    scopus 로고
    • Genetic and biochemical studies of poliovirus cis-acting replication element ere in relation to VPg uridylylation
    • Rieder, E., A. V. Paul, D. W. Kim, J. H. van Boom, and E. Wimmer. 2000. Genetic and biochemical studies of poliovirus cis-acting replication element ere in relation to VPg uridylylation. J. Virol. 74:10371-10380.
    • (2000) J. Virol. , vol.74 , pp. 10371-10380
    • Rieder, E.1    Paul, A.V.2    Kim, D.W.3    Van Boom, J.H.4    Wimmer, E.5
  • 37
    • 0023472472 scopus 로고
    • Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
    • Schagger, H., and G. von Jagow. 1987. Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Analyt. Biochem. 166:368-379.
    • (1987) Analyt. Biochem. , vol.166 , pp. 368-379
    • Schagger, H.1    Von Jagow, G.2
  • 38
    • 0003518480 scopus 로고
    • John Wiley & Sons, New York, N.Y.
    • Segel, I. H. 1975. Enzyme kinetics. John Wiley & Sons, New York, N.Y.
    • (1975) Enzyme Kinetics
    • Segel, I.H.1
  • 39
    • 0242492645 scopus 로고    scopus 로고
    • Strand-specific RNA synthesis defects in a poliovirus with a mutation in protein 3A
    • Teterina, N. L., M. S. Rinaudo, and E. Ehrenfeld. 2003. Strand-specific RNA synthesis defects in a poliovirus with a mutation in protein 3A. J. Virol. 77: 12679-12691.
    • (2003) J. Virol. , vol.77 , pp. 12679-12691
    • Teterina, N.L.1    Rinaudo, M.S.2    Ehrenfeld, E.3
  • 40
    • 4644238112 scopus 로고    scopus 로고
    • Structural basis for proteolysis-dependent activation of the poliovirus RNA-dependent RNA polymerase
    • Thompson, A. A., and O. B. Peersen. 2004. Structural basis for proteolysis-dependent activation of the poliovirus RNA-dependent RNA polymerase. EMBO J. 23:3462-3471.
    • (2004) EMBO J. , vol.23 , pp. 3462-3471
    • Thompson, A.A.1    Peersen, O.B.2
  • 41
  • 43
    • 1842424947 scopus 로고    scopus 로고
    • Genetic evidence for an interaction between a picornaviral cis-acting RNA replication element and 3CD protein
    • Yang, Y., R. Rijnbrand, S. Watowich, and S. M. Lemon. 2004. Genetic evidence for an interaction between a picornaviral cis-acting RNA replication element and 3CD protein. J. Biol. Chem. 279:12659-12667.
    • (2004) J. Biol. Chem. , vol.279 , pp. 12659-12667
    • Yang, Y.1    Rijnbrand, R.2    Watowich, S.3    Lemon, S.M.4
  • 44
    • 0037405787 scopus 로고    scopus 로고
    • Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: Analysis of single-and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA
    • Yin, J., A. V. Paul, E. Wimmer, and E. Rieder. 2003. Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: analysis of single-and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA. J. Virol. 77:5152-5166.
    • (2003) J. Virol. , vol.77 , pp. 5152-5166
    • Yin, J.1    Paul, A.V.2    Wimmer, E.3    Rieder, E.4


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